RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 RASSF1Q9NS23 344 aa16.4■□□□□ 0.22
TCOF1-206ENST00000445265 EHD3Q9NZN3 535 aa16.4■□□□□ 0.22
TCOF1-206ENST00000445265 MYO18AQ92614 2054 aaKnown RBP16.4■□□□□ 0.22
TCOF1-206ENST00000445265 MAPK9P45984 424 aa16.4■□□□□ 0.22
TCOF1-206ENST00000445265 CREMQ03060 361 aa16.4■□□□□ 0.22
TCOF1-206ENST00000445265 PKDCCQ504Y2 493 aa16.4■□□□□ 0.22
TCOF1-206ENST00000445265 RABL3Q5HYI8 236 aa16.4■□□□□ 0.22
TCOF1-206ENST00000445265 ATAD3BQ5T9A4 648 aa16.4■□□□□ 0.22
TCOF1-206ENST00000445265 SNX20Q7Z614 316 aa16.4■□□□□ 0.22
TCOF1-206ENST00000445265 CDK15Q96Q40 435 aa16.4■□□□□ 0.22
TCOF1-206ENST00000445265 TMEM9Q9P0T7 183 aa16.4■□□□□ 0.22
TCOF1-206ENST00000445265 RAPGEFL1Q9UHV5 662 aa16.4■□□□□ 0.22
TCOF1-206ENST00000445265 FCF1Q9Y324 198 aaKnown RBP16.4■□□□□ 0.22
TCOF1-206ENST00000445265 CAB39Q9Y376 341 aaPredicted RBP16.4■□□□□ 0.22
TCOF1-206ENST00000445265 NDUFS2O75306 463 aa16.4■□□□□ 0.22
TCOF1-206ENST00000445265 TSPAN19P0C672 248 aa16.4■□□□□ 0.22
TCOF1-206ENST00000445265 SP3Q02447 781 aa16.4■□□□□ 0.22
TCOF1-206ENST00000445265 ELP6Q0PNE2 266 aa16.4■□□□□ 0.22
TCOF1-206ENST00000445265 GALNT1Q10472 559 aaPredicted RBP16.4■□□□□ 0.22
TCOF1-206ENST00000445265 UPP1Q16831 310 aa16.4■□□□□ 0.22
TCOF1-206ENST00000445265 PDCD4Q53EL6 469 aaKnown RBP16.4■□□□□ 0.22
TCOF1-206ENST00000445265 GOLM1Q8NBJ4 401 aa16.4■□□□□ 0.22
TCOF1-206ENST00000445265 PPCDCQ96CD2 204 aa16.4■□□□□ 0.22
TCOF1-206ENST00000445265 ASAH2Q9NR71 780 aa16.4■□□□□ 0.22
TCOF1-206ENST00000445265 DLEC1Q9Y238 1755 aa16.39■□□□□ 0.21
TCOF1-206ENST00000445265 GRID2O43424 1007 aa16.39■□□□□ 0.21
TCOF1-206ENST00000445265 TALDO1P37837 337 aa16.39■□□□□ 0.21
TCOF1-206ENST00000445265 MAGEA10P43363 369 aaPredicted RBP16.39■□□□□ 0.21
TCOF1-206ENST00000445265 GPR33Q49SQ1 333 aa16.39■□□□□ 0.21
TCOF1-206ENST00000445265 TMBIM1Q969X1 311 aa16.39■□□□□ 0.21
TCOF1-206ENST00000445265 BIRC7Q96CA5 298 aa16.39■□□□□ 0.21
TCOF1-206ENST00000445265 SGK2Q9HBY8 427 aa16.39■□□□□ 0.21
TCOF1-206ENST00000445265 SPACA6W5XKT8 324 aa16.39■□□□□ 0.21
TCOF1-206ENST00000445265 SERPINA1P01009 418 aa16.39■□□□□ 0.21
TCOF1-206ENST00000445265 C8GP07360 202 aa16.39■□□□□ 0.21
TCOF1-206ENST00000445265 GABRR2P28476 465 aa16.39■□□□□ 0.21
TCOF1-206ENST00000445265 SRSF11Q05519 484 aaKnown RBP16.39■□□□□ 0.21
TCOF1-206ENST00000445265 KCNA7Q96RP8 456 aa16.39■□□□□ 0.21
TCOF1-206ENST00000445265 STMN3Q9NZ72 180 aa16.39■□□□□ 0.21
TCOF1-206ENST00000445265 S1PR4O95977 384 aa16.39■□□□□ 0.21
TCOF1-206ENST00000445265 EPORP19235 508 aa16.39■□□□□ 0.21
TCOF1-206ENST00000445265 LSAMPQ13449 338 aa16.39■□□□□ 0.21
TCOF1-206ENST00000445265 TRIQKQ629K1 86 aa16.39■□□□□ 0.21
TCOF1-206ENST00000445265 ANKRD46Q86W74 232 aa16.39■□□□□ 0.21
TCOF1-206ENST00000445265 C11orf65Q8NCR3 313 aa16.39■□□□□ 0.21
TCOF1-206ENST00000445265 OR4A15Q8NGL6 344 aa16.39■□□□□ 0.21
TCOF1-206ENST00000445265 NMUR1Q9HB89 426 aa16.39■□□□□ 0.21
TCOF1-206ENST00000445265 SLC9A3R1O14745 358 aaPredicted RBP16.39■□□□□ 0.21
TCOF1-206ENST00000445265 CNMDO75829 334 aa16.39■□□□□ 0.21
TCOF1-206ENST00000445265 CDK14O94921 469 aa16.39■□□□□ 0.21
TCOF1-206ENST00000445265 ENO2P09104 434 aaPredicted RBP16.39■□□□□ 0.21
TCOF1-206ENST00000445265 C7P10643 843 aa16.39■□□□□ 0.21
TCOF1-206ENST00000445265 CHIT1Q13231 466 aa16.39■□□□□ 0.21
TCOF1-206ENST00000445265 UNC50Q53HI1 259 aa16.39■□□□□ 0.21
TCOF1-206ENST00000445265 ADGRF1Q5T601 910 aa16.39■□□□□ 0.21
TCOF1-206ENST00000445265 GIMAP2Q9UG22 337 aa16.39■□□□□ 0.21
TCOF1-206ENST00000445265 DPP7Q9UHL4 492 aa16.39■□□□□ 0.21
TCOF1-206ENST00000445265 STRCP1A6NGW2 1772 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 ANKRD66B4E2M5 251 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 MFN2O95140 757 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 CD1DP15813 335 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 MAGEA11P43364 429 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 EMX2Q04743 252 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 PPP4R4Q6NUP7 873 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 SLC2A7Q6PXP3 512 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 DSG4Q86SJ6 1040 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 HEATR4Q86WZ0 1026 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 PHACTR4Q8IZ21 702 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 PARP8Q8N3A8 854 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 GUCY1B2O75343 617 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 UGT2B4P06133 528 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 PGGT1BP53609 377 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 TRIM32Q13049 653 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 BEND5Q7L4P6 421 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 SAPCD2Q86UD0 394 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 ZFYVE19Q96K21 471 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 ATG10Q9H0Y0 220 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 WDR6Q9NNW5 1121 aaKnown RBP16.38■□□□□ 0.21
TCOF1-206ENST00000445265 NLE1Q9NVX2 485 aaPredicted RBP16.38■□□□□ 0.21
TCOF1-206ENST00000445265 CFAP97Q9P2B7 532 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 NOBOXO60393 691 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 PDE9AO76083 593 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 AQP1P29972 269 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 MAGEA3P43357 314 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 GSTM5P46439 218 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 ALDH3A2P51648 485 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 CSNK2BP67870 215 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 GRIK2Q13002 908 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 ALFQ53S48 1182 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 RANBP10Q6VN20 620 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 ZNF534Q76KX8 674 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 MINDY1Q8N5J2 469 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 EEF1AKMT1Q8WVE0 214 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 CCSER2Q9H7U1 834 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 GSTK1Q9Y2Q3 226 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 PTGESO14684 152 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 DGKQP52824 942 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 OR52E8Q6IFG1 317 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 CAPN13Q6MZZ7 669 aaPredicted RBP16.38■□□□□ 0.21
TCOF1-206ENST00000445265 TTC29Q8NA56 475 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms