RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 ERVK-10P10266 1014 aa12.56□□□□□ -0.4
PDLIM2-212ENST00000443561 MTHFD1P11586 935 aaKnown RBP12.56□□□□□ -0.4
PDLIM2-212ENST00000443561 IDSP22304 550 aa12.56□□□□□ -0.4
PDLIM2-212ENST00000443561 ACADLP28330 430 aa12.56□□□□□ -0.4
PDLIM2-212ENST00000443561 PPP1CAP62136 330 aa12.56□□□□□ -0.4
PDLIM2-212ENST00000443561 E2F1Q01094 437 aa12.56□□□□□ -0.4
PDLIM2-212ENST00000443561 ZFP36L1Q07352 338 aaKnown RBP12.56□□□□□ -0.4
PDLIM2-212ENST00000443561 GPR18Q14330 331 aa12.56□□□□□ -0.4
PDLIM2-212ENST00000443561 HIF1AQ16665 826 aa12.56□□□□□ -0.4
PDLIM2-212ENST00000443561 LONRF1Q17RB8 773 aa12.56□□□□□ -0.4
PDLIM2-212ENST00000443561 ISXQ2M1V0 245 aa12.56□□□□□ -0.4
PDLIM2-212ENST00000443561 LYPLAL1Q5VWZ2 237 aa12.56□□□□□ -0.4
PDLIM2-212ENST00000443561 ZNF470Q6ECI4 717 aa12.56□□□□□ -0.4
PDLIM2-212ENST00000443561 NEPROQ6NW34 567 aa12.56□□□□□ -0.4
PDLIM2-212ENST00000443561 ANKMY2Q8IV38 441 aa12.56□□□□□ -0.4
PDLIM2-212ENST00000443561 CFAP206Q8IYR0 622 aa12.56□□□□□ -0.4
PDLIM2-212ENST00000443561 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.56□□□□□ -0.4
PDLIM2-212ENST00000443561 FOXP3Q9BZS1 431 aa12.56□□□□□ -0.4
PDLIM2-212ENST00000443561 SEMA6CQ9H3T2 930 aa12.56□□□□□ -0.4
PDLIM2-212ENST00000443561 FBXO6Q9NRD1 293 aaPredicted RBP12.56□□□□□ -0.4
PDLIM2-212ENST00000443561 SAMD15Q9P1V8 674 aa12.56□□□□□ -0.4
PDLIM2-212ENST00000443561 CLCA2Q9UQC9 943 aa12.56□□□□□ -0.4
PDLIM2-212ENST00000443561 MAGEB16A2A368 324 aa12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 RHPN2P1A8MT19 583 aa12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 KIF2AO00139 706 aaPredicted RBP12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 GPC4O75487 556 aa12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 PIAS1O75925 651 aa12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 TUBB4AP04350 444 aa12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 RALBP11234 206 aa12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 AOAHP28039 575 aa12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 ALDH4A1P30038 563 aa12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 ABCG1P45844 678 aa12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 GPR3P46089 330 aa12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 TTPAP49638 278 aa12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 PGGT1BP53609 377 aa12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 GFERP55789 205 aa12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 GPX6P59796 221 aa12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 PDIA2Q13087 525 aaKnown RBP12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 SQSTM1Q13501 440 aa12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 BRD3Q15059 726 aa12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 HSP90AA5PQ58FG0 334 aa12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 DNAJC21Q5F1R6 531 aaKnown RBP12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 CNSTQ6PJW8 725 aa12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 TMEM26Q6ZUK4 368 aa12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 MAATS1Q7Z4T9 603 aa12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 KCNMB4Q86W47 210 aa12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 CNTN4Q8IWV2 1026 aa12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 FBXO36Q8NEA4 188 aa12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 OR6C4Q8NGE1 309 aa12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 KIF18AQ8NI77 898 aa12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 RSC1A1Q92681 617 aa12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 CFAP36Q96G28 342 aa12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 ATXN7L3BQ96GX2 97 aa12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 C12orf66Q96MD2 445 aa12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 MCMBPQ9BTE3 642 aa12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 CARD6Q9BX69 1037 aa12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 TWSG1Q9GZX9 223 aa12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 UCK1Q9HA47 277 aa12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 C20orf96Q9NUD7 363 aaPredicted RBP12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 POT1Q9NUX5 634 aa12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 FBXO5Q9UKT4 447 aa12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 CRYL1Q9Y2S2 319 aa12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 PSAT1Q9Y617 370 aa12.55□□□□□ -0.4
PDLIM2-212ENST00000443561 TPRP12270 2363 aaKnown RBP12.54□□□□□ -0.4
PDLIM2-212ENST00000443561 IGHV5-10-1A0A0J9YXX1 117 aa12.54□□□□□ -0.4
PDLIM2-212ENST00000443561 KRT87PA6NCN2 255 aa12.54□□□□□ -0.4
PDLIM2-212ENST00000443561 OR5K4A6NMS3 321 aa12.54□□□□□ -0.4
PDLIM2-212ENST00000443561 SMAPO00193 183 aa12.54□□□□□ -0.4
PDLIM2-212ENST00000443561 TCEA3O75764 348 aa12.54□□□□□ -0.4
PDLIM2-212ENST00000443561 CDK4P11802 303 aa12.54□□□□□ -0.4
PDLIM2-212ENST00000443561 FMO4P31512 558 aa12.54□□□□□ -0.4
PDLIM2-212ENST00000443561 ADARP55265 1226 aaKnown RBP12.54□□□□□ -0.4
PDLIM2-212ENST00000443561 EIF3BP55884 814 aaKnown RBP12.54□□□□□ -0.4
PDLIM2-212ENST00000443561 ARL4CP56559 192 aa12.54□□□□□ -0.4
PDLIM2-212ENST00000443561 C16orf72Q14CZ0 275 aa12.54□□□□□ -0.4
PDLIM2-212ENST00000443561 AMZ1Q400G9 498 aa12.54□□□□□ -0.4
PDLIM2-212ENST00000443561 AARS2Q5JTZ9 985 aaKnown RBP12.54□□□□□ -0.4
PDLIM2-212ENST00000443561 SPANXN3Q5MJ09 141 aa12.54□□□□□ -0.4
PDLIM2-212ENST00000443561 RBM20Q5T481 1227 aaKnown RBP12.54□□□□□ -0.4
PDLIM2-212ENST00000443561 C8orf74Q6P047 294 aa12.54□□□□□ -0.4
PDLIM2-212ENST00000443561 RBM44Q6ZP01 1051 aaKnown RBP12.54□□□□□ -0.4
PDLIM2-212ENST00000443561 USP53Q70EK8 1073 aa12.54□□□□□ -0.4
PDLIM2-212ENST00000443561 SLC9B2Q86UD5 537 aa12.54□□□□□ -0.4
PDLIM2-212ENST00000443561 PDZD3Q86UT5 571 aa12.54□□□□□ -0.4
PDLIM2-212ENST00000443561 PDIK1LQ8N165 341 aa12.54□□□□□ -0.4
PDLIM2-212ENST00000443561 GALNT15Q8N3T1 639 aa12.54□□□□□ -0.4
PDLIM2-212ENST00000443561 C2CD4AQ8NCU7 369 aaPredicted RBP12.54□□□□□ -0.4
PDLIM2-212ENST00000443561 ACVR1CQ8NER5 493 aa12.54□□□□□ -0.4
PDLIM2-212ENST00000443561 ELMO1Q92556 727 aa12.54□□□□□ -0.4
PDLIM2-212ENST00000443561 FAM136AQ96C01 138 aa12.54□□□□□ -0.4
PDLIM2-212ENST00000443561 LRRC39Q96DD0 335 aa12.54□□□□□ -0.4
PDLIM2-212ENST00000443561 CERS2Q96G23 380 aa12.54□□□□□ -0.4
PDLIM2-212ENST00000443561 GFM1Q96RP9 751 aaKnown RBP12.54□□□□□ -0.4
PDLIM2-212ENST00000443561 MENTQ9BUN1 341 aa12.54□□□□□ -0.4
PDLIM2-212ENST00000443561 SYNDIG1Q9H7V2 258 aa12.54□□□□□ -0.4
PDLIM2-212ENST00000443561 L2HGDHQ9H9P8 463 aa12.54□□□□□ -0.4
PDLIM2-212ENST00000443561 IARS2Q9NSE4 1012 aaKnown RBP12.54□□□□□ -0.4
PDLIM2-212ENST00000443561 IMP3Q9NV31 184 aaKnown RBP12.54□□□□□ -0.4
PDLIM2-212ENST00000443561 EVA1BQ9NVM1 165 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms