RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 MN1Q10571 1320 aaPredicted RBP11.67□□□□□ -0.54
LSP1P3-201ENST00000449530 KLHL33A6NCF5 533 aa11.67□□□□□ -0.54
LSP1P3-201ENST00000449530 AP3B1O00203 1094 aa11.67□□□□□ -0.54
LSP1P3-201ENST00000449530 PRAMEF10O60809 474 aa11.67□□□□□ -0.54
LSP1P3-201ENST00000449530 TMEM63AO94886 807 aa11.67□□□□□ -0.54
LSP1P3-201ENST00000449530 UBXN7O94888 489 aa11.67□□□□□ -0.54
LSP1P3-201ENST00000449530 CCL4P13236 92 aa11.67□□□□□ -0.54
LSP1P3-201ENST00000449530 AMD1P17707 334 aa11.67□□□□□ -0.54
LSP1P3-201ENST00000449530 SLC5A2P31639 672 aa11.67□□□□□ -0.54
LSP1P3-201ENST00000449530 CSTF2P33240 577 aaKnown RBP eCLIP11.67□□□□□ -0.54
LSP1P3-201ENST00000449530 NSG1P42857 185 aa11.67□□□□□ -0.54
LSP1P3-201ENST00000449530 CAPZBP47756 277 aa11.67□□□□□ -0.54
LSP1P3-201ENST00000449530 PREPP48147 710 aa11.67□□□□□ -0.54
LSP1P3-201ENST00000449530 FNTAP49354 379 aa11.67□□□□□ -0.54
LSP1P3-201ENST00000449530 CDK16Q00536 496 aa11.67□□□□□ -0.54
LSP1P3-201ENST00000449530 TRA2AQ13595 282 aaKnown RBP eCLIP11.67□□□□□ -0.54
LSP1P3-201ENST00000449530 SEMA3AQ14563 771 aa11.67□□□□□ -0.54
LSP1P3-201ENST00000449530 FASTKD1Q53R41 847 aaKnown RBP11.67□□□□□ -0.54
LSP1P3-201ENST00000449530 PACS1Q6VY07 963 aa11.67□□□□□ -0.54
LSP1P3-201ENST00000449530 FAM129CQ86XR2 697 aa11.67□□□□□ -0.54
LSP1P3-201ENST00000449530 SPACA3Q8IXA5 215 aa11.67□□□□□ -0.54
LSP1P3-201ENST00000449530 RBM12BQ8IXT5 1001 aaKnown RBP11.67□□□□□ -0.54
LSP1P3-201ENST00000449530 OTUD6BQ8N6M0 293 aa11.67□□□□□ -0.54
LSP1P3-201ENST00000449530 AGBL5Q8NDL9 886 aa11.67□□□□□ -0.54
LSP1P3-201ENST00000449530 OR4L1Q8NH43 312 aa11.67□□□□□ -0.54
LSP1P3-201ENST00000449530 GRK7Q8WTQ7 553 aa11.67□□□□□ -0.54
LSP1P3-201ENST00000449530 CPT1BQ92523 772 aa11.67□□□□□ -0.54
LSP1P3-201ENST00000449530 PEX13Q92968 403 aa11.67□□□□□ -0.54
LSP1P3-201ENST00000449530 CRELD1Q96HD1 420 aa11.67□□□□□ -0.54
LSP1P3-201ENST00000449530 INSM2Q96T92 566 aaPredicted RBP11.67□□□□□ -0.54
LSP1P3-201ENST00000449530 NAPGQ99747 312 aaPredicted RBP11.67□□□□□ -0.54
LSP1P3-201ENST00000449530 CCM2Q9BSQ5 444 aa11.67□□□□□ -0.54
LSP1P3-201ENST00000449530 DDX47Q9H0S4 455 aaKnown RBP11.67□□□□□ -0.54
LSP1P3-201ENST00000449530 CATSPERZQ9NTU4 200 aa11.67□□□□□ -0.54
LSP1P3-201ENST00000449530 MARCH4Q9P2E8 410 aaPredicted RBP11.67□□□□□ -0.54
LSP1P3-201ENST00000449530 ACSL5Q9ULC5 683 aa11.67□□□□□ -0.54
LSP1P3-201ENST00000449530 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.67□□□□□ -0.54
LSP1P3-201ENST00000449530 GOLGA8MH3BSY2 632 aa11.66□□□□□ -0.54
LSP1P3-201ENST00000449530 OR1I1O60431 355 aa11.66□□□□□ -0.54
LSP1P3-201ENST00000449530 AVILO75366 819 aa11.66□□□□□ -0.54
LSP1P3-201ENST00000449530 AP2A2O94973 939 aa11.66□□□□□ -0.54
LSP1P3-201ENST00000449530 NMBRP28336 390 aa11.66□□□□□ -0.54
LSP1P3-201ENST00000449530 MAGEA6P43360 314 aa11.66□□□□□ -0.54
LSP1P3-201ENST00000449530 NPY2RP49146 381 aa11.66□□□□□ -0.54
LSP1P3-201ENST00000449530 SARNPP82979 210 aaKnown RBP11.66□□□□□ -0.54
LSP1P3-201ENST00000449530 C19orf57Q0VDD7 668 aa11.66□□□□□ -0.54
LSP1P3-201ENST00000449530 BOP1Q14137 746 aaKnown RBP11.66□□□□□ -0.54
LSP1P3-201ENST00000449530 PPP1R7Q15435 360 aa11.66□□□□□ -0.54
LSP1P3-201ENST00000449530 LRRC8BQ6P9F7 803 aa11.66□□□□□ -0.54
LSP1P3-201ENST00000449530 LDB1Q86U70 411 aaPredicted RBP11.66□□□□□ -0.54
LSP1P3-201ENST00000449530 PLXDC1Q8IUK5 500 aa11.66□□□□□ -0.54
LSP1P3-201ENST00000449530 USP7Q93009 1102 aa11.66□□□□□ -0.54
LSP1P3-201ENST00000449530 PMEPA1Q969W9 287 aa11.66□□□□□ -0.54
LSP1P3-201ENST00000449530 TGM7Q96PF1 710 aa11.66□□□□□ -0.54
LSP1P3-201ENST00000449530 TREX1Q9NSU2 369 aa11.66□□□□□ -0.54
LSP1P3-201ENST00000449530 WDR70Q9NW82 654 aa11.66□□□□□ -0.54
LSP1P3-201ENST00000449530 FOXJ2Q9P0K8 574 aa11.66□□□□□ -0.54
LSP1P3-201ENST00000449530 NEU2Q9Y3R4 380 aa11.66□□□□□ -0.54
LSP1P3-201ENST00000449530 PCDHGA7Q9Y5G6 932 aa11.66□□□□□ -0.54
LSP1P3-201ENST00000449530 SDK2Q58EX2 2172 aa11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 C17orf113A0A1B0GUU1 675 aa11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 CTAGE9A4FU28 777 aa11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 EFCAB7A8K855 629 aa11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 C9orf172C9J069 976 aa11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 QSOX1O00391 747 aa11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 CAPN5O15484 640 aaPredicted RBP11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 KLK10O43240 276 aa11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 FTH1P02794 183 aa11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 FGF3P11487 239 aaPredicted RBP11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 ITGB6P18564 788 aa11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 LEPRP48357 1165 aaKnown RBP11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 PPP1CAP62136 330 aa11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 TLE3Q04726 772 aa11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 KRT33BQ14525 404 aa11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 ZNF658BQ4V348 819 aaPredicted RBP11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 SYTL3Q4VX76 610 aa11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 AARS2Q5JTZ9 985 aaKnown RBP11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 LYPLAL1Q5VWZ2 237 aa11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 IRGCQ6NXR0 463 aa11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 CASC4Q6P4E1 433 aa11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 CES3Q6UWW8 571 aa11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 NAPRTQ6XQN6 538 aa11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 CERS6Q6ZMG9 384 aa11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 CAND1Q86VP6 1230 aaKnown RBP11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 C17orf53Q8N3J3 647 aaPredicted RBP11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 MPP5Q8N3R9 675 aa11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 ELMO1Q92556 727 aa11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 ART4Q93070 314 aa11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 MFSD3Q96ES6 412 aa11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 TTC1Q99614 292 aa11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 KIFC1Q9BW19 673 aa11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 OR52A5Q9H2C5 316 aa11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 MRM3Q9HC36 420 aaKnown RBP11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 OCIAD1Q9NX40 245 aa11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 PDP2Q9P2J9 529 aa11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 ASIC3Q9UHC3 531 aa11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 ANAPC5Q9UJX4 755 aa11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 SOX13Q9UN79 622 aa11.65□□□□□ -0.54
LSP1P3-201ENST00000449530 IFRD1O00458 451 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms