RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 DGKAP23743 735 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 CRHR1P34998 444 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 HK3P52790 923 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 PPARDQ03181 441 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 HSPA14Q0VDF9 509 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 INSCQ1MX18 579 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 SYTL3Q4VX76 610 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 PRR23BQ6ZRT6 265 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 FAM83HQ6ZRV2 1179 aaPredicted RBP13.79□□□□□ -0.2
SHMT2-203ENST00000449049 LILRA3Q8N6C8 439 aaPredicted RBP13.79□□□□□ -0.2
SHMT2-203ENST00000449049 EEF1AKMT1Q8WVE0 214 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 KCTD4Q8WVF5 259 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 LINGO1Q96FE5 620 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 GPR78Q96P69 363 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 DERL2Q9GZP9 239 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 TRNAU1APQ9NX07 287 aaKnown RBP13.79□□□□□ -0.2
SHMT2-203ENST00000449049 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.79□□□□□ -0.2
SHMT2-203ENST00000449049 DCDC2Q9UHG0 476 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 KLF15Q9UIH9 416 aa13.79□□□□□ -0.2
SHMT2-203ENST00000449049 COPEO14579 308 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 PRPF4O43172 522 aaKnown RBP eCLIP13.78□□□□□ -0.21e-8■■■□□ 17.5
SHMT2-203ENST00000449049 TNFP01375 233 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 CCT5P48643 541 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 RGS4P49798 205 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 BLKP51451 505 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 CLCNKAP51800 687 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 C21orf59P57076 290 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 PLOD1Q02809 727 aaPredicted RBP13.78□□□□□ -0.2
SHMT2-203ENST00000449049 LRP8Q14114 963 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 CSHL1Q14406 222 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 NFE2L1Q14494 772 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 LRRC8EQ6NSJ5 796 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 ZC3H14Q6PJT7 736 aaKnown RBP13.78□□□□□ -0.2
SHMT2-203ENST00000449049 CDHR3Q6ZTQ4 885 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 NEK10Q6ZWH5 1172 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 RD3Q7Z3Z2 195 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 HID1Q8IV36 788 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 VRK3Q8IV63 474 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 CFAP206Q8IYR0 622 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 TMEM159Q96B96 161 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 SLC13A1Q9BZW2 595 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 SMG5Q9UPR3 1016 aaKnown RBP13.78□□□□□ -0.2
SHMT2-203ENST00000449049 ST14Q9Y5Y6 855 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 TP53BP1Q12888 1972 aaPredicted RBP13.78□□□□□ -0.2
SHMT2-203ENST00000449049 ZDBF2Q9HCK1 2354 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 TTC28Q96AY4 2481 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 SPAG7O75391 227 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 CSF2P04141 144 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 CD1DP15813 335 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 VCLP18206 1134 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 RPA4Q13156 261 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 FAM83EQ2M2I3 478 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 TSNAXIP1Q2TAA8 658 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 METRNLQ641Q3 311 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 PHACTR4Q8IZ21 702 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 SLC22A15Q8IZD6 547 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 SPATA6LQ8N4H0 392 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 PIGKQ92643 395 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 NXNL1Q96CM4 212 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 LOXL4Q96JB6 756 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 PRRX2Q99811 253 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 DPEP2Q9H4A9 486 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 KLC4Q9NSK0 619 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 FAM8A1Q9UBU6 413 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 PLEKHM1Q9Y4G2 1056 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 R4GN57 208 aa13.78□□□□□ -0.2
SHMT2-203ENST00000449049 A0A1B0GVT2 93 aa13.77□□□□□ -0.21
SHMT2-203ENST00000449049 MPC1LP0DKB6 136 aa13.77□□□□□ -0.21
SHMT2-203ENST00000449049 NME1P15531 152 aaKnown RBP13.77□□□□□ -0.21
SHMT2-203ENST00000449049 PREPP48147 710 aa13.77□□□□□ -0.21
SHMT2-203ENST00000449049 ATP6V0D1P61421 351 aa13.77□□□□□ -0.21
SHMT2-203ENST00000449049 AGAP9Q5VTM2 703 aa13.77□□□□□ -0.21
SHMT2-203ENST00000449049 CYHR1Q6ZMK1 362 aa13.77□□□□□ -0.21
SHMT2-203ENST00000449049 RABEPKQ7Z6M1 372 aa13.77□□□□□ -0.21
SHMT2-203ENST00000449049 TSNARE1Q96NA8 513 aa13.77□□□□□ -0.21
SHMT2-203ENST00000449049 TMEM168Q9H0V1 697 aa13.77□□□□□ -0.21
SHMT2-203ENST00000449049 TCEAL2Q9H3H9 227 aaPredicted RBP13.77□□□□□ -0.21
SHMT2-203ENST00000449049 ERVMER34-1Q9H9K5 563 aa13.77□□□□□ -0.21
SHMT2-203ENST00000449049 NMRAL1Q9HBL8 299 aa13.77□□□□□ -0.21
SHMT2-203ENST00000449049 ZNF358Q9NW07 568 aa13.77□□□□□ -0.21
SHMT2-203ENST00000449049 DNAJC28Q9NX36 388 aa13.77□□□□□ -0.21
SHMT2-203ENST00000449049 RUVBL2Q9Y230 463 aaKnown RBP13.77□□□□□ -0.21
SHMT2-203ENST00000449049 KCNK6Q9Y257 313 aa13.77□□□□□ -0.21
SHMT2-203ENST00000449049 DNAJC16Q9Y2G8 782 aa13.77□□□□□ -0.21
SHMT2-203ENST00000449049 SCAMP1O15126 338 aa13.76□□□□□ -0.21
SHMT2-203ENST00000449049 CTSKP43235 329 aa13.76□□□□□ -0.21
SHMT2-203ENST00000449049 SLC18A1P54219 525 aa13.76□□□□□ -0.21
SHMT2-203ENST00000449049 HNRNPH2P55795 449 aaKnown RBP13.76□□□□□ -0.21
SHMT2-203ENST00000449049 CTBSQ01459 385 aa13.76□□□□□ -0.21
SHMT2-203ENST00000449049 BNC1Q01954 994 aa13.76□□□□□ -0.21
SHMT2-203ENST00000449049 ACAP2Q15057 778 aa13.76□□□□□ -0.21
SHMT2-203ENST00000449049 ZNF542PQ5EBM4 170 aa13.76□□□□□ -0.21
SHMT2-203ENST00000449049 PIWIL4Q7Z3Z4 852 aaKnown RBP13.76□□□□□ -0.21
SHMT2-203ENST00000449049 MYO1HQ8N1T3 1032 aa13.76□□□□□ -0.21
SHMT2-203ENST00000449049 CEP76Q8TAP6 659 aa13.76□□□□□ -0.21
SHMT2-203ENST00000449049 GPBAR1Q8TDU6 330 aa13.76□□□□□ -0.21
SHMT2-203ENST00000449049 OR52A5Q9H2C5 316 aa13.76□□□□□ -0.21
SHMT2-203ENST00000449049 TMEM216Q9P0N5 145 aa13.76□□□□□ -0.21
SHMT2-203ENST00000449049 IKZF3Q9UKT9 509 aa13.76□□□□□ -0.21
SHMT2-203ENST00000449049 ACSL5Q9ULC5 683 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms