RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 F7P08709 466 aaPredicted RBP14.5□□□□□ -0.09
HDAC4-204ENST00000446876 CCL4P13236 92 aa14.5□□□□□ -0.09
HDAC4-204ENST00000446876 RBMS1P29558 406 aaKnown RBP14.5□□□□□ -0.09
HDAC4-204ENST00000446876 CASQ1P31415 396 aa14.5□□□□□ -0.09
HDAC4-204ENST00000446876 PAFAH1B1P43034 410 aa14.5□□□□□ -0.09
HDAC4-204ENST00000446876 MRPS25P82663 173 aaKnown RBP14.5□□□□□ -0.09
HDAC4-204ENST00000446876 CLPPQ16740 277 aaPredicted RBP14.5□□□□□ -0.09
HDAC4-204ENST00000446876 LYPLAL1Q5VWZ2 237 aa14.5□□□□□ -0.09
HDAC4-204ENST00000446876 IZUMO3Q5VZ72 239 aa14.5□□□□□ -0.09
HDAC4-204ENST00000446876 PPIL6Q8IXY8 311 aa14.5□□□□□ -0.09
HDAC4-204ENST00000446876 SLCO2A1Q92959 643 aa14.5□□□□□ -0.09
HDAC4-204ENST00000446876 ZNF669Q96BR6 464 aaPredicted RBP14.5□□□□□ -0.09
HDAC4-204ENST00000446876 NAF1Q96HR8 494 aaKnown RBP14.5□□□□□ -0.09
HDAC4-204ENST00000446876 SLC46A1Q96NT5 459 aa14.5□□□□□ -0.09
HDAC4-204ENST00000446876 FCRL3Q96P31 734 aaPredicted RBP14.5□□□□□ -0.09
HDAC4-204ENST00000446876 OR52A5Q9H2C5 316 aa14.5□□□□□ -0.09
HDAC4-204ENST00000446876 VPS37BQ9H9H4 285 aa14.5□□□□□ -0.09
HDAC4-204ENST00000446876 XAB2Q9HCS7 855 aaKnown RBP14.5□□□□□ -0.09
HDAC4-204ENST00000446876 KMT2BQ9UMN6 2715 aaPredicted RBP14.5□□□□□ -0.09
HDAC4-204ENST00000446876 ADAMTS20P59510 1910 aa14.5□□□□□ -0.09
HDAC4-204ENST00000446876 CELSR3Q9NYQ7 3312 aa14.5□□□□□ -0.09
HDAC4-204ENST00000446876 CACNA1BQ00975 2339 aa14.49□□□□□ -0.09
HDAC4-204ENST00000446876 C17orf113A0A1B0GUU1 675 aa14.49□□□□□ -0.09
HDAC4-204ENST00000446876 IQCF5A8MTL0 148 aa14.49□□□□□ -0.09
HDAC4-204ENST00000446876 TTI1O43156 1089 aa14.49□□□□□ -0.09
HDAC4-204ENST00000446876 JMJD7P0C870 316 aa14.49□□□□□ -0.09
HDAC4-204ENST00000446876 MLNP12872 115 aa14.49□□□□□ -0.09
HDAC4-204ENST00000446876 AMD1P17707 334 aa14.49□□□□□ -0.09
HDAC4-204ENST00000446876 MAGEA3P43357 314 aa14.49□□□□□ -0.09
HDAC4-204ENST00000446876 LEPRP48357 1165 aaKnown RBP14.49□□□□□ -0.09
HDAC4-204ENST00000446876 MAPK10P53779 464 aa14.49□□□□□ -0.09
HDAC4-204ENST00000446876 CSE1LP55060 971 aaKnown RBP14.49□□□□□ -0.09
HDAC4-204ENST00000446876 PPP1CAP62136 330 aa14.49□□□□□ -0.09
HDAC4-204ENST00000446876 ETF1P62495 437 aaKnown RBP14.49□□□□□ -0.09
HDAC4-204ENST00000446876 DR1Q01658 176 aa14.49□□□□□ -0.09
HDAC4-204ENST00000446876 EIF3IQ13347 325 aaKnown RBP14.49□□□□□ -0.09
HDAC4-204ENST00000446876 BOP1Q14137 746 aaKnown RBP14.49□□□□□ -0.09
HDAC4-204ENST00000446876 CAPRIN2Q6IMN6 1127 aaKnown RBP14.49□□□□□ -0.09
HDAC4-204ENST00000446876 WDR74Q6RFH5 385 aaPredicted RBP14.49□□□□□ -0.09
HDAC4-204ENST00000446876 CERS6Q6ZMG9 384 aa14.49□□□□□ -0.09
HDAC4-204ENST00000446876 JAMLQ86YT9 394 aa14.49□□□□□ -0.09
HDAC4-204ENST00000446876 LSMEM2Q8N112 164 aa14.49□□□□□ -0.09
HDAC4-204ENST00000446876 KRT222Q8N1A0 295 aa14.49□□□□□ -0.09
HDAC4-204ENST00000446876 SNIP1Q8TAD8 396 aaKnown RBP14.49□□□□□ -0.09
HDAC4-204ENST00000446876 ELMO1Q92556 727 aa14.49□□□□□ -0.09
HDAC4-204ENST00000446876 FGF11Q92914 225 aa14.49□□□□□ -0.09
HDAC4-204ENST00000446876 PMEPA1Q969W9 287 aa14.49□□□□□ -0.09
HDAC4-204ENST00000446876 SGSM3Q96HU1 749 aa14.49□□□□□ -0.09
HDAC4-204ENST00000446876 ZNF578Q96N58 590 aaPredicted RBP14.49□□□□□ -0.09
HDAC4-204ENST00000446876 TTC1Q99614 292 aa14.49□□□□□ -0.09
HDAC4-204ENST00000446876 NRTNQ99748 197 aa14.49□□□□□ -0.09
HDAC4-204ENST00000446876 CMKLR1Q99788 373 aa14.49□□□□□ -0.09
HDAC4-204ENST00000446876 SAMD15Q9P1V8 674 aa14.49□□□□□ -0.09
HDAC4-204ENST00000446876 ANAPC5Q9UJX4 755 aa14.49□□□□□ -0.09
HDAC4-204ENST00000446876 MN1Q10571 1320 aaPredicted RBP14.48□□□□□ -0.09
HDAC4-204ENST00000446876 KLHL33A6NCF5 533 aa14.48□□□□□ -0.09
HDAC4-204ENST00000446876 SDR42E2A6NKP2 422 aa14.48□□□□□ -0.09
HDAC4-204ENST00000446876 CDRT15L2A8MXV6 281 aa14.48□□□□□ -0.09
HDAC4-204ENST00000446876 KRT37O76014 449 aa14.48□□□□□ -0.09
HDAC4-204ENST00000446876 FTH1P02794 183 aa14.48□□□□□ -0.09
HDAC4-204ENST00000446876 ITGA2BP08514 1039 aa14.48□□□□□ -0.09
HDAC4-204ENST00000446876 OR56A5P0C7T3 313 aa14.48□□□□□ -0.09
HDAC4-204ENST00000446876 IVDP26440 423 aa14.48□□□□□ -0.09
HDAC4-204ENST00000446876 CAPZBP47756 277 aa14.48□□□□□ -0.09
HDAC4-204ENST00000446876 ARCN1P48444 511 aaKnown RBP14.48□□□□□ -0.09
HDAC4-204ENST00000446876 C2orf54Q08AI8 447 aa14.48□□□□□ -0.09
HDAC4-204ENST00000446876 PLCL1Q15111 1095 aa14.48□□□□□ -0.09
HDAC4-204ENST00000446876 ANKRD20A4Q4UJ75 823 aa14.48□□□□□ -0.09
HDAC4-204ENST00000446876 AARS2Q5JTZ9 985 aaKnown RBP14.48□□□□□ -0.09
HDAC4-204ENST00000446876 KIAA0930Q6ICG6 404 aaPredicted RBP14.48□□□□□ -0.09
HDAC4-204ENST00000446876 C19orf48Q6RUI8 117 aa14.48□□□□□ -0.09
HDAC4-204ENST00000446876 IGF2-ASQ6U949 168 aa14.48□□□□□ -0.09
HDAC4-204ENST00000446876 RBM12BQ8IXT5 1001 aaKnown RBP14.48□□□□□ -0.09
HDAC4-204ENST00000446876 SIGLEC10Q96LC7 697 aa14.48□□□□□ -0.09
HDAC4-204ENST00000446876 PWWP2AQ96N64 755 aa14.48□□□□□ -0.09
HDAC4-204ENST00000446876 TGM7Q96PF1 710 aa14.48□□□□□ -0.09
HDAC4-204ENST00000446876 KRT12Q99456 494 aa14.48□□□□□ -0.09
HDAC4-204ENST00000446876 DPYSL5Q9BPU6 564 aa14.48□□□□□ -0.09
HDAC4-204ENST00000446876 TRIM31Q9BZY9 425 aa14.48□□□□□ -0.09
HDAC4-204ENST00000446876 EPB41L1Q9H4G0 881 aa14.48□□□□□ -0.09
HDAC4-204ENST00000446876 THSD1Q9NS62 852 aa14.48□□□□□ -0.09
HDAC4-204ENST00000446876 OCIAD1Q9NX40 245 aa14.48□□□□□ -0.09
HDAC4-204ENST00000446876 MAD1L1Q9Y6D9 718 aa14.48□□□□□ -0.09
HDAC4-204ENST00000446876 ANKRD11Q6UB99 2663 aaPredicted RBP14.47□□□□□ -0.09
HDAC4-204ENST00000446876 FAM237BA0A1B0GVD1 139 aa14.47□□□□□ -0.09
HDAC4-204ENST00000446876 UBA6A0AVT1 1052 aaPredicted RBP14.47□□□□□ -0.09
HDAC4-204ENST00000446876 CCDC188H7C350 402 aa14.47□□□□□ -0.09
HDAC4-204ENST00000446876 QSOX1O00391 747 aa14.47□□□□□ -0.09
HDAC4-204ENST00000446876 HGSO14964 777 aaPredicted RBP14.47□□□□□ -0.09
HDAC4-204ENST00000446876 CAPN5O15484 640 aaPredicted RBP14.47□□□□□ -0.09
HDAC4-204ENST00000446876 KIF1CO43896 1103 aaKnown RBP14.47□□□□□ -0.09
HDAC4-204ENST00000446876 NDUFS3O75489 264 aa14.47□□□□□ -0.09
HDAC4-204ENST00000446876 ITPKBP27987 946 aa14.47□□□□□ -0.09
HDAC4-204ENST00000446876 SLC5A2P31639 672 aa14.47□□□□□ -0.09
HDAC4-204ENST00000446876 EIF2S3P41091 472 aaKnown RBP14.47□□□□□ -0.09
HDAC4-204ENST00000446876 TTPAP49638 278 aa14.47□□□□□ -0.09
HDAC4-204ENST00000446876 EIF3BP55884 814 aaKnown RBP14.47□□□□□ -0.09
HDAC4-204ENST00000446876 PCBP4P57723 403 aaKnown RBP14.47□□□□□ -0.09
HDAC4-204ENST00000446876 ERVPABLB-1P60509 514 aa14.47□□□□□ -0.09
HDAC4-204ENST00000446876 TRA2AQ13595 282 aaKnown RBP eCLIP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms