RNA–Protein interactions for RNA: ENST00000456222.1

SEC22C-213, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-213ENST00000456222 GOLGA6L3A6NEY3 463 aa21.23■□□□□ 0.99
SEC22C-213ENST00000456222 LDB2O43679 373 aa21.23■□□□□ 0.99
SEC22C-213ENST00000456222 POLBP06746 335 aa21.23■□□□□ 0.99
SEC22C-213ENST00000456222 EBLN1P0CF75 366 aa21.23■□□□□ 0.99
SEC22C-213ENST00000456222 PRSS56P0CW18 603 aa21.23■□□□□ 0.99
SEC22C-213ENST00000456222 ARCN1P48444 511 aaKnown RBP21.23■□□□□ 0.99
SEC22C-213ENST00000456222 PWWP2BQ6NUJ5 590 aa21.23■□□□□ 0.99
SEC22C-213ENST00000456222 FBXO38Q6PIJ6 1188 aa21.23■□□□□ 0.99
SEC22C-213ENST00000456222 TMEM135Q86UB9 458 aa21.23■□□□□ 0.99
SEC22C-213ENST00000456222 STAMBPL1Q96FJ0 436 aa21.23■□□□□ 0.99
SEC22C-213ENST00000456222 ZNF514Q96K75 400 aaPredicted RBP21.23■□□□□ 0.99
SEC22C-213ENST00000456222 RUFY1Q96T51 708 aa21.23■□□□□ 0.99
SEC22C-213ENST00000456222 TBL1YQ9BQ87 522 aa21.23■□□□□ 0.99
SEC22C-213ENST00000456222 ZNF71Q9NQZ8 489 aaPredicted RBP21.23■□□□□ 0.99
SEC22C-213ENST00000456222 PACSIN2Q9UNF0 486 aaPredicted RBP21.23■□□□□ 0.99
SEC22C-213ENST00000456222 OR5K3A6NET4 321 aa21.22■□□□□ 0.99
SEC22C-213ENST00000456222 CSRP3P50461 194 aa21.22■□□□□ 0.99
SEC22C-213ENST00000456222 TUBB3Q13509 450 aa21.22■□□□□ 0.99
SEC22C-213ENST00000456222 PRPSAP1Q14558 356 aa21.22■□□□□ 0.99
SEC22C-213ENST00000456222 SKIDA1Q1XH10 827 aa21.22■□□□□ 0.99
SEC22C-213ENST00000456222 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.22■□□□□ 0.99
SEC22C-213ENST00000456222 PPP1R3BQ86XI6 285 aa21.22■□□□□ 0.99
SEC22C-213ENST00000456222 NXPE1Q8N323 547 aa21.22■□□□□ 0.99
SEC22C-213ENST00000456222 SIDT2Q8NBJ9 832 aaKnown RBP21.22■□□□□ 0.99
SEC22C-213ENST00000456222 UBXN4Q92575 508 aa21.22■□□□□ 0.99
SEC22C-213ENST00000456222 DNAJC1Q96KC8 554 aaKnown RBP21.22■□□□□ 0.99
SEC22C-213ENST00000456222 LINC00615Q96LM1 132 aaPredicted RBP21.22■□□□□ 0.99
SEC22C-213ENST00000456222 HRASLS2Q9NWW9 162 aa21.22■□□□□ 0.99
SEC22C-213ENST00000456222 SLC24A2Q9UI40 661 aa21.22■□□□□ 0.99
SEC22C-213ENST00000456222 CRLS1Q9UJA2 301 aa21.22■□□□□ 0.99
SEC22C-213ENST00000456222 TUBD1Q9UJT1 453 aa21.22■□□□□ 0.99
SEC22C-213ENST00000456222 R3HDM2Q9Y2K5 976 aaKnown RBP21.22■□□□□ 0.99
SEC22C-213ENST00000456222 TCRBV7S2A1N4TA0A589 114 aa21.21■□□□□ 0.99
SEC22C-213ENST00000456222 TJP3O95049 919 aa21.21■□□□□ 0.99
SEC22C-213ENST00000456222 METTL18O95568 372 aa21.21■□□□□ 0.99
SEC22C-213ENST00000456222 VAV2P52735 878 aa21.21■□□□□ 0.99
SEC22C-213ENST00000456222 TLE1Q04724 770 aa21.21■□□□□ 0.99
SEC22C-213ENST00000456222 ERV3-1Q14264 604 aa21.21■□□□□ 0.99
SEC22C-213ENST00000456222 CRTC2Q53ET0 693 aaPredicted RBP21.21■□□□□ 0.99
SEC22C-213ENST00000456222 COLEC12Q5KU26 742 aa21.21■□□□□ 0.99
SEC22C-213ENST00000456222 DNTTIP2Q5QJE6 756 aaKnown RBP21.21■□□□□ 0.99
SEC22C-213ENST00000456222 KCTD11Q693B1 232 aa21.21■□□□□ 0.99
SEC22C-213ENST00000456222 CAPRIN2Q6IMN6 1127 aaKnown RBP21.21■□□□□ 0.99
SEC22C-213ENST00000456222 TMEM139Q8IV31 216 aa21.21■□□□□ 0.99
SEC22C-213ENST00000456222 CFAP206Q8IYR0 622 aa21.21■□□□□ 0.99
SEC22C-213ENST00000456222 CT55Q8WUE5 264 aa21.21■□□□□ 0.99
SEC22C-213ENST00000456222 KIR3DX1Q9H7L2 352 aa21.21■□□□□ 0.99
SEC22C-213ENST00000456222 ARNT2Q9HBZ2 717 aa21.21■□□□□ 0.99
SEC22C-213ENST00000456222 PIH1D1Q9NWS0 290 aaKnown RBP21.21■□□□□ 0.99
SEC22C-213ENST00000456222 ACSL5Q9ULC5 683 aa21.21■□□□□ 0.99
SEC22C-213ENST00000456222 SEC16AO15027 2179 aa21.2■□□□□ 0.98
SEC22C-213ENST00000456222 MAST4O15021 2626 aa21.2■□□□□ 0.98
SEC22C-213ENST00000456222 OR6C74A6NCV1 312 aa21.2■□□□□ 0.98
SEC22C-213ENST00000456222 TLCD2A6NGC4 264 aa21.2■□□□□ 0.98
SEC22C-213ENST00000456222 K7EM74 188 aa21.2■□□□□ 0.98
SEC22C-213ENST00000456222 DDX3YO15523 660 aaKnown RBP21.2■□□□□ 0.98
SEC22C-213ENST00000456222 KATNA1O75449 491 aa21.2■□□□□ 0.98
SEC22C-213ENST00000456222 STK10O94804 968 aaKnown RBP21.2■□□□□ 0.98
SEC22C-213ENST00000456222 CRTAMO95727 393 aa21.2■□□□□ 0.98
SEC22C-213ENST00000456222 NTRK1P04629 796 aa21.2■□□□□ 0.98
SEC22C-213ENST00000456222 SLC35G4P0C7Q5 338 aa21.2■□□□□ 0.98
SEC22C-213ENST00000456222 TPH1P17752 444 aa21.2■□□□□ 0.98
SEC22C-213ENST00000456222 PRLHRP49683 370 aa21.2■□□□□ 0.98
SEC22C-213ENST00000456222 KPNA2P52292 529 aaKnown RBP21.2■□□□□ 0.98
SEC22C-213ENST00000456222 GDF10P55107 478 aa21.2■□□□□ 0.98
SEC22C-213ENST00000456222 ZNF658BQ4V348 819 aaPredicted RBP21.2■□□□□ 0.98
SEC22C-213ENST00000456222 FAM71DQ8N9W8 422 aa21.2■□□□□ 0.98
SEC22C-213ENST00000456222 APOBEC4Q8WW27 367 aaKnown RBP21.2■□□□□ 0.98
SEC22C-213ENST00000456222 ABHD17AQ96GS6 310 aa21.2■□□□□ 0.98
SEC22C-213ENST00000456222 FERMT1Q9BQL6 677 aa21.2■□□□□ 0.98
SEC22C-213ENST00000456222 EPN3Q9H201 632 aa21.2■□□□□ 0.98
SEC22C-213ENST00000456222 FGF21Q9NSA1 209 aa21.2■□□□□ 0.98
SEC22C-213ENST00000456222 RARRES3Q9UL19 164 aa21.2■□□□□ 0.98
SEC22C-213ENST00000456222 KCNMB2Q9Y691 235 aa21.2■□□□□ 0.98
SEC22C-213ENST00000456222 MED13Q9UHV7 2174 aa21.2■□□□□ 0.98
SEC22C-213ENST00000456222 DOPEY2Q9Y3R5 2298 aa21.19■□□□□ 0.98
SEC22C-213ENST00000456222 CYSRT1A8MQ03 144 aa21.19■□□□□ 0.98
SEC22C-213ENST00000456222 IPO7O95373 1038 aaKnown RBP21.19■□□□□ 0.98
SEC22C-213ENST00000456222 FTCDO95954 541 aa21.19■□□□□ 0.98
SEC22C-213ENST00000456222 NR1D1P20393 614 aa21.19■□□□□ 0.98
SEC22C-213ENST00000456222 MC4RP32245 332 aa21.19■□□□□ 0.98
SEC22C-213ENST00000456222 MC1RQ01726 317 aa21.19■□□□□ 0.98
SEC22C-213ENST00000456222 DNASE1L3Q13609 305 aa21.19■□□□□ 0.98
SEC22C-213ENST00000456222 GPR19Q15760 415 aa21.19■□□□□ 0.98
SEC22C-213ENST00000456222 FAM199XQ6PEV8 388 aaPredicted RBP21.19■□□□□ 0.98
SEC22C-213ENST00000456222 KLHL35Q6PF15 583 aa21.19■□□□□ 0.98
SEC22C-213ENST00000456222 SNX20Q7Z614 316 aa21.19■□□□□ 0.98
SEC22C-213ENST00000456222 GAS2L3Q86XJ1 694 aa21.19■□□□□ 0.98
SEC22C-213ENST00000456222 D2HGDHQ8N465 521 aa21.19■□□□□ 0.98
SEC22C-213ENST00000456222 TAB3Q8N5C8 712 aaPredicted RBP21.19■□□□□ 0.98
SEC22C-213ENST00000456222 C9orf43Q8TAL5 461 aaPredicted RBP21.19■□□□□ 0.98
SEC22C-213ENST00000456222 DCUN1D1Q96GG9 259 aa21.19■□□□□ 0.98
SEC22C-213ENST00000456222 CALR3Q96L12 384 aaKnown RBP21.19■□□□□ 0.98
SEC22C-213ENST00000456222 COPS8Q99627 209 aa21.19■□□□□ 0.98
SEC22C-213ENST00000456222 DESI2Q9BSY9 194 aa21.19■□□□□ 0.98
SEC22C-213ENST00000456222 LHX9Q9NQ69 397 aa21.19■□□□□ 0.98
SEC22C-213ENST00000456222 PADI1Q9ULC6 663 aa21.19■□□□□ 0.98
SEC22C-213ENST00000456222 LRRK2Q5S007 2527 aa21.19■□□□□ 0.98
SEC22C-213ENST00000456222 IGLV3-16A0A075B6K0 115 aa21.18■□□□□ 0.98
SEC22C-213ENST00000456222 UBA6A0AVT1 1052 aaPredicted RBP21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms