RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 SOX11P35716 441 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 ACVRL1P37023 503 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 MAPK8P45983 427 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 GNPDA1P46926 289 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 OR1G1P47890 313 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 KCNC1P48547 511 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 TMED10P49755 219 aaKnown RBP3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 ST13P50502 369 aaKnown RBP3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 OR4D2P58180 307 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 MTPNP58546 118 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 RHOAP61586 193 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 RPL38P63173 70 aaKnown RBP3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 CSNK2BP67870 215 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 IL5RAQ01344 420 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 GSTM4Q03013 218 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 VAC14Q08AM6 782 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 MGAT3Q09327 533 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 ABRQ12979 859 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 BNIP3Q12983 259 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 SEMA3AQ14563 771 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 DSC3Q14574 896 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 PLCL1Q15111 1095 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 TAF1CQ15572 869 aaPredicted RBP3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 TAF12Q16514 161 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 DDR2Q16832 855 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 DPY19L1Q2PZI1 675 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 AP5B1Q2VPB7 878 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 PLA2G4EQ3MJ16 856 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 ZIK1Q3SY52 487 aaPredicted RBP3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 ALFQ53S48 1182 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 ZC3H12BQ5HYM0 836 aaKnown RBP3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 FGD3Q5JSP0 725 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 PAGE3Q5JUK9 113 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 GNASQ5JWF2 1037 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 PRAMEF19Q5SWL8 479 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 C6orf141Q5SZD1 244 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 SPRYD7Q5W111 196 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 ATG9BQ674R7 924 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 SULT1C3Q6IMI6 304 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 GDF6Q6KF10 455 aaPredicted RBP3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 ANKRD26P1Q6NSI1 321 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 ERICH5Q6P6B1 374 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 GALNT18Q6P9A2 607 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 SLC2A7Q6PXP3 512 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 CRTC3Q6UUV7 619 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 SPESP1Q6UW49 350 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 SCIMPQ6UWF3 145 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 DLK2Q6UY11 383 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 CYHR1Q6ZMK1 362 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 ZNF783Q6ZMS7 281 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 DCDC5Q6ZRR9 648 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 FAM43BQ6ZT52 329 aaPredicted RBP3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 LRRC70Q7Z2Q7 622 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 GOLGA7Q7Z5G4 137 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 R3HCC1LQ7Z5L2 792 aaKnown RBP3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 METTL3Q86U44 580 aaKnown RBP3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 SLCO6A1Q86UG4 719 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 LRRTM3Q86VH5 581 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 HORMAD1Q86X24 394 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 RALGPS2Q86X27 583 aaPredicted RBP3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 ANKRD13BQ86YJ7 626 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 PLD3Q8IV08 490 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 ZC3H7AQ8IWR0 971 aaKnown RBP3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 RIMKLAQ8IXN7 391 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 CPNE9Q8IYJ1 553 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 KIAA2013Q8IYS2 634 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 ZNF683Q8IZ20 524 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 ABI1Q8IZP0 508 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 RBFAQ8N0V3 343 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 CENPSQ8N2Z9 138 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 PGBD5Q8N414 524 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 DTWD1Q8N5C7 304 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 ZNF513Q8N8E2 541 aaPredicted RBP3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 ARL10Q8N8L6 244 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 SIDT2Q8NBJ9 832 aaKnown RBP3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 PIK3C3Q8NEB9 887 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 BPIFB6Q8NFQ5 453 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 NLGN2Q8NFZ4 835 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 PJA1Q8NG27 643 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 OR7A2PQ8NGA2 310 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 FBXO30Q8TB52 745 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 CD200R1Q8TD46 325 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 CHPT1Q8WUD6 406 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 PPP1R13LQ8WUF5 828 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 UBTD2Q8WUN7 234 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 IPCEF1Q8WWN9 437 aaPredicted RBP3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 OVCA2Q8WZ82 227 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 SNX19Q92543 992 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 FCGR1BQ92637 280 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 NELL1Q92832 810 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 GLMNQ92990 594 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 IGSF8Q969P0 613 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 MUL1Q969V5 352 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 ZNF566Q969W8 418 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 TAMM41Q96BW9 452 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 PLD4Q96BZ4 506 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 MYO19Q96H55 970 aa3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 PDLIM5Q96HC4 596 aaKnown RBP3.28□□□□□ -1.88
HMGN1P18-201ENST00000457642 ZNF419Q96HQ0 510 aaPredicted RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms