RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 DUSP6Q16828 381 aa17.15■□□□□ 0.34
SMC6-206ENST00000446852 SERPINA13PQ6UXR4 307 aa17.15■□□□□ 0.34
SMC6-206ENST00000446852 KBTBD6Q86V97 674 aa17.15■□□□□ 0.34
SMC6-206ENST00000446852 OR4F6Q8NGB9 312 aa17.15■□□□□ 0.34
SMC6-206ENST00000446852 FGF13Q92913 245 aa17.15■□□□□ 0.34
SMC6-206ENST00000446852 IPPKQ9H8X2 491 aa17.15■□□□□ 0.34
SMC6-206ENST00000446852 SARDHQ9UL12 918 aa17.15■□□□□ 0.34
SMC6-206ENST00000446852 MYO9BQ13459 2157 aa17.15■□□□□ 0.34
SMC6-206ENST00000446852 E7ENX8 843 aa17.14■□□□□ 0.34
SMC6-206ENST00000446852 PAPLNO95428 1278 aa17.14■□□□□ 0.34
SMC6-206ENST00000446852 BAG2O95816 211 aa17.14■□□□□ 0.34
SMC6-206ENST00000446852 CBSLP0DN79 551 aa17.14■□□□□ 0.34
SMC6-206ENST00000446852 AKT1P31749 480 aa17.14■□□□□ 0.34
SMC6-206ENST00000446852 CBSP35520 551 aa17.14■□□□□ 0.34
SMC6-206ENST00000446852 METAP1P53582 386 aa17.14■□□□□ 0.34
SMC6-206ENST00000446852 MS4A2Q01362 244 aa17.14■□□□□ 0.34
SMC6-206ENST00000446852 CREB5Q02930 508 aa17.14■□□□□ 0.34
SMC6-206ENST00000446852 SHHQ15465 462 aa17.14■□□□□ 0.34
SMC6-206ENST00000446852 RETREG3Q86VR2 466 aa17.14■□□□□ 0.34
SMC6-206ENST00000446852 FAM156AQ8NDB6 213 aa17.14■□□□□ 0.34
SMC6-206ENST00000446852 ANKRD27Q96NW4 1050 aa17.14■□□□□ 0.34
SMC6-206ENST00000446852 KLHL42Q9P2K6 505 aa17.14■□□□□ 0.34
SMC6-206ENST00000446852 DKK3Q9UBP4 350 aa17.14■□□□□ 0.34
SMC6-206ENST00000446852 GPR45Q9Y5Y3 372 aa17.14■□□□□ 0.34
SMC6-206ENST00000446852 DOCK8Q8NF50 2099 aa17.14■□□□□ 0.33
SMC6-206ENST00000446852 FADS2P1A8MWK0 482 aa17.14■□□□□ 0.33
SMC6-206ENST00000446852 NR5A2O00482 541 aa17.14■□□□□ 0.33
SMC6-206ENST00000446852 KATNA1O75449 491 aa17.14■□□□□ 0.33
SMC6-206ENST00000446852 ATP1B2P14415 290 aaPredicted RBP17.14■□□□□ 0.33
SMC6-206ENST00000446852 IDO1P14902 403 aa17.14■□□□□ 0.33
SMC6-206ENST00000446852 MMP12P39900 470 aa17.14■□□□□ 0.33
SMC6-206ENST00000446852 KCNC3Q14003 757 aa17.14■□□□□ 0.33
SMC6-206ENST00000446852 GBX1Q14549 363 aa17.14■□□□□ 0.33
SMC6-206ENST00000446852 MUM1Q2TAK8 710 aa17.14■□□□□ 0.33
SMC6-206ENST00000446852 HENMT1Q5T8I9 393 aaKnown RBP17.14■□□□□ 0.33
SMC6-206ENST00000446852 DPPA4Q7L190 304 aa17.14■□□□□ 0.33
SMC6-206ENST00000446852 PARS2Q7L3T8 475 aaKnown RBP17.14■□□□□ 0.33
SMC6-206ENST00000446852 VRK3Q8IV63 474 aa17.14■□□□□ 0.33
SMC6-206ENST00000446852 SFTPA1Q8IWL2 248 aa17.14■□□□□ 0.33
SMC6-206ENST00000446852 METTL6Q8TCB7 284 aa17.14■□□□□ 0.33
SMC6-206ENST00000446852 SMARCD2Q92925 531 aa17.14■□□□□ 0.33
SMC6-206ENST00000446852 LRIG1Q96JA1 1093 aa17.14■□□□□ 0.33
SMC6-206ENST00000446852 HBEGFQ99075 208 aa17.14■□□□□ 0.33
SMC6-206ENST00000446852 RIOK2Q9BVS4 552 aaKnown RBP17.14■□□□□ 0.33
SMC6-206ENST00000446852 CD244Q9BZW8 370 aa17.14■□□□□ 0.33
SMC6-206ENST00000446852 SFXN1Q9H9B4 322 aa17.14■□□□□ 0.33
SMC6-206ENST00000446852 RDH14Q9HBH5 336 aa17.14■□□□□ 0.33
SMC6-206ENST00000446852 WWOXQ9NZC7 414 aa17.14■□□□□ 0.33
SMC6-206ENST00000446852 ITM2BQ9Y287 266 aa17.14■□□□□ 0.33
SMC6-206ENST00000446852 ZFC3H1O60293 1989 aaKnown RBP17.14■□□□□ 0.33
SMC6-206ENST00000446852 SGTAO43765 313 aa17.13■□□□□ 0.33
SMC6-206ENST00000446852 MATN4O95460 622 aa17.13■□□□□ 0.33
SMC6-206ENST00000446852 CAPN3P20807 821 aa17.13■□□□□ 0.33
SMC6-206ENST00000446852 ME2P23368 584 aa17.13■□□□□ 0.33
SMC6-206ENST00000446852 HSPA14Q0VDF9 509 aa17.13■□□□□ 0.33
SMC6-206ENST00000446852 GRIN2CQ14957 1233 aa17.13■□□□□ 0.33
SMC6-206ENST00000446852 SULT1C3Q6IMI6 304 aa17.13■□□□□ 0.33
SMC6-206ENST00000446852 C8orf82Q6P1X6 216 aaPredicted RBP17.13■□□□□ 0.33
SMC6-206ENST00000446852 LAYNQ6UX15 382 aa17.13■□□□□ 0.33
SMC6-206ENST00000446852 Q6ZSR9 355 aa17.13■□□□□ 0.33
SMC6-206ENST00000446852 KBTBD2Q8IY47 623 aa17.13■□□□□ 0.33
SMC6-206ENST00000446852 KIAA1958Q8N8K9 716 aa17.13■□□□□ 0.33
SMC6-206ENST00000446852 GDPD5Q8WTR4 605 aa17.13■□□□□ 0.33
SMC6-206ENST00000446852 UBTD2Q8WUN7 234 aa17.13■□□□□ 0.33
SMC6-206ENST00000446852 DNAJC9Q8WXX5 260 aa17.13■□□□□ 0.33
SMC6-206ENST00000446852 ADA2Q9NZK5 511 aa17.13■□□□□ 0.33
SMC6-206ENST00000446852 H3BNX3 289 aa17.13■□□□□ 0.33
SMC6-206ENST00000446852 OTCP00480 354 aa17.13■□□□□ 0.33
SMC6-206ENST00000446852 HLA-EP13747 358 aa17.13■□□□□ 0.33
SMC6-206ENST00000446852 ST8SIA6P61647 398 aa17.13■□□□□ 0.33
SMC6-206ENST00000446852 FLOT2Q14254 428 aa17.13■□□□□ 0.33
SMC6-206ENST00000446852 GSTA3Q16772 222 aa17.13■□□□□ 0.33
SMC6-206ENST00000446852 ZNF648Q5T619 568 aaPredicted RBP17.13■□□□□ 0.33
SMC6-206ENST00000446852 NAIF1Q69YI7 327 aaPredicted RBP17.13■□□□□ 0.33
SMC6-206ENST00000446852 SPATA19Q7Z5L4 167 aa17.13■□□□□ 0.33
SMC6-206ENST00000446852 ADGRG6Q86SQ4 1221 aa17.13■□□□□ 0.33
SMC6-206ENST00000446852 NAF1Q96HR8 494 aaKnown RBP17.13■□□□□ 0.33
SMC6-206ENST00000446852 SLC39A3Q9BRY0 314 aa17.13■□□□□ 0.33
SMC6-206ENST00000446852 C1orf50Q9BV19 199 aa17.13■□□□□ 0.33
SMC6-206ENST00000446852 AIG1Q9NVV5 245 aa17.13■□□□□ 0.33
SMC6-206ENST00000446852 NFATC1O95644 943 aa17.12■□□□□ 0.33
SMC6-206ENST00000446852 XPAP23025 273 aaPredicted RBP17.12■□□□□ 0.33
SMC6-206ENST00000446852 FSHRP23945 695 aa17.12■□□□□ 0.33
SMC6-206ENST00000446852 PSMD8P48556 350 aa17.12■□□□□ 0.33
SMC6-206ENST00000446852 GTF2A1P52655 376 aaPredicted RBP17.12■□□□□ 0.33
SMC6-206ENST00000446852 BOP1Q14137 746 aaKnown RBP17.12■□□□□ 0.33
SMC6-206ENST00000446852 VPS26BQ4G0F5 336 aa17.12■□□□□ 0.33
SMC6-206ENST00000446852 C6orf136Q5SQH8 315 aa17.12■□□□□ 0.33
SMC6-206ENST00000446852 GET4Q7L5D6 327 aaPredicted RBP17.12■□□□□ 0.33
SMC6-206ENST00000446852 TECPR1Q7Z6L1 1165 aa17.12■□□□□ 0.33
SMC6-206ENST00000446852 ATP6V1E2Q96A05 226 aa17.12■□□□□ 0.33
SMC6-206ENST00000446852 TEX37Q96LM6 180 aa17.12■□□□□ 0.33
SMC6-206ENST00000446852 SLC52A3Q9NQ40 469 aa17.12■□□□□ 0.33
SMC6-206ENST00000446852 NFKBIL1Q9UBC1 381 aaPredicted RBP17.12■□□□□ 0.33
SMC6-206ENST00000446852 OPTCQ9UBM4 332 aa17.12■□□□□ 0.33
SMC6-206ENST00000446852 PDE10AQ9Y233 779 aa17.12■□□□□ 0.33
SMC6-206ENST00000446852 HEPACAM2A8MVW5 462 aa17.12■□□□□ 0.33
SMC6-206ENST00000446852 KPNA3O00505 521 aaPredicted RBP17.12■□□□□ 0.33
SMC6-206ENST00000446852 SPINT1O43278 529 aa17.12■□□□□ 0.33
SMC6-206ENST00000446852 TCN1P20061 433 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms