RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 HEBP2Q9Y5Z4 205 aa18.41■□□□□ 0.54
ATPAF2-201ENST00000444058 COLEC10Q9Y6Z7 277 aa18.41■□□□□ 0.54
ATPAF2-201ENST00000444058 CEP104O60308 925 aa18.4■□□□□ 0.54
ATPAF2-201ENST00000444058 ETS1P14921 441 aa18.4■□□□□ 0.54
ATPAF2-201ENST00000444058 GRIA1P42261 906 aa18.4■□□□□ 0.54
ATPAF2-201ENST00000444058 CD151P48509 253 aa18.4■□□□□ 0.54
ATPAF2-201ENST00000444058 ATP1A2P50993 1020 aa18.4■□□□□ 0.54
ATPAF2-201ENST00000444058 RPA4Q13156 261 aa18.4■□□□□ 0.54
ATPAF2-201ENST00000444058 ZNF658BQ4V348 819 aaPredicted RBP18.4■□□□□ 0.54
ATPAF2-201ENST00000444058 MANEAQ5SRI9 462 aa18.4■□□□□ 0.54
ATPAF2-201ENST00000444058 LYPLAL1Q5VWZ2 237 aa18.4■□□□□ 0.54
ATPAF2-201ENST00000444058 PACS1Q6VY07 963 aa18.4■□□□□ 0.54
ATPAF2-201ENST00000444058 PIANPQ8IYJ0 282 aa18.4■□□□□ 0.54
ATPAF2-201ENST00000444058 GLIS1Q8NBF1 620 aa18.4■□□□□ 0.54
ATPAF2-201ENST00000444058 OR13J1Q8NGT2 312 aa18.4■□□□□ 0.54
ATPAF2-201ENST00000444058 KLHL6Q8WZ60 621 aa18.4■□□□□ 0.54
ATPAF2-201ENST00000444058 NKD1Q969G9 470 aa18.4■□□□□ 0.54
ATPAF2-201ENST00000444058 C12orf66Q96MD2 445 aa18.4■□□□□ 0.54
ATPAF2-201ENST00000444058 TGM7Q96PF1 710 aa18.4■□□□□ 0.54
ATPAF2-201ENST00000444058 KIR3DX1Q9H7L2 352 aa18.4■□□□□ 0.54
ATPAF2-201ENST00000444058 POLR1CO15160 346 aaPredicted RBP18.39■□□□□ 0.53
ATPAF2-201ENST00000444058 FOXN2P32314 431 aa18.39■□□□□ 0.53
ATPAF2-201ENST00000444058 LEPRP48357 1165 aaKnown RBP18.39■□□□□ 0.53
ATPAF2-201ENST00000444058 IL11RAQ14626 422 aa18.39■□□□□ 0.53
ATPAF2-201ENST00000444058 DBN1Q16643 649 aa18.39■□□□□ 0.53
ATPAF2-201ENST00000444058 CCDC38Q502W7 563 aa18.39■□□□□ 0.53
ATPAF2-201ENST00000444058 TSTD2Q5T7W7 516 aa18.39■□□□□ 0.53
ATPAF2-201ENST00000444058 ZNF449Q6P9G9 518 aa18.39■□□□□ 0.53
ATPAF2-201ENST00000444058 CERS6Q6ZMG9 384 aa18.39■□□□□ 0.53
ATPAF2-201ENST00000444058 PRUNE1Q86TP1 453 aa18.39■□□□□ 0.53
ATPAF2-201ENST00000444058 SPDYE1Q8NFV5 336 aaPredicted RBP18.39■□□□□ 0.53
ATPAF2-201ENST00000444058 NAT14Q8WUY8 206 aa18.39■□□□□ 0.53
ATPAF2-201ENST00000444058 UBXN4Q92575 508 aa18.39■□□□□ 0.53
ATPAF2-201ENST00000444058 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.39■□□□□ 0.53
ATPAF2-201ENST00000444058 RMDN2Q96LZ7 410 aa18.39■□□□□ 0.53
ATPAF2-201ENST00000444058 CD180Q99467 661 aa18.39■□□□□ 0.53
ATPAF2-201ENST00000444058 TTC1Q99614 292 aa18.39■□□□□ 0.53
ATPAF2-201ENST00000444058 COG4Q9H9E3 785 aa18.39■□□□□ 0.53
ATPAF2-201ENST00000444058 SLC24A2Q9UI40 661 aa18.39■□□□□ 0.53
ATPAF2-201ENST00000444058 PILRAQ9UKJ1 303 aa18.39■□□□□ 0.53
ATPAF2-201ENST00000444058 MGAQ8IWI9 3026 aa18.39■□□□□ 0.53
ATPAF2-201ENST00000444058 CCDC162PA2VCL2 907 aa18.38■□□□□ 0.53
ATPAF2-201ENST00000444058 EIF4E1BA6NMX2 242 aaKnown RBP18.38■□□□□ 0.53
ATPAF2-201ENST00000444058 RASSF9O75901 435 aa18.38■□□□□ 0.53
ATPAF2-201ENST00000444058 POLBP06746 335 aa18.38■□□□□ 0.53
ATPAF2-201ENST00000444058 ZSCAN5DPP0CG00 497 aa18.38■□□□□ 0.53
ATPAF2-201ENST00000444058 CDK16Q00536 496 aa18.38■□□□□ 0.53
ATPAF2-201ENST00000444058 GSE1Q14687 1217 aa18.38■□□□□ 0.53
ATPAF2-201ENST00000444058 PLCL1Q15111 1095 aa18.38■□□□□ 0.53
ATPAF2-201ENST00000444058 CACHD1Q5VU97 1274 aa18.38■□□□□ 0.53
ATPAF2-201ENST00000444058 IRGCQ6NXR0 463 aa18.38■□□□□ 0.53
ATPAF2-201ENST00000444058 CYB5D1Q6P9G0 228 aa18.38■□□□□ 0.53
ATPAF2-201ENST00000444058 AFTPHQ6ULP2 937 aa18.38■□□□□ 0.53
ATPAF2-201ENST00000444058 GSTA5Q7RTV2 222 aa18.38■□□□□ 0.53
ATPAF2-201ENST00000444058 CARFQ8N187 725 aa18.38■□□□□ 0.53
ATPAF2-201ENST00000444058 CLDN19Q8N6F1 224 aa18.38■□□□□ 0.53
ATPAF2-201ENST00000444058 OR52A5Q9H2C5 316 aa18.38■□□□□ 0.53
ATPAF2-201ENST00000444058 TRIT1Q9H3H1 467 aaKnown RBP18.38■□□□□ 0.53
ATPAF2-201ENST00000444058 TTC7AQ9ULT0 858 aaPredicted RBP18.38■□□□□ 0.53
ATPAF2-201ENST00000444058 TCAF1Q9Y4C2 921 aa18.38■□□□□ 0.53
ATPAF2-201ENST00000444058 TMEM184BQ9Y519 407 aaPredicted RBP18.38■□□□□ 0.53
ATPAF2-201ENST00000444058 SDK2Q58EX2 2172 aa18.37■□□□□ 0.53
ATPAF2-201ENST00000444058 OR5K3A6NET4 321 aa18.37■□□□□ 0.53
ATPAF2-201ENST00000444058 F8W8V4 182 aa18.37■□□□□ 0.53
ATPAF2-201ENST00000444058 IFRD1O00458 451 aaPredicted RBP18.37■□□□□ 0.53
ATPAF2-201ENST00000444058 PRSS56P0CW18 603 aa18.37■□□□□ 0.53
ATPAF2-201ENST00000444058 NELFEP18615 380 aaKnown RBP18.37■□□□□ 0.53
ATPAF2-201ENST00000444058 MAP4P27816 1152 aaKnown RBP18.37■□□□□ 0.53
ATPAF2-201ENST00000444058 CXCR5P32302 372 aa18.37■□□□□ 0.53
ATPAF2-201ENST00000444058 PCID2Q5JVF3 399 aa18.37■□□□□ 0.53
ATPAF2-201ENST00000444058 PCSK4Q6UW60 755 aa18.37■□□□□ 0.53
ATPAF2-201ENST00000444058 KMT5CQ86Y97 462 aa18.37■□□□□ 0.53
ATPAF2-201ENST00000444058 RASGEF1CQ8N431 466 aa18.37■□□□□ 0.53
ATPAF2-201ENST00000444058 LILRA3Q8N6C8 439 aaPredicted RBP18.37■□□□□ 0.53
ATPAF2-201ENST00000444058 PRELID2Q8N945 189 aa18.37■□□□□ 0.53
ATPAF2-201ENST00000444058 ZSCAN1Q8NBB4 408 aa18.37■□□□□ 0.53
ATPAF2-201ENST00000444058 PPHLN1Q8NEY8 458 aaKnown RBP18.37■□□□□ 0.53
ATPAF2-201ENST00000444058 OR4L1Q8NH43 312 aa18.37■□□□□ 0.53
ATPAF2-201ENST00000444058 SLC39A7Q92504 469 aa18.37■□□□□ 0.53
ATPAF2-201ENST00000444058 TTC9Q92623 222 aa18.37■□□□□ 0.53
ATPAF2-201ENST00000444058 HDAC10Q969S8 669 aa18.37■□□□□ 0.53
ATPAF2-201ENST00000444058 SLC41A2Q96JW4 573 aa18.37■□□□□ 0.53
ATPAF2-201ENST00000444058 PBKQ96KB5 322 aa18.37■□□□□ 0.53
ATPAF2-201ENST00000444058 IL22Q9GZX6 179 aa18.37■□□□□ 0.53
ATPAF2-201ENST00000444058 SMARCAL1Q9NZC9 954 aa18.37■□□□□ 0.53
ATPAF2-201ENST00000444058 FAM8A1Q9UBU6 413 aa18.37■□□□□ 0.53
ATPAF2-201ENST00000444058 CFAP20Q9Y6A4 193 aaKnown RBP18.37■□□□□ 0.53
ATPAF2-201ENST00000444058 ATRXP46100 2492 aa18.37■□□□□ 0.53
ATPAF2-201ENST00000444058 GOLGA6L3A6NEY3 463 aa18.36■□□□□ 0.53
ATPAF2-201ENST00000444058 LIN7AO14910 233 aaPredicted RBP18.36■□□□□ 0.53
ATPAF2-201ENST00000444058 KIF1CO43896 1103 aaKnown RBP18.36■□□□□ 0.53
ATPAF2-201ENST00000444058 RAD1O60671 282 aa18.36■□□□□ 0.53
ATPAF2-201ENST00000444058 FTH1P02794 183 aa18.36■□□□□ 0.53
ATPAF2-201ENST00000444058 ITGB2P05107 769 aa18.36■□□□□ 0.53
ATPAF2-201ENST00000444058 PPARGP37231 505 aaPredicted RBP18.36■□□□□ 0.53
ATPAF2-201ENST00000444058 NPY2RP49146 381 aa18.36■□□□□ 0.53
ATPAF2-201ENST00000444058 PLOD1Q02809 727 aaPredicted RBP18.36■□□□□ 0.53
ATPAF2-201ENST00000444058 MAP7Q14244 749 aa18.36■□□□□ 0.53
ATPAF2-201ENST00000444058 KRT33BQ14525 404 aa18.36■□□□□ 0.53
ATPAF2-201ENST00000444058 ARMC3Q5W041 872 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms