RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 PDHA2P29803 388 aa15.37■□□□□ 0.05
TOP3B-211ENST00000449704 PDX1P52945 283 aa15.37■□□□□ 0.05
TOP3B-211ENST00000449704 CSE1LP55060 971 aaKnown RBP15.37■□□□□ 0.05
TOP3B-211ENST00000449704 EIF3BP55884 814 aaKnown RBP15.37■□□□□ 0.05
TOP3B-211ENST00000449704 CALCOCO2Q13137 446 aa15.37■□□□□ 0.05
TOP3B-211ENST00000449704 GPR18Q14330 331 aa15.37■□□□□ 0.05
TOP3B-211ENST00000449704 KRT33BQ14525 404 aa15.37■□□□□ 0.05
TOP3B-211ENST00000449704 HIF1AQ16665 826 aa15.37■□□□□ 0.05
TOP3B-211ENST00000449704 SYTL3Q4VX76 610 aa15.37■□□□□ 0.05
TOP3B-211ENST00000449704 PHF19Q5T6S3 580 aa15.37■□□□□ 0.05
TOP3B-211ENST00000449704 ZNF470Q6ECI4 717 aa15.37■□□□□ 0.05
TOP3B-211ENST00000449704 TMPRSS9Q7Z410 1059 aa15.37■□□□□ 0.05
TOP3B-211ENST00000449704 RBM12BQ8IXT5 1001 aaKnown RBP15.37■□□□□ 0.05
TOP3B-211ENST00000449704 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.37■□□□□ 0.05
TOP3B-211ENST00000449704 GPR150Q8NGU9 434 aa15.37■□□□□ 0.05
TOP3B-211ENST00000449704 KIF18AQ8NI77 898 aa15.37■□□□□ 0.05
TOP3B-211ENST00000449704 NCSTNQ92542 709 aa15.37■□□□□ 0.05
TOP3B-211ENST00000449704 GRAMD1AQ96CP6 724 aa15.37■□□□□ 0.05
TOP3B-211ENST00000449704 RMDN2Q96LZ7 410 aa15.37■□□□□ 0.05
TOP3B-211ENST00000449704 TMEM74Q96NL1 305 aa15.37■□□□□ 0.05
TOP3B-211ENST00000449704 TCF12Q99081 682 aa15.37■□□□□ 0.05
TOP3B-211ENST00000449704 TSSK1BQ9BXA7 367 aa15.37■□□□□ 0.05
TOP3B-211ENST00000449704 STRADBQ9C0K7 418 aa15.37■□□□□ 0.05
TOP3B-211ENST00000449704 SEMA6CQ9H3T2 930 aa15.37■□□□□ 0.05
TOP3B-211ENST00000449704 UCK1Q9HA47 277 aa15.37■□□□□ 0.05
TOP3B-211ENST00000449704 UTP11Q9Y3A2 253 aaKnown RBP15.37■□□□□ 0.05
TOP3B-211ENST00000449704 CACNA1BQ00975 2339 aa15.36■□□□□ 0.05
TOP3B-211ENST00000449704 LILRA5A6NI73 299 aa15.36■□□□□ 0.05
TOP3B-211ENST00000449704 IFRD1O00458 451 aaPredicted RBP15.36■□□□□ 0.05
TOP3B-211ENST00000449704 LIN7AO14910 233 aaPredicted RBP15.36■□□□□ 0.05
TOP3B-211ENST00000449704 HOXB3P14651 431 aaPredicted RBP15.36■□□□□ 0.05
TOP3B-211ENST00000449704 OGNP20774 298 aaKnown RBP15.36■□□□□ 0.05
TOP3B-211ENST00000449704 MPSTP25325 297 aa15.36■□□□□ 0.05
TOP3B-211ENST00000449704 FMO4P31512 558 aa15.36■□□□□ 0.05
TOP3B-211ENST00000449704 ELK3P41970 407 aa15.36■□□□□ 0.05
TOP3B-211ENST00000449704 EPHA4P54764 986 aa15.36■□□□□ 0.05
TOP3B-211ENST00000449704 CFHR1Q03591 330 aa15.36■□□□□ 0.05
TOP3B-211ENST00000449704 CYP4F3Q08477 520 aa15.36■□□□□ 0.05
TOP3B-211ENST00000449704 RPA4Q13156 261 aa15.36■□□□□ 0.05
TOP3B-211ENST00000449704 TUBB2AQ13885 445 aa15.36■□□□□ 0.05
TOP3B-211ENST00000449704 BOP1Q14137 746 aaKnown RBP15.36■□□□□ 0.05
TOP3B-211ENST00000449704 CRYMQ14894 314 aa15.36■□□□□ 0.05
TOP3B-211ENST00000449704 CLPPQ16740 277 aaPredicted RBP15.36■□□□□ 0.05
TOP3B-211ENST00000449704 ZNF658BQ4V348 819 aaPredicted RBP15.36■□□□□ 0.05
TOP3B-211ENST00000449704 RNF187Q5TA31 235 aaPredicted RBP15.36■□□□□ 0.05
TOP3B-211ENST00000449704 CAPRIN2Q6IMN6 1127 aaKnown RBP15.36■□□□□ 0.05
TOP3B-211ENST00000449704 DUS1LQ6P1R4 473 aaKnown RBP15.36■□□□□ 0.05
TOP3B-211ENST00000449704 FOXR1Q6PIV2 292 aa15.36■□□□□ 0.05
TOP3B-211ENST00000449704 LRRC6Q86X45 466 aa15.36■□□□□ 0.05
TOP3B-211ENST00000449704 CILP2Q8IUL8 1156 aa15.36■□□□□ 0.05
TOP3B-211ENST00000449704 IGDCC3Q8IVU1 814 aa15.36■□□□□ 0.05
TOP3B-211ENST00000449704 KRT222Q8N1A0 295 aa15.36■□□□□ 0.05
TOP3B-211ENST00000449704 JPH3Q8WXH2 748 aaPredicted RBP15.36■□□□□ 0.05
TOP3B-211ENST00000449704 NXPE2Q96DL1 559 aa15.36■□□□□ 0.05
TOP3B-211ENST00000449704 CFAP36Q96G28 342 aa15.36■□□□□ 0.05
TOP3B-211ENST00000449704 NAT9Q9BTE0 207 aa15.36■□□□□ 0.05
TOP3B-211ENST00000449704 TUBB2BQ9BVA1 445 aa15.36■□□□□ 0.05
TOP3B-211ENST00000449704 TMEM121BQ9BXQ6 578 aaPredicted RBP15.36■□□□□ 0.05
TOP3B-211ENST00000449704 NRSN2Q9GZP1 204 aa15.36■□□□□ 0.05
TOP3B-211ENST00000449704 GNPTGQ9UJJ9 305 aa15.36■□□□□ 0.05
TOP3B-211ENST00000449704 CHMP2BQ9UQN3 213 aa15.36■□□□□ 0.05
TOP3B-211ENST00000449704 CRYL1Q9Y2S2 319 aa15.36■□□□□ 0.05
TOP3B-211ENST00000449704 MRFAP1Q9Y605 127 aa15.36■□□□□ 0.05
TOP3B-211ENST00000449704 FAM169AQ9Y6X4 670 aa15.36■□□□□ 0.05
TOP3B-211ENST00000449704 BPTFQ12830 3046 aa15.36■□□□□ 0.05
TOP3B-211ENST00000449704 ZNF106Q9H2Y7 1883 aaKnown RBP15.35■□□□□ 0.05
TOP3B-211ENST00000449704 PLXNB3Q9ULL4 1909 aa15.35■□□□□ 0.05
TOP3B-211ENST00000449704 TP73O15350 636 aa15.35■□□□□ 0.05
TOP3B-211ENST00000449704 UBXN7O94888 489 aa15.35■□□□□ 0.05
TOP3B-211ENST00000449704 TTC4O95801 387 aa15.35■□□□□ 0.05
TOP3B-211ENST00000449704 MPOP05164 745 aa15.35■□□□□ 0.05
TOP3B-211ENST00000449704 PROS1P07225 676 aa15.35■□□□□ 0.05
TOP3B-211ENST00000449704 F7P08709 466 aaPredicted RBP15.35■□□□□ 0.05
TOP3B-211ENST00000449704 CSF2RBP32927 897 aa15.35■□□□□ 0.05
TOP3B-211ENST00000449704 ZFP36L1Q07352 338 aaKnown RBP15.35■□□□□ 0.05
TOP3B-211ENST00000449704 HSPA14Q0VDF9 509 aa15.35■□□□□ 0.05
TOP3B-211ENST00000449704 PDIA2Q13087 525 aaKnown RBP15.35■□□□□ 0.05
TOP3B-211ENST00000449704 CTBP1Q13363 440 aa15.35■□□□□ 0.05
TOP3B-211ENST00000449704 SQSTM1Q13501 440 aa15.35■□□□□ 0.05
TOP3B-211ENST00000449704 TYSND1Q2T9J0 566 aa15.35■□□□□ 0.05
TOP3B-211ENST00000449704 HSP90AA5PQ58FG0 334 aa15.35■□□□□ 0.05
TOP3B-211ENST00000449704 C3orf38Q5JPI3 329 aa15.35■□□□□ 0.05
TOP3B-211ENST00000449704 SNAP47Q5SQN1 464 aa15.35■□□□□ 0.05
TOP3B-211ENST00000449704 DUPD1Q68J44 220 aa15.35■□□□□ 0.05
TOP3B-211ENST00000449704 ZNF574Q6ZN55 896 aaPredicted RBP15.35■□□□□ 0.05
TOP3B-211ENST00000449704 ANKMY2Q8IV38 441 aa15.35■□□□□ 0.05
TOP3B-211ENST00000449704 SLITRK4Q8IW52 837 aa15.35■□□□□ 0.05
TOP3B-211ENST00000449704 UNC5BQ8IZJ1 945 aa15.35■□□□□ 0.05
TOP3B-211ENST00000449704 PHC3Q8NDX5 983 aa15.35■□□□□ 0.05
TOP3B-211ENST00000449704 MNS1Q8NEH6 495 aa15.35■□□□□ 0.05
TOP3B-211ENST00000449704 MDM1Q8TC05 714 aa15.35■□□□□ 0.05
TOP3B-211ENST00000449704 LKAAEAR1Q8TD35 194 aa15.35■□□□□ 0.05
TOP3B-211ENST00000449704 CALML6Q8TD86 181 aa15.35■□□□□ 0.05
TOP3B-211ENST00000449704 LPGAT1Q92604 370 aa15.35■□□□□ 0.05
TOP3B-211ENST00000449704 TMEM159Q96B96 161 aa15.35■□□□□ 0.05
TOP3B-211ENST00000449704 FERD3LQ96RJ6 166 aa15.35■□□□□ 0.05
TOP3B-211ENST00000449704 CARD6Q9BX69 1037 aa15.35■□□□□ 0.05
TOP3B-211ENST00000449704 RAB17Q9H0T7 212 aa15.35■□□□□ 0.05
TOP3B-211ENST00000449704 P2RY12Q9H244 342 aa15.35■□□□□ 0.05
TOP3B-211ENST00000449704 OR52A5Q9H2C5 316 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms