RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 CFHR1Q03591 330 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 ITGA9Q13797 1035 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 OASLQ15646 514 aaKnown RBP8.61□□□□□ -1.03
USP6NL-203ENST00000443016 TMEM95Q3KNT9 176 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 WDR74Q6RFH5 385 aaPredicted RBP8.61□□□□□ -1.03
USP6NL-203ENST00000443016 IL22RA1Q8N6P7 574 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 APOL2Q9BQE5 337 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 TIMM29Q9BSF4 260 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 FICDQ9BVA6 458 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 TBC1D10AQ9BXI6 508 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 GBA3Q9H227 469 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 UGT1A7Q9HAW7 530 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 UGT1A10Q9HAW8 530 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 UGT1A8Q9HAW9 530 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 IL17CQ9P0M4 197 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 SLC23A2Q9UGH3 650 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 FLNBO75369 2602 aaKnown RBP8.61□□□□□ -1.03
USP6NL-203ENST00000443016 ZFC3H1O60293 1989 aaKnown RBP8.6□□□□□ -1.03
USP6NL-203ENST00000443016 A6NCN8 305 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 EFCAB7A8K855 629 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 TYRP1P17643 537 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 AMD1P17707 334 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 HALP42357 657 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 EPHA4P54764 986 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 CHRNA6Q15825 494 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 ANKRD20A2Q5SQ80 823 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 LDLRAP1Q5SW96 308 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 DCAF12Q5T6F0 453 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 ANKRD20A1Q5TYW2 823 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 ANKRD20A3Q5VUR7 823 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 C4orf22Q6V702 233 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 VASH2Q86V25 355 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 PLXDC1Q8IUK5 500 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 CXorf40BQ96DE9 158 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 TMEM121Q9BTD3 319 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 EPB41L1Q9H4G0 881 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 OCIAD1Q9NX40 245 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 UTP11Q9Y3A2 253 aaKnown RBP8.6□□□□□ -1.03
USP6NL-203ENST00000443016 B3GALT1Q9Y5Z6 326 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 ARL5AQ9Y689 179 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 OR2AG2A6NM03 316 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 OR52A4PA6NMU1 304 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 GPR39O43194 453 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 PIP5K1CO60331 668 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 PRAMEF1O95521 474 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 IFNB1P01574 187 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 XRCC1P18887 633 aaPredicted RBP8.6□□□□□ -1.03
USP6NL-203ENST00000443016 MSH3P20585 1137 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 LPOP22079 712 aaPredicted RBP8.6□□□□□ -1.03
USP6NL-203ENST00000443016 PSMB4P28070 264 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 ATP1A2P50993 1020 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 CLCNKAP51800 687 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 RAB15P59190 212 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 LY6DQ14210 128 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 KHDC1Q4VXA5 237 aaKnown RBP8.6□□□□□ -1.03
USP6NL-203ENST00000443016 TTC27Q6P3X3 843 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 AMZ2Q86W34 360 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 ZNF547Q8IVP9 402 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 NOA1Q8NC60 698 aaKnown RBP8.6□□□□□ -1.03
USP6NL-203ENST00000443016 CCDC110Q8TBZ0 833 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 SNRNP27Q8WVK2 155 aaKnown RBP8.6□□□□□ -1.03
USP6NL-203ENST00000443016 ARHGAP9Q9BRR9 750 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 SCHIP1Q9P0W5 487 aaPredicted RBP8.6□□□□□ -1.03
USP6NL-203ENST00000443016 ASIC3Q9UHC3 531 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 COL6A6A6NMZ7 2263 aa8.6□□□□□ -1.03
USP6NL-203ENST00000443016 C5orf60A6NFR6 353 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 TTC36A6NLP5 189 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 TTI1O43156 1089 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 RAD51CO43502 376 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 RASSF9O75901 435 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 UBXN7O94888 489 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 CRTAMO95727 393 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 MCM3P25205 808 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 SLC19A1P41440 591 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 KCNJ1P48048 391 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 PTK6Q13882 451 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 P3H1Q32P28 736 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 GRAMD1BQ3KR37 738 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 FNBP1LQ5T0N5 605 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 GPRC6AQ5T6X5 926 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 ARHGEF18Q6ZSZ5 1173 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 TMEM26Q6ZUK4 368 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 OR4K2Q8NGD2 314 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 ZNF398Q8TD17 642 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 SGF29Q96ES7 293 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 SPATA13Q96N96 652 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 PPP1R2P1Q96PQ5 205 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 B3GNT4Q9C0J1 378 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 POT1Q9NUX5 634 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 ZIM2Q9NZV7 527 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 PAK5Q9P286 719 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 FAM8A1Q9UBU6 413 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 TMPRSS11EQ9UL52 423 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 PCDHGA3Q9Y5H0 932 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 LILRA5A6NI73 299 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 C3orf80F5H4A9 247 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 EFSO43281 561 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 POP7O75817 140 aaKnown RBP8.59□□□□□ -1.03
USP6NL-203ENST00000443016 KRT14P02533 472 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 PBLDP30039 288 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms