RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 ELK3P41970 407 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 GPR3P46089 330 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 ARCN1P48444 511 aaKnown RBP11.66□□□□□ -0.54
RFC4-208ENST00000447345 INHBCP55103 352 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 CALCOCO2Q13137 446 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 CAMK2BQ13554 666 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 CRYMQ14894 314 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 PLCL1Q15111 1095 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 LONRF1Q17RB8 773 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 PTRHD1Q6GMV3 140 aaKnown RBP11.66□□□□□ -0.54
RFC4-208ENST00000447345 NEPROQ6NW34 567 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 C8orf74Q6P047 294 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 WASH2PQ6VEQ5 465 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 SDCCAG8Q86SQ7 713 aaPredicted RBP11.66□□□□□ -0.54
RFC4-208ENST00000447345 TMEM135Q86UB9 458 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 ANKMY2Q8IV38 441 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 IGDCC3Q8IVU1 814 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 DENND6AQ8IWF6 608 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 AVL9Q8NBF6 648 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.66□□□□□ -0.54
RFC4-208ENST00000447345 OR10G6Q8NH81 332 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 MDM1Q8TC05 714 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 SH3KBP1Q96B97 665 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 FAM136AQ96C01 138 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 NXPE2Q96DL1 559 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 SGSM3Q96HU1 749 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 INSM2Q96T92 566 aaPredicted RBP11.66□□□□□ -0.54
RFC4-208ENST00000447345 EBNA1BP2Q99848 306 aaKnown RBP11.66□□□□□ -0.54
RFC4-208ENST00000447345 WDR83Q9BRX9 315 aaKnown RBP11.66□□□□□ -0.54
RFC4-208ENST00000447345 ERP44Q9BS26 406 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 TMEM121BQ9BXQ6 578 aaPredicted RBP11.66□□□□□ -0.54
RFC4-208ENST00000447345 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.66□□□□□ -0.54
RFC4-208ENST00000447345 SEMA6CQ9H3T2 930 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 WASH6PQ9NQA3 447 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 FBXO6Q9NRD1 293 aaPredicted RBP11.66□□□□□ -0.54
RFC4-208ENST00000447345 KLHL3Q9UH77 587 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 GNPTGQ9UJJ9 305 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 TSR3Q9UJK0 312 aaKnown RBP11.66□□□□□ -0.54
RFC4-208ENST00000447345 ACSL5Q9ULC5 683 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 SATB2Q9UPW6 733 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 CRYL1Q9Y2S2 319 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 MRFAP1Q9Y605 127 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 AK5Q9Y6K8 562 aa11.66□□□□□ -0.54
RFC4-208ENST00000447345 WDFY3Q8IZQ1 3526 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 ANKRD12Q6UB98 2062 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 C17orf113A0A1B0GUU1 675 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 KLHL33A6NCF5 533 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 LILRA5A6NI73 299 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 PRMT5O14744 637 aaPredicted RBP11.65□□□□□ -0.54
RFC4-208ENST00000447345 TP73O15350 636 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 HOXB3P14651 431 aaPredicted RBP11.65□□□□□ -0.54
RFC4-208ENST00000447345 OGNP20774 298 aaKnown RBP11.65□□□□□ -0.54
RFC4-208ENST00000447345 FMO4P31512 558 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 SLC1A2P43004 574 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 ARL4CP56559 192 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 GABREP78334 506 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 GPLD1P80108 840 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 MPP1Q00013 466 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 SLC7A5Q01650 507 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 PDIA2Q13087 525 aaKnown RBP11.65□□□□□ -0.54
RFC4-208ENST00000447345 CTBP1Q13363 440 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 KRT33BQ14525 404 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 FASTKD3Q14CZ7 662 aaKnown RBP11.65□□□□□ -0.54
RFC4-208ENST00000447345 TYSND1Q2T9J0 566 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 ZNF658BQ4V348 819 aaPredicted RBP11.65□□□□□ -0.54
RFC4-208ENST00000447345 ZNF789Q5FWF6 425 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 CTSL3PQ5NE16 218 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 SNAP47Q5SQN1 464 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 RNF187Q5TA31 235 aaPredicted RBP11.65□□□□□ -0.54
RFC4-208ENST00000447345 ARMC3Q5W041 872 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 ZNF449Q6P9G9 518 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 TMEM26Q6ZUK4 368 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 PIM3Q86V86 326 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 KCNMB4Q86W47 210 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 CILP2Q8IUL8 1156 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 BBOF1Q8ND07 529 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 RCBTB1Q8NDN9 531 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 KIF18AQ8NI77 898 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 NCSTNQ92542 709 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 LPGAT1Q92604 370 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 RSC1A1Q92681 617 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 CCDC74BQ96LY2 380 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 TSSK1BQ9BXA7 367 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 RAB17Q9H0T7 212 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 P2RY12Q9H244 342 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 OR52A5Q9H2C5 316 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 SLC40A1Q9NP59 571 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 IARS2Q9NSE4 1012 aaKnown RBP11.65□□□□□ -0.54
RFC4-208ENST00000447345 GRHL1Q9NZI5 618 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 SLC17A6Q9P2U8 582 aa11.65□□□□□ -0.54
RFC4-208ENST00000447345 ZC3H7BQ9UGR2 993 aaKnown RBP11.65□□□□□ -0.54
RFC4-208ENST00000447345 UTP11Q9Y3A2 253 aaKnown RBP11.65□□□□□ -0.54
RFC4-208ENST00000447345 ASPMQ8IZT6 3477 aa11.64□□□□□ -0.55
RFC4-208ENST00000447345 ESYT3A0FGR9 886 aa11.64□□□□□ -0.55
RFC4-208ENST00000447345 A8MU76 341 aa11.64□□□□□ -0.55
RFC4-208ENST00000447345 F8W8V4 182 aa11.64□□□□□ -0.55
RFC4-208ENST00000447345 SMAPO00193 183 aa11.64□□□□□ -0.55
RFC4-208ENST00000447345 IFRD1O00458 451 aaPredicted RBP11.64□□□□□ -0.55
RFC4-208ENST00000447345 LIN7AO14910 233 aaPredicted RBP11.64□□□□□ -0.55
RFC4-208ENST00000447345 PFDN6O15212 129 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms