RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 PHACTR1Q9C0D0 580 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 OSGEPL1Q9H4B0 414 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 SAYSD1Q9NPB0 183 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 FAM114A2Q9NRY5 505 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 C20orf96Q9NUD7 363 aaPredicted RBP9.86□□□□□ -0.83
ATG4A-206ENST00000457035 MOCS1Q9NZB8 636 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 ZNF624Q9P2J8 865 aaPredicted RBP9.86□□□□□ -0.83
ATG4A-206ENST00000457035 LRIT1Q9P2V4 623 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 ACSL5Q9ULC5 683 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 ZMIZ1Q9ULJ6 1067 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 APOBEC2Q9Y235 224 aaKnown RBP9.86□□□□□ -0.83
ATG4A-206ENST00000457035 WDR37Q9Y2I8 494 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 FRYQ5TBA9 3013 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 SNRNP200O75643 2136 aaKnown RBP9.85□□□□□ -0.83
ATG4A-206ENST00000457035 SPTBP11277 2137 aa9.85□□□□□ -0.83
ATG4A-206ENST00000457035 KIR2DS5A0A0G2JLQ3 304 aa9.85□□□□□ -0.83
ATG4A-206ENST00000457035 A0A0G2JNG1 304 aa9.85□□□□□ -0.83
ATG4A-206ENST00000457035 IQCF5A8MTL0 148 aa9.85□□□□□ -0.83
ATG4A-206ENST00000457035 KIR2DS3K7RE56 304 aa9.85□□□□□ -0.83
ATG4A-206ENST00000457035 QSOX1O00391 747 aa9.85□□□□□ -0.83
ATG4A-206ENST00000457035 CASC3O15234 703 aaKnown RBP9.85□□□□□ -0.83
ATG4A-206ENST00000457035 NUDT21O43809 227 aaKnown RBP9.85□□□□□ -0.83
ATG4A-206ENST00000457035 RFPL3O75679 317 aa9.85□□□□□ -0.83
ATG4A-206ENST00000457035 F7P08709 466 aaPredicted RBP9.85□□□□□ -0.83
ATG4A-206ENST00000457035 GSTM1P09488 218 aa9.85□□□□□ -0.83
ATG4A-206ENST00000457035 OR56A5P0C7T3 313 aa9.85□□□□□ -0.83
ATG4A-206ENST00000457035 CDK4P11802 303 aa9.85□□□□□ -0.83
ATG4A-206ENST00000457035 GABRB3P28472 473 aa9.85□□□□□ -0.83
ATG4A-206ENST00000457035 PBLDP30039 288 aaPredicted RBP9.85□□□□□ -0.83
ATG4A-206ENST00000457035 FASLGP48023 281 aa9.85□□□□□ -0.83
ATG4A-206ENST00000457035 LEPRP48357 1165 aaKnown RBP9.85□□□□□ -0.83
ATG4A-206ENST00000457035 E2F1Q01094 437 aa9.85□□□□□ -0.83
ATG4A-206ENST00000457035 GSTM4Q03013 218 aa9.85□□□□□ -0.83
ATG4A-206ENST00000457035 KIR2DS5Q14953 304 aa9.85□□□□□ -0.83
ATG4A-206ENST00000457035 DNTTIP2Q5QJE6 756 aaKnown RBP9.85□□□□□ -0.83
ATG4A-206ENST00000457035 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.85□□□□□ -0.83
ATG4A-206ENST00000457035 TEDDM1Q5T9Z0 273 aa9.85□□□□□ -0.83
ATG4A-206ENST00000457035 CAPRIN2Q6IMN6 1127 aaKnown RBP9.85□□□□□ -0.83
ATG4A-206ENST00000457035 TRMT10BQ6PF06 316 aaKnown RBP9.85□□□□□ -0.83
ATG4A-206ENST00000457035 EFL1Q7Z2Z2 1120 aaKnown RBP9.85□□□□□ -0.83
ATG4A-206ENST00000457035 ZNF438Q7Z4V0 828 aa9.85□□□□□ -0.83
ATG4A-206ENST00000457035 KCNMB4Q86W47 210 aa9.85□□□□□ -0.83
ATG4A-206ENST00000457035 LRRC6Q86X45 466 aa9.85□□□□□ -0.83
ATG4A-206ENST00000457035 CNTN4Q8IWV2 1026 aa9.85□□□□□ -0.83
ATG4A-206ENST00000457035 HM13Q8TCT9 377 aa9.85□□□□□ -0.83
ATG4A-206ENST00000457035 CALML6Q8TD86 181 aa9.85□□□□□ -0.83
ATG4A-206ENST00000457035 SLC37A2Q8TED4 501 aa9.85□□□□□ -0.83
ATG4A-206ENST00000457035 PYROXD1Q8WU10 500 aa9.85□□□□□ -0.83
ATG4A-206ENST00000457035 ADAMTS14Q8WXS8 1223 aa9.85□□□□□ -0.83
ATG4A-206ENST00000457035 NAT6Q93015 286 aa9.85□□□□□ -0.83
ATG4A-206ENST00000457035 CERS2Q96G23 380 aa9.85□□□□□ -0.83
ATG4A-206ENST00000457035 CFAP36Q96G28 342 aa9.85□□□□□ -0.83
ATG4A-206ENST00000457035 SCNM1Q9BWG6 230 aa9.85□□□□□ -0.83
ATG4A-206ENST00000457035 IARS2Q9NSE4 1012 aaKnown RBP9.85□□□□□ -0.83
ATG4A-206ENST00000457035 EVA1BQ9NVM1 165 aa9.85□□□□□ -0.83
ATG4A-206ENST00000457035 INTS10Q9NVR2 710 aaKnown RBP9.85□□□□□ -0.83
ATG4A-206ENST00000457035 FBXO5Q9UKT4 447 aa9.85□□□□□ -0.83
ATG4A-206ENST00000457035 CRYL1Q9Y2S2 319 aa9.85□□□□□ -0.83
ATG4A-206ENST00000457035 RNF215Q9Y6U7 377 aa9.85□□□□□ -0.83
ATG4A-206ENST00000457035 PRAMEF33A0A0G2JMD5 474 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 SLC5A10A0PJK1 596 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 PFDN6O15212 129 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 B4GAT1O43505 415 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 OPA1O60313 960 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 GPC4O75487 556 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 HAUS5O94927 633 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 AHSGP02765 367 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 FTH1P02794 183 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 SLC2A4P14672 509 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 AOAHP28039 575 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 PDHA2P29803 388 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 ECHS1P30084 290 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 SSTR1P30872 391 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 FMO4P31512 558 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 CCR7P32248 378 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 SLC1A2P43004 574 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 MAGEA4P43358 317 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 CARSP49589 748 aaKnown RBP9.84□□□□□ -0.83
ATG4A-206ENST00000457035 GPX6P59796 221 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 UBE2IP63279 158 aaKnown RBP9.84□□□□□ -0.83
ATG4A-206ENST00000457035 NR1D2Q14995 579 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 SEPT7Q16181 437 aaKnown RBP9.84□□□□□ -0.83
ATG4A-206ENST00000457035 CCDC157Q569K6 752 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 CTSL3PQ5NE16 218 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 RNF187Q5TA31 235 aaPredicted RBP9.84□□□□□ -0.83
ATG4A-206ENST00000457035 ZNF470Q6ECI4 717 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 DHRS13Q6UX07 377 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 NAPRTQ6XQN6 538 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 CYS1Q717R9 158 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 RAB44Q7Z6P3 723 aaPredicted RBP9.84□□□□□ -0.83
ATG4A-206ENST00000457035 SLC9B2Q86UD5 537 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 PALM2Q8IXS6 379 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 KRT222Q8N1A0 295 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 CHCHD4Q8N4Q1 142 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 OTUD6BQ8N6M0 293 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 C2CD4AQ8NCU7 369 aaPredicted RBP9.84□□□□□ -0.83
ATG4A-206ENST00000457035 GSDMBQ8TAX9 411 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 MAPK15Q8TD08 544 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 LKAAEAR1Q8TD35 194 aa9.84□□□□□ -0.83
ATG4A-206ENST00000457035 IFT81Q8WYA0 676 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms