RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 BFARQ9NZS9 450 aa17.15■□□□□ 0.34
SCARNA2-201ENST00000458748 FAM8A1Q9UBU6 413 aa17.15■□□□□ 0.34
SCARNA2-201ENST00000458748 KLHL3Q9UH77 587 aa17.15■□□□□ 0.34
SCARNA2-201ENST00000458748 AHCTF1Q8WYP5 2266 aa17.14■□□□□ 0.33
SCARNA2-201ENST00000458748 GOLGA6L10A0A0M3HER8 536 aa17.14■□□□□ 0.33
SCARNA2-201ENST00000458748 ERVH48-1M5A8F1 160 aa17.14■□□□□ 0.33
SCARNA2-201ENST00000458748 RASSF9O75901 435 aa17.14■□□□□ 0.33
SCARNA2-201ENST00000458748 C9P02748 559 aa17.14■□□□□ 0.33
SCARNA2-201ENST00000458748 FTH1P02794 183 aa17.14■□□□□ 0.33
SCARNA2-201ENST00000458748 TYRP1P17643 537 aa17.14■□□□□ 0.33
SCARNA2-201ENST00000458748 NPY2RP49146 381 aa17.14■□□□□ 0.33
SCARNA2-201ENST00000458748 ATP1A2P50993 1020 aa17.14■□□□□ 0.33
SCARNA2-201ENST00000458748 PRAMEP78395 509 aa17.14■□□□□ 0.33
SCARNA2-201ENST00000458748 C19orf57Q0VDD7 668 aa17.14■□□□□ 0.33
SCARNA2-201ENST00000458748 RPA4Q13156 261 aa17.14■□□□□ 0.33
SCARNA2-201ENST00000458748 AARS2Q5JTZ9 985 aaKnown RBP17.14■□□□□ 0.33
SCARNA2-201ENST00000458748 PCID2Q5JVF3 399 aa17.14■□□□□ 0.33
SCARNA2-201ENST00000458748 TSTD2Q5T7W7 516 aa17.14■□□□□ 0.33
SCARNA2-201ENST00000458748 PCSK4Q6UW60 755 aa17.14■□□□□ 0.33
SCARNA2-201ENST00000458748 CEACAM20Q6UY09 585 aa17.14■□□□□ 0.33
SCARNA2-201ENST00000458748 FAM83HQ6ZRV2 1179 aaPredicted RBP17.14■□□□□ 0.33
SCARNA2-201ENST00000458748 ART4Q93070 314 aa17.14■□□□□ 0.33
SCARNA2-201ENST00000458748 WBP1Q96G27 269 aa17.14■□□□□ 0.33
SCARNA2-201ENST00000458748 C9orf72Q96LT7 481 aa17.14■□□□□ 0.33
SCARNA2-201ENST00000458748 TSSK1BQ9BXA7 367 aa17.14■□□□□ 0.33
SCARNA2-201ENST00000458748 RAB33BQ9H082 229 aa17.14■□□□□ 0.33
SCARNA2-201ENST00000458748 WWP1Q9H0M0 922 aa17.14■□□□□ 0.33
SCARNA2-201ENST00000458748 FBXO8Q9NRD0 319 aa17.14■□□□□ 0.33
SCARNA2-201ENST00000458748 SMARCAL1Q9NZC9 954 aa17.14■□□□□ 0.33
SCARNA2-201ENST00000458748 FOXJ2Q9P0K8 574 aa17.14■□□□□ 0.33
SCARNA2-201ENST00000458748 EPHA6Q9UF33 1036 aa17.14■□□□□ 0.33
SCARNA2-201ENST00000458748 TTC7AQ9ULT0 858 aaPredicted RBP17.14■□□□□ 0.33
SCARNA2-201ENST00000458748 CCDC78A2IDD5 438 aa17.13■□□□□ 0.33
SCARNA2-201ENST00000458748 PGRMC1O00264 195 aaKnown RBP17.13■□□□□ 0.33
SCARNA2-201ENST00000458748 CAPN5O15484 640 aaPredicted RBP17.13■□□□□ 0.33
SCARNA2-201ENST00000458748 POLBP06746 335 aa17.13■□□□□ 0.33
SCARNA2-201ENST00000458748 OR56A5P0C7T3 313 aa17.13■□□□□ 0.33
SCARNA2-201ENST00000458748 ZSCAN5DPP0CG00 497 aa17.13■□□□□ 0.33
SCARNA2-201ENST00000458748 MC2RQ01718 297 aa17.13■□□□□ 0.33
SCARNA2-201ENST00000458748 PLOD1Q02809 727 aaPredicted RBP17.13■□□□□ 0.33
SCARNA2-201ENST00000458748 FASTKD1Q53R41 847 aaKnown RBP17.13■□□□□ 0.33
SCARNA2-201ENST00000458748 ARMC3Q5W041 872 aa17.13■□□□□ 0.33
SCARNA2-201ENST00000458748 ARMC6Q6NXE6 501 aa17.13■□□□□ 0.33
SCARNA2-201ENST00000458748 IRGCQ6NXR0 463 aa17.13■□□□□ 0.33
SCARNA2-201ENST00000458748 PACS1Q6VY07 963 aa17.13■□□□□ 0.33
SCARNA2-201ENST00000458748 DTX1Q86Y01 620 aa17.13■□□□□ 0.33
SCARNA2-201ENST00000458748 RASGEF1CQ8N431 466 aa17.13■□□□□ 0.33
SCARNA2-201ENST00000458748 ZSCAN1Q8NBB4 408 aa17.13■□□□□ 0.33
SCARNA2-201ENST00000458748 OR6P1Q8NGX9 317 aa17.13■□□□□ 0.33
SCARNA2-201ENST00000458748 OR4L1Q8NH43 312 aa17.13■□□□□ 0.33
SCARNA2-201ENST00000458748 HDAC10Q969S8 669 aa17.13■□□□□ 0.33
SCARNA2-201ENST00000458748 TGM7Q96PF1 710 aa17.13■□□□□ 0.33
SCARNA2-201ENST00000458748 TCAF1Q9Y4C2 921 aa17.13■□□□□ 0.33
SCARNA2-201ENST00000458748 CCDC162PA2VCL2 907 aa17.12■□□□□ 0.33
SCARNA2-201ENST00000458748 TPSB2P20231 275 aa17.12■□□□□ 0.33
SCARNA2-201ENST00000458748 KCNJ1P48048 391 aa17.12■□□□□ 0.33
SCARNA2-201ENST00000458748 CD151P48509 253 aa17.12■□□□□ 0.33
SCARNA2-201ENST00000458748 CDKN1CP49918 316 aaPredicted RBP17.12■□□□□ 0.33
SCARNA2-201ENST00000458748 TPSAB1Q15661 275 aa17.12■□□□□ 0.33
SCARNA2-201ENST00000458748 DBN1Q16643 649 aa17.12■□□□□ 0.33
SCARNA2-201ENST00000458748 MANEAQ5SRI9 462 aa17.12■□□□□ 0.33
SCARNA2-201ENST00000458748 PRSS42Q7Z5A4 293 aa17.12■□□□□ 0.33
SCARNA2-201ENST00000458748 PRUNE1Q86TP1 453 aa17.12■□□□□ 0.33
SCARNA2-201ENST00000458748 OOSP2Q86WS3 158 aa17.12■□□□□ 0.33
SCARNA2-201ENST00000458748 ZFAND4Q86XD8 727 aa17.12■□□□□ 0.33
SCARNA2-201ENST00000458748 BMPERQ8N8U9 685 aa17.12■□□□□ 0.33
SCARNA2-201ENST00000458748 PRELID2Q8N945 189 aa17.12■□□□□ 0.33
SCARNA2-201ENST00000458748 GLIS1Q8NBF1 620 aa17.12■□□□□ 0.33
SCARNA2-201ENST00000458748 OR13J1Q8NGT2 312 aa17.12■□□□□ 0.33
SCARNA2-201ENST00000458748 MAGOHBQ96A72 148 aaKnown RBP17.12■□□□□ 0.33
SCARNA2-201ENST00000458748 SGSM3Q96HU1 749 aa17.12■□□□□ 0.33
SCARNA2-201ENST00000458748 INSM2Q96T92 566 aaPredicted RBP17.12■□□□□ 0.33
SCARNA2-201ENST00000458748 CD180Q99467 661 aa17.12■□□□□ 0.33
SCARNA2-201ENST00000458748 COG4Q9H9E3 785 aa17.12■□□□□ 0.33
SCARNA2-201ENST00000458748 OCIAD1Q9NX40 245 aa17.12■□□□□ 0.33
SCARNA2-201ENST00000458748 OGFRQ9NZT2 677 aa17.12■□□□□ 0.33
SCARNA2-201ENST00000458748 SDK2Q58EX2 2172 aa17.11■□□□□ 0.33
SCARNA2-201ENST00000458748 GCN1Q92616 2671 aaKnown RBP17.11■□□□□ 0.33
SCARNA2-201ENST00000458748 MATN2O00339 956 aa17.11■□□□□ 0.33
SCARNA2-201ENST00000458748 LIN7AO14910 233 aaPredicted RBP17.11■□□□□ 0.33
SCARNA2-201ENST00000458748 POLR1CO15160 346 aaPredicted RBP17.11■□□□□ 0.33
SCARNA2-201ENST00000458748 PFDN6O15212 129 aa17.11■□□□□ 0.33
SCARNA2-201ENST00000458748 SGTAO43765 313 aa17.11■□□□□ 0.33
SCARNA2-201ENST00000458748 KDM1AO60341 852 aa17.11■□□□□ 0.33
SCARNA2-201ENST00000458748 FOXN2P32314 431 aa17.11■□□□□ 0.33
SCARNA2-201ENST00000458748 GRIA1P42261 906 aa17.11■□□□□ 0.33
SCARNA2-201ENST00000458748 ARL4DP49703 201 aa17.11■□□□□ 0.33
SCARNA2-201ENST00000458748 GFERP55789 205 aa17.11■□□□□ 0.33
SCARNA2-201ENST00000458748 SESN2P58004 480 aaPredicted RBP17.11■□□□□ 0.33
SCARNA2-201ENST00000458748 ACVR1Q04771 509 aa17.11■□□□□ 0.33
SCARNA2-201ENST00000458748 PRKAA1Q13131 559 aa17.11■□□□□ 0.33
SCARNA2-201ENST00000458748 TGIF1Q15583 401 aa17.11■□□□□ 0.33
SCARNA2-201ENST00000458748 TAF1BQ53T94 588 aaPredicted RBP17.11■□□□□ 0.33
SCARNA2-201ENST00000458748 CACHD1Q5VU97 1274 aa17.11■□□□□ 0.33
SCARNA2-201ENST00000458748 REXO1L1PQ8IX06 675 aa17.11■□□□□ 0.33
SCARNA2-201ENST00000458748 PIANPQ8IYJ0 282 aa17.11■□□□□ 0.33
SCARNA2-201ENST00000458748 GPR150Q8NGU9 434 aa17.11■□□□□ 0.33
SCARNA2-201ENST00000458748 GRK7Q8WTQ7 553 aa17.11■□□□□ 0.33
SCARNA2-201ENST00000458748 UBXN4Q92575 508 aa17.11■□□□□ 0.33
SCARNA2-201ENST00000458748 ZNF768Q9H5H4 540 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms