RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	WDR37	Q9Y2I8	494 aa		12.85	□□□□□ -0.35
SNHG17-208	ENST00000456953	PADI2	Q9Y2J8	665 aa		12.85	□□□□□ -0.35
SNHG17-208	ENST00000456953	TTLL3	Q9Y4R7	772 aa		12.85	□□□□□ -0.35
SNHG17-208	ENST00000456953	PCDHA13	Q9Y5I0	950 aa		12.85	□□□□□ -0.35
SNHG17-208	ENST00000456953	SEC16A	O15027	2179 aa		12.85	□□□□□ -0.35
SNHG17-208	ENST00000456953	PIKFYVE	Q9Y2I7	2098 aa		12.85	□□□□□ -0.35
SNHG17-208	ENST00000456953	OR5K3	A6NET4	321 aa		12.84	□□□□□ -0.35
SNHG17-208	ENST00000456953	ANKRD66	B4E2M5	251 aa		12.84	□□□□□ -0.35
SNHG17-208	ENST00000456953	ATMIN	O43313	823 aa	Predicted RBP	12.84	□□□□□ -0.35
SNHG17-208	ENST00000456953	CDK14	O94921	469 aa		12.84	□□□□□ -0.35
SNHG17-208	ENST00000456953	LCA5L	O95447	670 aa		12.84	□□□□□ -0.35
SNHG17-208	ENST00000456953	IGHE	P01854	428 aa		12.84	□□□□□ -0.35
SNHG17-208	ENST00000456953	PCK1	P35558	622 aa		12.84	□□□□□ -0.35
SNHG17-208	ENST00000456953	PLCL1	Q15111	1095 aa		12.84	□□□□□ -0.35
SNHG17-208	ENST00000456953	QPCT	Q16769	361 aa		12.84	□□□□□ -0.35
SNHG17-208	ENST00000456953	SMTNL2	Q2TAL5	461 aa		12.84	□□□□□ -0.35
SNHG17-208	ENST00000456953	BOLA3	Q53S33	107 aa		12.84	□□□□□ -0.35
SNHG17-208	ENST00000456953	ALS2CL	Q60I27	953 aa		12.84	□□□□□ -0.35
SNHG17-208	ENST00000456953	GDF7	Q7Z4P5	450 aa		12.84	□□□□□ -0.35
SNHG17-208	ENST00000456953	C11orf96	Q7Z7L8	435 aa		12.84	□□□□□ -0.35
SNHG17-208	ENST00000456953	MRGPRE	Q86SM8	312 aa		12.84	□□□□□ -0.35
SNHG17-208	ENST00000456953	CUZD1	Q86UP6	607 aa		12.84	□□□□□ -0.35
SNHG17-208	ENST00000456953	KCNMB4	Q86W47	210 aa		12.84	□□□□□ -0.35
SNHG17-208	ENST00000456953	SYTL1	Q8IYJ3	562 aa		12.84	□□□□□ -0.35
SNHG17-208	ENST00000456953	GALNT16	Q8N428	558 aa		12.84	□□□□□ -0.35
SNHG17-208	ENST00000456953	TRAM1L1	Q8N609	369 aa		12.84	□□□□□ -0.35
SNHG17-208	ENST00000456953	ACRBP	Q8NEB7	543 aa		12.84	□□□□□ -0.35
SNHG17-208	ENST00000456953	GPR150	Q8NGU9	434 aa		12.84	□□□□□ -0.35
SNHG17-208	ENST00000456953	ARRDC2	Q8TBH0	407 aa		12.84	□□□□□ -0.35
SNHG17-208	ENST00000456953	FATE1	Q969F0	183 aa		12.84	□□□□□ -0.35
SNHG17-208	ENST00000456953	EID2B	Q96D98	161 aa		12.84	□□□□□ -0.35
SNHG17-208	ENST00000456953	TRIM44	Q96DX7	344 aa	Predicted RBP	12.84	□□□□□ -0.35
SNHG17-208	ENST00000456953	DESI2	Q9BSY9	194 aa		12.84	□□□□□ -0.35
SNHG17-208	ENST00000456953	ADGRE3	Q9BY15	652 aa		12.84	□□□□□ -0.35
SNHG17-208	ENST00000456953	THAP2	Q9H0W7	228 aa		12.84	□□□□□ -0.35
SNHG17-208	ENST00000456953	ZFYVE1	Q9HBF4	777 aa		12.84	□□□□□ -0.35
SNHG17-208	ENST00000456953	RAD18	Q9NS91	495 aa		12.84	□□□□□ -0.35
SNHG17-208	ENST00000456953	HRASLS2	Q9NWW9	162 aa		12.84	□□□□□ -0.35
SNHG17-208	ENST00000456953	MYO1A	Q9UBC5	1043 aa		12.84	□□□□□ -0.35
SNHG17-208	ENST00000456953	NENF	Q9UMX5	172 aa		12.84	□□□□□ -0.35
SNHG17-208	ENST00000456953	BTRC	Q9Y297	605 aa		12.84	□□□□□ -0.35
SNHG17-208	ENST00000456953	PCSK5	Q92824	1860 aa		12.84	□□□□□ -0.35
SNHG17-208	ENST00000456953	MED13L	Q71F56	2210 aa		12.83	□□□□□ -0.36
SNHG17-208	ENST00000456953		C9J4A7	227 aa		12.83	□□□□□ -0.36
SNHG17-208	ENST00000456953	E2F3	O00716	465 aa		12.83	□□□□□ -0.36
SNHG17-208	ENST00000456953	MATN3	O15232	486 aa		12.83	□□□□□ -0.36
SNHG17-208	ENST00000456953	KCNJ13	O60928	360 aa		12.83	□□□□□ -0.36
SNHG17-208	ENST00000456953	MTX2	O75431	263 aa		12.83	□□□□□ -0.36
SNHG17-208	ENST00000456953	TMEM253	P0C7T8	217 aa		12.83	□□□□□ -0.36
SNHG17-208	ENST00000456953	IL1R2	P27930	398 aa		12.83	□□□□□ -0.36
SNHG17-208	ENST00000456953	OTX2	P32243	289 aa		12.83	□□□□□ -0.36
SNHG17-208	ENST00000456953	PTGER4	P35408	488 aa		12.83	□□□□□ -0.36
SNHG17-208	ENST00000456953	HADHA	P40939	763 aa		12.83	□□□□□ -0.36
SNHG17-208	ENST00000456953	NIPAL4	Q0D2K0	466 aa		12.83	□□□□□ -0.36
SNHG17-208	ENST00000456953	ABR	Q12979	859 aa		12.83	□□□□□ -0.36
SNHG17-208	ENST00000456953	LLGL1	Q15334	1064 aa		12.83	□□□□□ -0.36
SNHG17-208	ENST00000456953	RPE65	Q16518	533 aa		12.83	□□□□□ -0.36
SNHG17-208	ENST00000456953	DCAF10	Q5QP82	559 aa		12.83	□□□□□ -0.36
SNHG17-208	ENST00000456953	PRAMEF17	Q5VTA0	474 aa		12.83	□□□□□ -0.36
SNHG17-208	ENST00000456953	TIGD7	Q6NT04	549 aa	Predicted RBP	12.83	□□□□□ -0.36
SNHG17-208	ENST00000456953	TRAPPC5	Q8IUR0	188 aa		12.83	□□□□□ -0.36
SNHG17-208	ENST00000456953	TTC30B	Q8N4P2	665 aa		12.83	□□□□□ -0.36
SNHG17-208	ENST00000456953	GPR26	Q8NDV2	337 aa		12.83	□□□□□ -0.36
SNHG17-208	ENST00000456953	HSPH1	Q92598	858 aa		12.83	□□□□□ -0.36
SNHG17-208	ENST00000456953	LURAP1	Q96LR2	239 aa		12.83	□□□□□ -0.36
SNHG17-208	ENST00000456953	DPH2	Q9BQC3	489 aa	Predicted RBP	12.83	□□□□□ -0.36
SNHG17-208	ENST00000456953	DHRS4	Q9BTZ2	278 aa		12.83	□□□□□ -0.36
SNHG17-208	ENST00000456953	PACSIN1	Q9BY11	444 aa		12.83	□□□□□ -0.36
SNHG17-208	ENST00000456953	KCNF1	Q9H3M0	494 aa		12.83	□□□□□ -0.36
SNHG17-208	ENST00000456953	ZNF552	Q9H707	407 aa	Predicted RBP	12.83	□□□□□ -0.36
SNHG17-208	ENST00000456953	ACTR5	Q9H9F9	607 aa	Predicted RBP	12.83	□□□□□ -0.36
SNHG17-208	ENST00000456953	MRPL47	Q9HD33	250 aa	Known RBP	12.83	□□□□□ -0.36
SNHG17-208	ENST00000456953	PCMTD2	Q9NV79	361 aa		12.83	□□□□□ -0.36
SNHG17-208	ENST00000456953	RBM22	Q9NW64	420 aa	Known RBP eCLIP	12.83	□□□□□ -0.36	1e-6	■■■□□ 15.7
SNHG17-208	ENST00000456953	SOHLH2	Q9NX45	425 aa		12.83	□□□□□ -0.36
SNHG17-208	ENST00000456953	COPG2	Q9UBF2	871 aa		12.83	□□□□□ -0.36
SNHG17-208	ENST00000456953	INTU	Q9ULD6	942 aa		12.83	□□□□□ -0.36
SNHG17-208	ENST00000456953	SPTB	P11277	2137 aa		12.83	□□□□□ -0.36
SNHG17-208	ENST00000456953	SVIL	O95425	2214 aa		12.82	□□□□□ -0.36
SNHG17-208	ENST00000456953	MDC1	Q14676	2089 aa	Known RBP	12.82	□□□□□ -0.36
SNHG17-208	ENST00000456953	PKDREJ	Q9NTG1	2253 aa		12.82	□□□□□ -0.36
SNHG17-208	ENST00000456953		A0A1B0GUH1	482 aa		12.82	□□□□□ -0.36
SNHG17-208	ENST00000456953	CCDC175	P0C221	793 aa		12.82	□□□□□ -0.36
SNHG17-208	ENST00000456953	EDN3	P14138	238 aa		12.82	□□□□□ -0.36
SNHG17-208	ENST00000456953	CYP2A7	P20853	494 aa		12.82	□□□□□ -0.36
SNHG17-208	ENST00000456953	CA5A	P35218	305 aa		12.82	□□□□□ -0.36
SNHG17-208	ENST00000456953	ADCY2	Q08462	1091 aa		12.82	□□□□□ -0.36
SNHG17-208	ENST00000456953	GALNT2	Q10471	571 aa		12.82	□□□□□ -0.36
SNHG17-208	ENST00000456953	ART3	Q13508	389 aa		12.82	□□□□□ -0.36
SNHG17-208	ENST00000456953	KHDC1	Q4VXA5	237 aa	Known RBP	12.82	□□□□□ -0.36
SNHG17-208	ENST00000456953	ARMC6	Q6NXE6	501 aa		12.82	□□□□□ -0.36
SNHG17-208	ENST00000456953	OOSP2	Q86WS3	158 aa		12.82	□□□□□ -0.36
SNHG17-208	ENST00000456953	TLR10	Q9BXR5	811 aa		12.82	□□□□□ -0.36
SNHG17-208	ENST00000456953	SYTL2	Q9HCH5	934 aa		12.82	□□□□□ -0.36
SNHG17-208	ENST00000456953	KLF2	Q9Y5W3	355 aa	Predicted RBP	12.82	□□□□□ -0.36
SNHG17-208	ENST00000456953	SCIN	Q9Y6U3	715 aa		12.82	□□□□□ -0.36
SNHG17-208	ENST00000456953	CNTRL	Q7Z7A1	2325 aa		12.81	□□□□□ -0.36
SNHG17-208	ENST00000456953	PCNX1	Q96RV3	2341 aa		12.81	□□□□□ -0.36
SNHG17-208	ENST00000456953	PEX12	O00623	359 aa		12.81	□□□□□ -0.36
SNHG17-208	ENST00000456953	KLF7	O75840	302 aa	Predicted RBP	12.81	□□□□□ -0.36

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