RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 UBQLNLQ8IYU4 475 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 TRPC4APQ8TEL6 797 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 PEX13Q92968 403 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 PPP1R16BQ96T49 567 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 RETREG1Q9H6L5 497 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 RMND5AQ9H871 391 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 CD320Q9NPF0 282 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 DCDC2Q9UHG0 476 aa4.48□□□□□ -1.69
DEPDC1-202ENST00000456315 NBASA2RRP1 2371 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 NBPF19A0A087WUL8 3843 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 CACNA1HO95180 2353 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 COL11A1P12107 1806 aaPredicted RBP4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 DNAJC13O75165 2243 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 AGAP5A6NIR3 686 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 MEIS3P2A8K0S8 358 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 UBDO15205 165 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 KCNJ13O60928 360 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 CPNE3O75131 537 aaKnown RBP4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 PRKD3O94806 890 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 SEC24AO95486 1093 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 TFPIP10646 304 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 POU3F2P20265 443 aaPredicted RBP4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 FASP25445 335 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 SLC1A2P43004 574 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 CDH18Q13634 790 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 SEMA3AQ14563 771 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 TAB1Q15750 504 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 FAM83EQ2M2I3 478 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 DEFB115Q30KQ5 88 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 GPR158Q5T848 1215 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 CPZQ66K79 652 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 ZYG11AQ6WRX3 759 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 TMEM91Q6ZNR0 172 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 FAM196AQ6ZSG2 479 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 LRRC49Q8IUZ0 686 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 TIGD4Q8IY51 512 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 MINDY1Q8N5J2 469 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 OR7A2PQ8NGA2 310 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 CDK15Q96Q40 435 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 PRKD2Q9BZL6 878 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 TXNRD2Q9NNW7 524 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 SMPD4Q9NXE4 827 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 NEU3Q9UQ49 428 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 SPEF1Q9Y4P9 236 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 COL1A2P08123 1366 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 M0QX08 132 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 KPNA4O00629 521 aaPredicted RBP4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 MPC2O95563 127 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 CXCL14O95715 111 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 PSAPP07602 524 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 ZNF865P0CJ78 1059 aaPredicted RBP4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 PROZP22891 400 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 ATP2B4P23634 1241 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 PTPN3P26045 913 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 CD83Q01151 205 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 PRKAA1Q13131 559 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 DAG1Q14118 895 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 P2RY14Q15391 338 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 TRIP4Q15650 581 aaPredicted RBP4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 SSX1Q16384 188 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 TBRG1Q3YBR2 411 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 ZC3H12BQ5HYM0 836 aaKnown RBP4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 LIN9Q5TKA1 542 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 ACOT1Q86TX2 421 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 AMER2Q8N7J2 671 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 SUN5Q8TC36 379 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 CELF6Q96J87 481 aaKnown RBP4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 ZFYVE19Q96K21 471 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 RMDN3Q96TC7 470 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 KCTD14Q9BQ13 255 aaPredicted RBP4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 MRPL45Q9BRJ2 306 aaKnown RBP4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 FDXACB1Q9BRP7 624 aaPredicted RBP4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 BEGAINQ9BUH8 593 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 TEKT3Q9BXF9 490 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 BCO2Q9BYV7 579 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 DCSTAMPQ9H295 470 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 TCF20Q9UGU0 1960 aaKnown RBP4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 SCN3AQ9NY46 2000 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 POLR2AP24928 1970 aaKnown RBP4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 MEIOCA2RUB1 952 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 AQP12BA6NM10 295 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 C12orf71A8MTZ7 269 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 EEF2KO00418 725 aaKnown RBP4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 PLD2O14939 933 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 SLC26A4O43511 780 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 LINC00032P0C843 101 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 TXNP10599 105 aaKnown RBP4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 HGFP14210 728 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 TACR1P25103 407 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 BST2Q10589 180 aaKnown RBP4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 SEMA3BQ13214 749 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 SKIV2LQ15477 1246 aaKnown RBP4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 PSMD5Q16401 504 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 SAMD4BQ5PRF9 694 aaKnown RBP4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 RSBN1Q5VWQ0 802 aaPredicted RBP4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 PAQR6Q6TCH4 344 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 BHLHA9Q7RTU4 235 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 PID1Q7Z2X4 250 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 VTCN1Q7Z7D3 282 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 AKAP14Q86UN6 197 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms