RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 PRKD2Q9BZL6 878 aa13.76□□□□□ -0.21
VPS52-212ENST00000445902 TSR3Q9UJK0 312 aaKnown RBP13.76□□□□□ -0.21
VPS52-212ENST00000445902 FAM234BA2RU67 622 aa13.76□□□□□ -0.21
VPS52-212ENST00000445902 AGAP5A6NIR3 686 aa13.76□□□□□ -0.21
VPS52-212ENST00000445902 FAM20BO75063 409 aa13.76□□□□□ -0.21
VPS52-212ENST00000445902 PIRTP0C851 137 aa13.76□□□□□ -0.21
VPS52-212ENST00000445902 SOX4Q06945 474 aaPredicted RBP13.76□□□□□ -0.21
VPS52-212ENST00000445902 KIAA0319Q5VV43 1072 aa13.76□□□□□ -0.21
VPS52-212ENST00000445902 FKBP9P1Q75LS8 142 aa13.76□□□□□ -0.21
VPS52-212ENST00000445902 RDH12Q96NR8 316 aa13.76□□□□□ -0.21
VPS52-212ENST00000445902 ACOT13Q9NPJ3 140 aa13.76□□□□□ -0.21
VPS52-212ENST00000445902 TRMT13Q9NUP7 481 aaKnown RBP13.76□□□□□ -0.21
VPS52-212ENST00000445902 C14orf119Q9NWQ9 140 aa13.76□□□□□ -0.21
VPS52-212ENST00000445902 QPCTLQ9NXS2 382 aa13.76□□□□□ -0.21
VPS52-212ENST00000445902 GALPQ9UBC7 116 aa13.76□□□□□ -0.21
VPS52-212ENST00000445902 DKK3Q9UBP4 350 aa13.76□□□□□ -0.21
VPS52-212ENST00000445902 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.76□□□□□ -0.21
VPS52-212ENST00000445902 SNX6Q9UNH7 406 aa13.76□□□□□ -0.21
VPS52-212ENST00000445902 EIF3LQ9Y262 564 aaKnown RBP13.76□□□□□ -0.21
VPS52-212ENST00000445902 LOC100506127A0A0U1RQW1 187 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 PDZK1P1A8MUH7 402 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 DNAJB5O75953 348 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 WISP3O95389 354 aaPredicted RBP13.75□□□□□ -0.21
VPS52-212ENST00000445902 G6PDP11413 515 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 ZNF37AP17032 561 aaPredicted RBP13.75□□□□□ -0.21
VPS52-212ENST00000445902 PRKCAP17252 672 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 CCNCP24863 283 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 ACVR2AP27037 513 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 EPHA2P29317 976 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 CD86P42081 329 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 SERPINH1P50454 418 aaKnown RBP13.75□□□□□ -0.21
VPS52-212ENST00000445902 CLCNKBP51801 687 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 FCGRTP55899 365 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 SLC35A2P78381 396 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 TIAL1Q01085 375 aaKnown RBP eCLIP13.75□□□□□ -0.21
VPS52-212ENST00000445902 TNFAIP1Q13829 316 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 TSNQ15631 228 aaKnown RBP13.75□□□□□ -0.21
VPS52-212ENST00000445902 ZNF181Q2M3W8 571 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 C6orf136Q5SQH8 315 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 RFPL4BQ6ZWI9 263 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 ZFAND4Q86XD8 727 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 REM2Q8IYK8 340 aaPredicted RBP13.75□□□□□ -0.21
VPS52-212ENST00000445902 PHACTR4Q8IZ21 702 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 PARP16Q8N5Y8 322 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 ASCC1Q8N9N2 400 aaKnown RBP13.75□□□□□ -0.21
VPS52-212ENST00000445902 FLAD1Q8NFF5 587 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 TSGA13Q96PP4 275 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 ASB2Q96Q27 587 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 TSPAN18Q96SJ8 248 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 TMEM209Q96SK2 561 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 ATOH8Q96SQ7 321 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 VNN3Q9NY84 501 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 MPP6Q9NZW5 540 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 ASB1Q9Y576 335 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 TIMM13Q9Y5L4 95 aaPredicted RBP13.75□□□□□ -0.21
VPS52-212ENST00000445902 UBA6A0AVT1 1052 aaPredicted RBP13.75□□□□□ -0.21
VPS52-212ENST00000445902 ISPDA4D126 451 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 CDC7O00311 574 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 OR4F21O95013 312 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 NTRK1P04629 796 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 IGFBP5P24593 272 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 CCR1P32246 355 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 SEMA3AQ14563 771 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 ZBTB6Q15916 424 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 FXNQ16595 210 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 KYAT1Q16773 422 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 TPRG1LQ5T0D9 272 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 SYT6Q5T7P8 510 aaPredicted RBP13.75□□□□□ -0.21
VPS52-212ENST00000445902 NXNL2Q5VZ03 156 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 LINC00299Q6ZSB3 139 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 TAC4Q86UU9 113 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 ZFYVE19Q96K21 471 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 KLHL5Q96PQ7 755 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 TTYH2Q9BSA4 534 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 ZBED2Q9BTP6 218 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 NT5MQ9NPB1 228 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 ERAP1Q9NZ08 941 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 HACL1Q9UJ83 578 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 TTC3P53804 2025 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 CENPFP49454 3210 aa13.75□□□□□ -0.21
VPS52-212ENST00000445902 ARVCFO00192 962 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 TGFBR2P37173 567 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 LIPAP38571 399 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 ERVK-8P63133 956 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 GTF2H3Q13889 308 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 PRSS36Q5K4E3 855 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 WSCD1Q658N2 575 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 ANKS6Q68DC2 871 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 CYP4Z1Q86W10 505 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 NIM1KQ8IY84 436 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 BEND7Q8N7W2 519 aaPredicted RBP13.74□□□□□ -0.21
VPS52-212ENST00000445902 AGBL3Q8NEM8 1001 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 REXO5Q96IC2 774 aaKnown RBP13.74□□□□□ -0.21
VPS52-212ENST00000445902 SCN3BQ9NY72 215 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 AGO1Q9UL18 857 aaKnown RBP13.74□□□□□ -0.21
VPS52-212ENST00000445902 TPRKBQ9Y3C4 175 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 POLR3HQ9Y535 204 aaPredicted RBP13.74□□□□□ -0.21
VPS52-212ENST00000445902 FAM172BPA6NC97 362 aa13.74□□□□□ -0.21
VPS52-212ENST00000445902 PABPN1LA6NDY0 278 aaKnown RBP13.74□□□□□ -0.21
VPS52-212ENST00000445902 MYO1GB0I1T2 1018 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms