RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 ZNF77Q15935 545 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 ANO4Q32M45 955 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 CYBRD1Q53TN4 286 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 FAM45BPQ6NSW5 357 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 BPIFB6Q8NFQ5 453 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 FAM45AQ8TCE6 357 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 WBP2Q969T9 261 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 ISL2Q96A47 359 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 DEPDC7Q96QD5 511 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 ILKAPQ9H0C8 392 aaPredicted RBP12.91□□□□□ -0.34
DDX56-206ENST00000446987 SPAG4Q9NPE6 437 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.91□□□□□ -0.34
DDX56-206ENST00000446987 ADA2Q9NZK5 511 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 DUSP12Q9UNI6 340 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 MDM4O15151 490 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 TBX18O95935 607 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 LCP1P13796 627 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 IL10P22301 178 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 FASP25445 335 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 SLC7A9P82251 487 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 INPP5AQ14642 412 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 PCSK7Q16549 785 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 ATP13A4Q4VNC1 1196 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 BRMS1LQ5PSV4 323 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 ZFYVE27Q5T4F4 411 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 MROH9Q5TGP6 573 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 SEL1L3Q68CR1 1132 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 GLRX5Q86SX6 157 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 DHFR2Q86XF0 187 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 UNC45BQ8IWX7 931 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 RAVER1Q8IY67 606 aaKnown RBP12.91□□□□□ -0.34
DDX56-206ENST00000446987 ZNF781Q8N8C0 355 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 MAPK15Q8TD08 544 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 HDAC2Q92769 488 aaKnown RBP12.91□□□□□ -0.34
DDX56-206ENST00000446987 NXPE3Q969Y0 559 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 CEP19Q96LK0 163 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 CHID1Q9BWS9 393 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 MUC3BQ9H195 1237 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 LRRC40Q9H9A6 602 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 LRRC4Q9HBW1 653 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 ZFP14Q9HCL3 533 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 TLR8Q9NR97 1041 aaKnown RBP12.91□□□□□ -0.34
DDX56-206ENST00000446987 MOCS1Q9NZB8 636 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 ZNF639Q9UID6 485 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 NUDT5Q9UKK9 219 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 NAALAD2Q9Y3Q0 740 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 A3GALT2U3KPV4 340 aa12.91□□□□□ -0.34
DDX56-206ENST00000446987 TRAV19A0A0A6YYK7 116 aa12.9□□□□□ -0.34
DDX56-206ENST00000446987 TCRBV5S1A1TA0A578 114 aa12.9□□□□□ -0.34
DDX56-206ENST00000446987 SYNCRIPO60506 623 aaKnown RBP12.9□□□□□ -0.34
DDX56-206ENST00000446987 GREM1O60565 184 aa12.9□□□□□ -0.34
DDX56-206ENST00000446987 TLR5O60602 858 aa12.9□□□□□ -0.34
DDX56-206ENST00000446987 ALDH1A2O94788 518 aa12.9□□□□□ -0.34
DDX56-206ENST00000446987 CALB1P05937 261 aa12.9□□□□□ -0.34
DDX56-206ENST00000446987 GSTM1P09488 218 aa12.9□□□□□ -0.34
DDX56-206ENST00000446987 PCNAP12004 261 aa12.9□□□□□ -0.34
DDX56-206ENST00000446987 TCF3P15923 654 aa12.9□□□□□ -0.34
DDX56-206ENST00000446987 PFKLP17858 780 aa12.9□□□□□ -0.34
DDX56-206ENST00000446987 IL4RP24394 825 aa12.9□□□□□ -0.34
DDX56-206ENST00000446987 MSX2P35548 267 aaPredicted RBP12.9□□□□□ -0.34
DDX56-206ENST00000446987 OR3A3P47888 321 aa12.9□□□□□ -0.34
DDX56-206ENST00000446987 SRP54P61011 504 aaKnown RBP12.9□□□□□ -0.34
DDX56-206ENST00000446987 BNIP2Q12982 314 aa12.9□□□□□ -0.34
DDX56-206ENST00000446987 TDGQ13569 410 aa12.9□□□□□ -0.34
DDX56-206ENST00000446987 PDK2Q15119 407 aa12.9□□□□□ -0.34
DDX56-206ENST00000446987 YIF1BQ5BJH7 314 aa12.9□□□□□ -0.34
DDX56-206ENST00000446987 LDLRAP1Q5SW96 308 aa12.9□□□□□ -0.34
DDX56-206ENST00000446987 STEAP4Q687X5 459 aa12.9□□□□□ -0.34
DDX56-206ENST00000446987 C8orf82Q6P1X6 216 aaPredicted RBP12.9□□□□□ -0.34
DDX56-206ENST00000446987 HORMAD1Q86X24 394 aa12.9□□□□□ -0.34
DDX56-206ENST00000446987 GALNT11Q8NCW6 608 aa12.9□□□□□ -0.34
DDX56-206ENST00000446987 C11orf70Q9BRQ4 267 aa12.9□□□□□ -0.34
DDX56-206ENST00000446987 AASDHPPTQ9NRN7 309 aa12.9□□□□□ -0.34
DDX56-206ENST00000446987 TDP1Q9NUW8 608 aa12.9□□□□□ -0.34
DDX56-206ENST00000446987 KLHL11Q9NVR0 708 aa12.9□□□□□ -0.34
DDX56-206ENST00000446987 OBP2AQ9NY56 170 aa12.9□□□□□ -0.34
DDX56-206ENST00000446987 TMEM181Q9P2C4 612 aa12.9□□□□□ -0.34
DDX56-206ENST00000446987 ZMYM5Q9UJ78 669 aa12.9□□□□□ -0.34
DDX56-206ENST00000446987 GRIP1Q9Y3R0 1128 aa12.9□□□□□ -0.34
DDX56-206ENST00000446987 PCDHGB1Q9Y5G3 927 aa12.9□□□□□ -0.34
DDX56-206ENST00000446987 RNF103-CHMP3A0A140T963 221 aa12.89□□□□□ -0.35
DDX56-206ENST00000446987 SHISA7A6NL88 538 aa12.89□□□□□ -0.35
DDX56-206ENST00000446987 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.89□□□□□ -0.35
DDX56-206ENST00000446987 STX16-NPEPL1H3BU86 382 aa12.89□□□□□ -0.35
DDX56-206ENST00000446987 CST8O60676 142 aa12.89□□□□□ -0.35
DDX56-206ENST00000446987 TIPRLO75663 272 aa12.89□□□□□ -0.35
DDX56-206ENST00000446987 SEC24DO94855 1032 aaPredicted RBP12.89□□□□□ -0.35
DDX56-206ENST00000446987 CKMP06732 381 aa12.89□□□□□ -0.35
DDX56-206ENST00000446987 HDCP19113 662 aa12.89□□□□□ -0.35
DDX56-206ENST00000446987 PTGS2P35354 604 aa12.89□□□□□ -0.35
DDX56-206ENST00000446987 AVPR1AP37288 418 aa12.89□□□□□ -0.35
DDX56-206ENST00000446987 MRPS15P82914 257 aaKnown RBP12.89□□□□□ -0.35
DDX56-206ENST00000446987 ZXDAP98168 799 aa12.89□□□□□ -0.35
DDX56-206ENST00000446987 CLCQ05315 142 aa12.89□□□□□ -0.35
DDX56-206ENST00000446987 TAF5Q15542 800 aa12.89□□□□□ -0.35
DDX56-206ENST00000446987 TYSND1Q2T9J0 566 aa12.89□□□□□ -0.35
DDX56-206ENST00000446987 ZFP69Q49AA0 526 aa12.89□□□□□ -0.35
DDX56-206ENST00000446987 HECTD3Q5T447 861 aa12.89□□□□□ -0.35
DDX56-206ENST00000446987 MFSD6LQ8IWD5 586 aa12.89□□□□□ -0.35
DDX56-206ENST00000446987 RNF148Q8N7C7 305 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms