RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 CPLX3Q8WVH0 158 aa7.66□□□□□ -1.18
LINC01961-201ENST00000449954 TMEM158Q8WZ71 300 aa7.66□□□□□ -1.18
LINC01961-201ENST00000449954 KAT5Q92993 513 aa7.66□□□□□ -1.18
LINC01961-201ENST00000449954 SDCCAG3Q96C92 435 aa7.66□□□□□ -1.18
LINC01961-201ENST00000449954 AP2M1Q96CW1 435 aa7.66□□□□□ -1.18
LINC01961-201ENST00000449954 USP28Q96RU2 1077 aa7.66□□□□□ -1.18
LINC01961-201ENST00000449954 LMF1Q96S06 567 aa7.66□□□□□ -1.18
LINC01961-201ENST00000449954 MAP3K3Q99759 626 aa7.66□□□□□ -1.18
LINC01961-201ENST00000449954 OSGEPL1Q9H4B0 414 aa7.66□□□□□ -1.18
LINC01961-201ENST00000449954 SYNCQ9H7C4 482 aa7.66□□□□□ -1.18
LINC01961-201ENST00000449954 SLC40A1Q9NP59 571 aa7.66□□□□□ -1.18
LINC01961-201ENST00000449954 PLCB1Q9NQ66 1216 aa7.66□□□□□ -1.18
LINC01961-201ENST00000449954 GPN3Q9UHW5 284 aaPredicted RBP7.66□□□□□ -1.18
LINC01961-201ENST00000449954 PLEKHA6Q9Y2H5 1048 aa7.66□□□□□ -1.18
LINC01961-201ENST00000449954 ZNF835Q9Y2P0 537 aa7.66□□□□□ -1.18
LINC01961-201ENST00000449954 PRKAB1Q9Y478 270 aa7.66□□□□□ -1.18
LINC01961-201ENST00000449954 E9PLN8 166 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 SEC16AO15027 2179 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 PMM2O15305 246 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 VEGFDO43915 354 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 PRAMEF2O60811 474 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 SOCS5O75159 536 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 MTA2O94776 668 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 LRIG2O94898 1065 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 SLCO2B1O94956 709 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 RASAL1O95294 804 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 MLYCDO95822 493 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 CPP00450 1065 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 ERBB2P04626 1255 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 UNGP13051 313 aaPredicted RBP7.65□□□□□ -1.18
LINC01961-201ENST00000449954 LHCGRP22888 699 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 MST1P26927 711 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 HOXC12P31275 282 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 TNFSF10P50591 281 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 PPP1CAP62136 330 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 ARG2P78540 354 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 ATP11AP98196 1134 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 CETN1Q12798 172 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 STK38Q15208 465 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 C8orf34Q49A92 452 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 PRAMEF17Q5VTA0 474 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 SHC4Q6S5L8 630 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 CERS6Q6ZMG9 384 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 B4GALNT4Q76KP1 1039 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 INTS1Q8N201 2190 aaKnown RBP7.65□□□□□ -1.18
LINC01961-201ENST00000449954 RTL3Q8N8U3 475 aaKnown RBP7.65□□□□□ -1.18
LINC01961-201ENST00000449954 THAP3Q8WTV1 239 aaPredicted RBP7.65□□□□□ -1.18
LINC01961-201ENST00000449954 CCDC47Q96A33 483 aaKnown RBP7.65□□□□□ -1.18
LINC01961-201ENST00000449954 PTERQ96BW5 349 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 DOCK10Q96BY6 2186 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 CXorf40BQ96DE9 158 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 COX4I2Q96KJ9 171 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 VKORC1Q9BQB6 163 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 POLDIP3Q9BY77 421 aaKnown RBP7.65□□□□□ -1.18
LINC01961-201ENST00000449954 LACRTQ9GZZ8 138 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 KLC2Q9H0B6 622 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 NOL6Q9H6R4 1146 aaKnown RBP7.65□□□□□ -1.18
LINC01961-201ENST00000449954 PDFQ9HBH1 243 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 SLC6A20Q9NP91 592 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 GPATCH2LQ9NWQ4 482 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 SOHLH2Q9NX45 425 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 ZNF624Q9P2J8 865 aaPredicted RBP7.65□□□□□ -1.18
LINC01961-201ENST00000449954 NDOR1Q9UHB4 597 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 FBXL4Q9UKA2 621 aa7.65□□□□□ -1.18
LINC01961-201ENST00000449954 PCYT1BQ9Y5K3 369 aaPredicted RBP7.65□□□□□ -1.18
LINC01961-201ENST00000449954 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.64□□□□□ -1.19
LINC01961-201ENST00000449954 CCDC66A2RUB6 948 aa7.64□□□□□ -1.19
LINC01961-201ENST00000449954 PDZK1P1A8MUH7 402 aa7.64□□□□□ -1.19
LINC01961-201ENST00000449954 WASH4PA8MWX3 477 aa7.64□□□□□ -1.19
LINC01961-201ENST00000449954 IDSB3KWA1 339 aa7.64□□□□□ -1.19
LINC01961-201ENST00000449954 GPR89AB7ZAQ6 455 aa7.64□□□□□ -1.19
LINC01961-201ENST00000449954 INAFM1C9JVW0 142 aa7.64□□□□□ -1.19
LINC01961-201ENST00000449954 CTAG2O75638 210 aa7.64□□□□□ -1.19
LINC01961-201ENST00000449954 SMNDC1O75940 238 aaKnown RBP eCLIP7.64□□□□□ -1.19
LINC01961-201ENST00000449954 ZRANB2O95218 330 aaKnown RBP eCLIP7.64□□□□□ -1.19
LINC01961-201ENST00000449954 ATP1A1P05023 1023 aaKnown RBP7.64□□□□□ -1.19
LINC01961-201ENST00000449954 RPLP1P05386 114 aaKnown RBP7.64□□□□□ -1.19
LINC01961-201ENST00000449954 HOXD4P09016 255 aaPredicted RBP7.64□□□□□ -1.19
LINC01961-201ENST00000449954 GPR89BP0CG08 455 aa7.64□□□□□ -1.19
LINC01961-201ENST00000449954 IDSP22304 550 aa7.64□□□□□ -1.19
LINC01961-201ENST00000449954 CDC25BP30305 580 aa7.64□□□□□ -1.19
LINC01961-201ENST00000449954 RGRP47804 291 aa7.64□□□□□ -1.19
LINC01961-201ENST00000449954 FMO5P49326 533 aa7.64□□□□□ -1.19
LINC01961-201ENST00000449954 NSUN2Q08J23 767 aaKnown RBP eCLIP7.64□□□□□ -1.19
LINC01961-201ENST00000449954 SEPT7Q16181 437 aaKnown RBP7.64□□□□□ -1.19
LINC01961-201ENST00000449954 DEFB113Q30KQ7 82 aa7.64□□□□□ -1.19
LINC01961-201ENST00000449954 PTPN20Q4JDL3 420 aa7.64□□□□□ -1.19
LINC01961-201ENST00000449954 ZNF789Q5FWF6 425 aa7.64□□□□□ -1.19
LINC01961-201ENST00000449954 ABRAXAS1Q6UWZ7 409 aa7.64□□□□□ -1.19
LINC01961-201ENST00000449954 USP45Q70EL2 814 aa7.64□□□□□ -1.19
LINC01961-201ENST00000449954 RRAGAQ7L523 313 aa7.64□□□□□ -1.19
LINC01961-201ENST00000449954 SPPL2CQ8IUH8 684 aa7.64□□□□□ -1.19
LINC01961-201ENST00000449954 GRAMD1CQ8IYS0 662 aa7.64□□□□□ -1.19
LINC01961-201ENST00000449954 WDTC1Q8N5D0 677 aa7.64□□□□□ -1.19
LINC01961-201ENST00000449954 LINC00301Q8NCQ3 95 aa7.64□□□□□ -1.19
LINC01961-201ENST00000449954 CATSPER1Q8NEC5 780 aa7.64□□□□□ -1.19
LINC01961-201ENST00000449954 SNX21Q969T3 373 aa7.64□□□□□ -1.19
LINC01961-201ENST00000449954 SLC35C1Q96A29 364 aa7.64□□□□□ -1.19
LINC01961-201ENST00000449954 VPS50Q96JG6 964 aa7.64□□□□□ -1.19
LINC01961-201ENST00000449954 TMX3Q96JJ7 454 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms