RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-238ENST00000449544 SNX30Q5VWJ9 437 aa8.32□□□□□ -1.08
HCG18-238ENST00000449544 NADSYN1Q6IA69 706 aa8.32□□□□□ -1.08
HCG18-238ENST00000449544 FAM45BPQ6NSW5 357 aa8.32□□□□□ -1.08
HCG18-238ENST00000449544 MILR1Q7Z6M3 343 aa8.32□□□□□ -1.08
HCG18-238ENST00000449544 TSPAN33Q86UF1 283 aa8.32□□□□□ -1.08
HCG18-238ENST00000449544 EID3Q8N140 333 aa8.32□□□□□ -1.08
HCG18-238ENST00000449544 FAM45AQ8TCE6 357 aa8.32□□□□□ -1.08
HCG18-238ENST00000449544 FGF11Q92914 225 aa8.32□□□□□ -1.08
HCG18-238ENST00000449544 MIPEPQ99797 713 aa8.32□□□□□ -1.08
HCG18-238ENST00000449544 MVB12BQ9H7P6 319 aa8.32□□□□□ -1.08
HCG18-238ENST00000449544 MRPL40Q9NQ50 206 aaKnown RBP8.32□□□□□ -1.08
HCG18-238ENST00000449544 RIC8BQ9NVN3 520 aa8.32□□□□□ -1.08
HCG18-238ENST00000449544 EBF1Q9UH73 591 aa8.32□□□□□ -1.08
HCG18-238ENST00000449544 ATXN7L1Q9ULK2 861 aaPredicted RBP8.32□□□□□ -1.08
HCG18-238ENST00000449544 VPS4AQ9UN37 437 aa8.32□□□□□ -1.08
HCG18-238ENST00000449544 RGSL1A5PLK6 1076 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 ENO2P09104 434 aaPredicted RBP8.31□□□□□ -1.08
HCG18-238ENST00000449544 PECAM1P16284 738 aaPredicted RBP8.31□□□□□ -1.08
HCG18-238ENST00000449544 MARCKSL1P49006 195 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 SPINT3P49223 89 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 SF3A3Q12874 501 aaKnown RBP eCLIP8.31□□□□□ -1.084e-17■■□□□ 12.4
HCG18-238ENST00000449544 LVRNQ6Q4G3 990 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 UNC5AQ6ZN44 842 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 AMIGO1Q86WK6 493 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 DCUN1D3Q8IWE4 304 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 C10orf53Q8N6V4 93 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 SPATA4Q8NEY3 305 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 STAG3L4Q8TBR4 150 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 PHF21BQ96EK2 531 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 SLC39A13Q96H72 371 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 APOLD1Q96LR9 279 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 CTRCQ99895 268 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 DUSP15Q9H1R2 295 aaPredicted RBP8.31□□□□□ -1.08
HCG18-238ENST00000449544 MAGEE1Q9HCI5 957 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 DNAJC11Q9NVH1 559 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.31□□□□□ -1.08
HCG18-238ENST00000449544 BCAP29Q9UHQ4 241 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 EFR3BQ9Y2G0 817 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 TOR1BO14657 336 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 ZNF185O15231 689 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 CAPN5O15484 640 aaPredicted RBP8.31□□□□□ -1.08
HCG18-238ENST00000449544 AP2A1O95782 977 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 ESR1P03372 595 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 NTRK1P04629 796 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 ZDHHC11BP0C7U3 371 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 F3P13726 295 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 SPINK2P20155 84 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 PCBP4P57723 403 aaKnown RBP8.31□□□□□ -1.08
HCG18-238ENST00000449544 VSX2P58304 361 aaPredicted RBP8.31□□□□□ -1.08
HCG18-238ENST00000449544 NCALDP61601 193 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 GRM7Q14831 915 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 SIRPB2Q5JXA9 342 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 C9orf64Q5T6V5 341 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 WFDC5Q8TCV5 224 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 INPP5DQ92835 1189 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 TCF12Q99081 682 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 NOL6Q9H6R4 1146 aaKnown RBP8.31□□□□□ -1.08
HCG18-238ENST00000449544 PRDM8Q9NQV8 689 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 AJAP1Q9UKB5 411 aaPredicted RBP8.31□□□□□ -1.08
HCG18-238ENST00000449544 CAPN8A6NHC0 703 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 VILLO15195 856 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 FAM189A1O60320 539 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 GOT2P00505 430 aaKnown RBP8.31□□□□□ -1.08
HCG18-238ENST00000449544 IL1R2P27930 398 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 ATG16L1Q676U5 607 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 NYAP1Q6ZVC0 841 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 NUDCD3Q8IVD9 361 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 WDTC1Q8N5D0 677 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 FAM71BQ8TC56 605 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 PGAP3Q96FM1 320 aaPredicted RBP8.31□□□□□ -1.08
HCG18-238ENST00000449544 CDKN2AIPNLQ96HQ2 116 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 FANCFQ9NPI8 374 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 AGPAT4Q9NRZ5 378 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 EPHA6Q9UF33 1036 aa8.31□□□□□ -1.08
HCG18-238ENST00000449544 TNPO3Q9Y5L0 923 aaKnown RBP8.31□□□□□ -1.08
HCG18-238ENST00000449544 ATAD5Q96QE3 1844 aa8.3□□□□□ -1.08
HCG18-238ENST00000449544 OR52A4PA6NMU1 304 aa8.3□□□□□ -1.08
HCG18-238ENST00000449544 DRGXA6NNA5 263 aa8.3□□□□□ -1.08
HCG18-238ENST00000449544 GSTA4O15217 222 aa8.3□□□□□ -1.08
HCG18-238ENST00000449544 SGTAO43765 313 aa8.3□□□□□ -1.08
HCG18-238ENST00000449544 GDF9O60383 454 aa8.3□□□□□ -1.08
HCG18-238ENST00000449544 BUD31P41223 144 aaPredicted RBP8.3□□□□□ -1.08
HCG18-238ENST00000449544 CDKN2BP42772 138 aa8.3□□□□□ -1.08
HCG18-238ENST00000449544 SERPINB8P50452 374 aa8.3□□□□□ -1.08
HCG18-238ENST00000449544 SGSHP51688 502 aa8.3□□□□□ -1.08
HCG18-238ENST00000449544 ARSFP54793 590 aa8.3□□□□□ -1.08
HCG18-238ENST00000449544 PPP2CBP62714 309 aa8.3□□□□□ -1.08
HCG18-238ENST00000449544 PPP2CAP67775 309 aa8.3□□□□□ -1.08
HCG18-238ENST00000449544 HYAL2Q12891 473 aa8.3□□□□□ -1.08
HCG18-238ENST00000449544 TARDBPQ13148 414 aaKnown RBP eCLIP8.3□□□□□ -1.083e-6■■□□□ 11.6
HCG18-238ENST00000449544 WSCD2Q2TBF2 565 aa8.3□□□□□ -1.08
HCG18-238ENST00000449544 TSTD2Q5T7W7 516 aa8.3□□□□□ -1.08
HCG18-238ENST00000449544 NCBP2-AS2Q69YL0 99 aa8.3□□□□□ -1.08
HCG18-238ENST00000449544 ARCQ7LC44 396 aa8.3□□□□□ -1.08
HCG18-238ENST00000449544 HOMEZQ8IX15 550 aa8.3□□□□□ -1.08
HCG18-238ENST00000449544 ABCA7Q8IZY2 2146 aa8.3□□□□□ -1.08
HCG18-238ENST00000449544 METTL6Q8TCB7 284 aa8.3□□□□□ -1.08
HCG18-238ENST00000449544 CRB3Q9BUF7 120 aa8.3□□□□□ -1.08
HCG18-238ENST00000449544 DEFB126Q9BYW3 111 aa8.3□□□□□ -1.08
HCG18-238ENST00000449544 PNO1Q9NRX1 252 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms