RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 KCNJ14Q9UNX9 436 aa4.88□□□□□ -1.63
SDCBP-205ENST00000447267 L3MBTL1Q9Y468 752 aa4.88□□□□□ -1.63
SDCBP-205ENST00000447267 OR1A2Q9Y585 309 aa4.88□□□□□ -1.63
SDCBP-205ENST00000447267 NCOA6Q14686 2063 aaPredicted RBP4.88□□□□□ -1.63
SDCBP-205ENST00000447267 A8MXQ7 604 aa4.87□□□□□ -1.63
SDCBP-205ENST00000447267 HHLA1C9JL84 531 aa4.87□□□□□ -1.63
SDCBP-205ENST00000447267 HNRNPDLO14979 420 aaKnown RBP4.87□□□□□ -1.63
SDCBP-205ENST00000447267 PRAMEF2O60811 474 aa4.87□□□□□ -1.63
SDCBP-205ENST00000447267 IPO13O94829 963 aaKnown RBP4.87□□□□□ -1.63
SDCBP-205ENST00000447267 MOCS3O95396 460 aa4.87□□□□□ -1.63
SDCBP-205ENST00000447267 MT-ND3P03897 115 aa4.87□□□□□ -1.63
SDCBP-205ENST00000447267 OR52Z1P0C646 297 aa4.87□□□□□ -1.63
SDCBP-205ENST00000447267 CCDC130P13994 396 aa4.87□□□□□ -1.63
SDCBP-205ENST00000447267 APEX1P27695 318 aaKnown RBP4.87□□□□□ -1.63
SDCBP-205ENST00000447267 OTX2P32243 289 aa4.87□□□□□ -1.63
SDCBP-205ENST00000447267 MAPK9P45984 424 aa4.87□□□□□ -1.63
SDCBP-205ENST00000447267 ARCN1P48444 511 aaKnown RBP4.87□□□□□ -1.63
SDCBP-205ENST00000447267 POLD2P49005 469 aa4.87□□□□□ -1.63
SDCBP-205ENST00000447267 CXCR3P49682 368 aa4.87□□□□□ -1.63
SDCBP-205ENST00000447267 EXOSC10Q01780 885 aaKnown RBP4.87□□□□□ -1.63
SDCBP-205ENST00000447267 RIN1Q13671 783 aa4.87□□□□□ -1.63
SDCBP-205ENST00000447267 TRIM29Q14134 588 aa4.87□□□□□ -1.63
SDCBP-205ENST00000447267 GRM7Q14831 915 aa4.87□□□□□ -1.63
SDCBP-205ENST00000447267 CALCRLQ16602 461 aa4.87□□□□□ -1.63
SDCBP-205ENST00000447267 B3GNTL1Q67FW5 361 aaPredicted RBP4.87□□□□□ -1.63
SDCBP-205ENST00000447267 PWWP2BQ6NUJ5 590 aa4.87□□□□□ -1.63
SDCBP-205ENST00000447267 USP51Q70EK9 711 aa4.87□□□□□ -1.63
SDCBP-205ENST00000447267 NRROSQ86YC3 692 aa4.87□□□□□ -1.63
SDCBP-205ENST00000447267 CBARPQ8N350 705 aaPredicted RBP4.87□□□□□ -1.63
SDCBP-205ENST00000447267 KIAA0895Q8NCT3 520 aa4.87□□□□□ -1.63
SDCBP-205ENST00000447267 LILRB4Q8NHJ6 448 aa4.87□□□□□ -1.63
SDCBP-205ENST00000447267 AGAP11Q8TF27 550 aa4.87□□□□□ -1.63
SDCBP-205ENST00000447267 THAP3Q8WTV1 239 aaPredicted RBP4.87□□□□□ -1.63
SDCBP-205ENST00000447267 LARP4BQ92615 738 aaKnown RBP4.87□□□□□ -1.63
SDCBP-205ENST00000447267 AIFM3Q96NN9 605 aa4.87□□□□□ -1.63
SDCBP-205ENST00000447267 GPHA2Q96T91 129 aa4.87□□□□□ -1.63
SDCBP-205ENST00000447267 RNF26Q9BY78 433 aaPredicted RBP4.87□□□□□ -1.63
SDCBP-205ENST00000447267 PLEKHF2Q9H8W4 249 aa4.87□□□□□ -1.63
SDCBP-205ENST00000447267 COQ3Q9NZJ6 369 aa4.87□□□□□ -1.63
SDCBP-205ENST00000447267 MOSPD1Q9UJG1 213 aa4.87□□□□□ -1.63
SDCBP-205ENST00000447267 RYR1P21817 5038 aa4.87□□□□□ -1.63
SDCBP-205ENST00000447267 DYSFO75923 2080 aa4.87□□□□□ -1.63
SDCBP-205ENST00000447267 GTF3C1Q12789 2109 aa4.87□□□□□ -1.63
SDCBP-205ENST00000447267 TRIM49BA6NDI0 452 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 TMEM202A6NGA9 273 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 A6NNC1 897 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 NEMP1O14524 444 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 KIF1CO43896 1103 aaKnown RBP4.86□□□□□ -1.63
SDCBP-205ENST00000447267 KLK8O60259 260 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 SMPD2O60906 423 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 ALOX12BO75342 701 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 TACC1O75410 805 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 DNAJC8O75937 253 aaPredicted RBP4.86□□□□□ -1.63
SDCBP-205ENST00000447267 PRLP01236 227 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 ADRB3P13945 408 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 PVRP15151 417 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 CREB1P16220 341 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 PDGFRAP16234 1089 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 CD58P19256 250 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 AK4P27144 223 aaPredicted RBP4.86□□□□□ -1.63
SDCBP-205ENST00000447267 CCDC15Q0P6D6 951 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 CDH18Q13634 790 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 ZNF460Q14592 562 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 IRF4Q15306 451 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 FILIP1LQ4L180 1135 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 FAM133BQ5BKY9 247 aaKnown RBP4.86□□□□□ -1.63
SDCBP-205ENST00000447267 CREB3L3Q68CJ9 461 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 ADALQ6DHV7 355 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 Q6ZPA2 131 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 ZNF627Q7L945 461 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 TADA2BQ86TJ2 420 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 CCDC71Q8IV32 467 aaPredicted RBP4.86□□□□□ -1.63
SDCBP-205ENST00000447267 C3orf56Q8N813 242 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 CLEC1AQ8NC01 280 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 DENND6BQ8NEG7 585 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 TMIEQ8NEW7 156 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 KIAA1524Q8TCG1 905 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 PERPQ96FX8 193 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 SMARCD1Q96GM5 515 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 MAGED4Q96JG8 741 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 PRICKLE1Q96MT3 831 aaPredicted RBP4.86□□□□□ -1.63
SDCBP-205ENST00000447267 PLEKHG4BQ96PX9 1271 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 DMRTA2Q96SC8 542 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 FOXB1Q99853 325 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 APOOQ9BUR5 198 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 MTMR12Q9C0I1 747 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 TKTL2Q9H0I9 626 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 TAAR2Q9P1P5 351 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 SLC25A13Q9UJS0 675 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 STOML2Q9UJZ1 356 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 ZNF835Q9Y2P0 537 aa4.86□□□□□ -1.63
SDCBP-205ENST00000447267 INTS1Q8N201 2190 aaKnown RBP4.85□□□□□ -1.63
SDCBP-205ENST00000447267 KRTAP23-1A1A580 65 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 MBD3L4A6NDZ8 208 aaPredicted RBP4.85□□□□□ -1.63
SDCBP-205ENST00000447267 GOLGA6L3A6NEY3 463 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 MBD3L5A6NJ08 208 aaPredicted RBP4.85□□□□□ -1.63
SDCBP-205ENST00000447267 RASA4BC9J798 803 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 E9PMD0 336 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 K7ERQ8 282 aa4.85□□□□□ -1.63
SDCBP-205ENST00000447267 O00370 1275 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms