RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 CYP2S1Q96SQ9 504 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 TBCDQ9BTW9 1192 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 SP140LQ9H930 580 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 PARVBQ9HBI1 364 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 SMPD4Q9NXE4 827 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 IL37Q9NZH6 218 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 C3orf18Q9UK00 162 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 ZNF225Q9UK10 706 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 NUDT5Q9UKK9 219 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 IKZF3Q9UKT9 509 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 TESMINQ9Y4I5 508 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 FAM234BA2RU67 622 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 BCKDKO14874 412 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 VPS4BO75351 444 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 ZNF37AP17032 561 aaPredicted RBP20■□□□□ 0.79
SHOX2-203ENST00000441443 PFKLP17858 780 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 PSEN2P49810 448 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 EPS8Q12929 822 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 PRKG2Q13237 762 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 UBE2UQ5VVX9 321 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 LAIR1Q6GTX8 287 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 ZNF467Q7Z7K2 595 aaPredicted RBP20■□□□□ 0.79
SHOX2-203ENST00000441443 ZMIZ2Q8NF64 920 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 ZNF583Q96ND8 569 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 TMEM209Q96SK2 561 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 UGT2B28Q9BY64 529 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 ACTR8Q9H981 624 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 PRKD3O94806 890 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 PAX3P23760 479 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 NEK2P51955 445 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 LILRB4Q8NHJ6 448 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 GAD1Q99259 594 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 BRINP2Q9C0B6 783 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 RNF112Q9ULX5 631 aa20■□□□□ 0.79
SHOX2-203ENST00000441443 PLXNB2O15031 1838 aa19.99■□□□□ 0.79
SHOX2-203ENST00000441443 FDXRP22570 491 aa19.99■□□□□ 0.79
SHOX2-203ENST00000441443 CD86P42081 329 aa19.99■□□□□ 0.79
SHOX2-203ENST00000441443 VAC14Q08AM6 782 aa19.99■□□□□ 0.79
SHOX2-203ENST00000441443 SMN1Q16637 294 aaKnown RBP19.99■□□□□ 0.79
SHOX2-203ENST00000441443 FAM110CQ1W6H9 321 aa19.99■□□□□ 0.79
SHOX2-203ENST00000441443 FNDC1Q4ZHG4 1894 aaPredicted RBP19.99■□□□□ 0.79
SHOX2-203ENST00000441443 ALKAL1Q6UXT8 129 aa19.99■□□□□ 0.79
SHOX2-203ENST00000441443 B3GNT8Q7Z7M8 397 aa19.99■□□□□ 0.79
SHOX2-203ENST00000441443 FAM126BQ8IXS8 530 aa19.99■□□□□ 0.79
SHOX2-203ENST00000441443 PSD4Q8NDX1 1056 aa19.99■□□□□ 0.79
SHOX2-203ENST00000441443 OR10A6Q8NH74 314 aa19.99■□□□□ 0.79
SHOX2-203ENST00000441443 CRTAC1Q9NQ79 661 aa19.99■□□□□ 0.79
SHOX2-203ENST00000441443 NEU3Q9UQ49 428 aa19.99■□□□□ 0.79
SHOX2-203ENST00000441443 SMIM35A0A1B0GVV1 85 aa19.99■□□□□ 0.79
SHOX2-203ENST00000441443 RAD51BO15315 384 aa19.99■□□□□ 0.79
SHOX2-203ENST00000441443 DYRK3O43781 588 aa19.99■□□□□ 0.79
SHOX2-203ENST00000441443 DFNA5O60443 496 aa19.99■□□□□ 0.79
SHOX2-203ENST00000441443 NDST3O95803 873 aa19.99■□□□□ 0.79
SHOX2-203ENST00000441443 F9P00740 461 aa19.99■□□□□ 0.79
SHOX2-203ENST00000441443 MT-ND2P03891 347 aa19.99■□□□□ 0.79
SHOX2-203ENST00000441443 CCDC159P0C7I6 412 aa19.99■□□□□ 0.79
SHOX2-203ENST00000441443 SLC26A3P40879 764 aa19.99■□□□□ 0.79
SHOX2-203ENST00000441443 CASP3P42574 277 aa19.99■□□□□ 0.79
SHOX2-203ENST00000441443 ACOX1Q15067 660 aa19.99■□□□□ 0.79
SHOX2-203ENST00000441443 C6orf136Q5SQH8 315 aa19.99■□□□□ 0.79
SHOX2-203ENST00000441443 RSBN1Q5VWQ0 802 aaPredicted RBP19.99■□□□□ 0.79
SHOX2-203ENST00000441443 ANKS6Q68DC2 871 aa19.99■□□□□ 0.79
SHOX2-203ENST00000441443 NECAB2Q7Z6G3 386 aa19.99■□□□□ 0.79
SHOX2-203ENST00000441443 ZFAND4Q86XD8 727 aa19.99■□□□□ 0.79
SHOX2-203ENST00000441443 GALNT13Q8IUC8 556 aa19.99■□□□□ 0.79
SHOX2-203ENST00000441443 CCDC103Q8IW40 242 aa19.99■□□□□ 0.79
SHOX2-203ENST00000441443 ZHX1-C8orf76Q96EF9 292 aa19.99■□□□□ 0.79
SHOX2-203ENST00000441443 PGAP3Q96FM1 320 aaPredicted RBP19.99■□□□□ 0.79
SHOX2-203ENST00000441443 ZNF599Q96NL3 588 aa19.99■□□□□ 0.79
SHOX2-203ENST00000441443 CDK15Q96Q40 435 aa19.99■□□□□ 0.79
SHOX2-203ENST00000441443 MPP6Q9NZW5 540 aa19.99■□□□□ 0.79
SHOX2-203ENST00000441443 ACVR2AP27037 513 aa19.98■□□□□ 0.79
SHOX2-203ENST00000441443 CCR1P32246 355 aa19.98■□□□□ 0.79
SHOX2-203ENST00000441443 DCTP40126 519 aa19.98■□□□□ 0.79
SHOX2-203ENST00000441443 ARL1P40616 181 aaPredicted RBP19.98■□□□□ 0.79
SHOX2-203ENST00000441443 ERVK-8P63133 956 aa19.98■□□□□ 0.79
SHOX2-203ENST00000441443 RBBP7Q16576 425 aa19.98■□□□□ 0.79
SHOX2-203ENST00000441443 KDELC1Q6UW63 502 aa19.98■□□□□ 0.79
SHOX2-203ENST00000441443 SPATC1Q76KD6 591 aa19.98■□□□□ 0.79
SHOX2-203ENST00000441443 DCP2Q8IU60 420 aaKnown RBP19.98■□□□□ 0.79
SHOX2-203ENST00000441443 OR2T12Q8NG77 320 aa19.98■□□□□ 0.79
SHOX2-203ENST00000441443 ATL1Q8WXF7 558 aa19.98■□□□□ 0.79
SHOX2-203ENST00000441443 C6orf62Q9GZU0 229 aaPredicted RBP19.98■□□□□ 0.79
SHOX2-203ENST00000441443 AP5M1Q9H0R1 490 aa19.98■□□□□ 0.79
SHOX2-203ENST00000441443 NT5MQ9NPB1 228 aa19.98■□□□□ 0.79
SHOX2-203ENST00000441443 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.98■□□□□ 0.79
SHOX2-203ENST00000441443 VAPAQ9P0L0 249 aa19.98■□□□□ 0.79
SHOX2-203ENST00000441443 GALPQ9UBC7 116 aa19.98■□□□□ 0.79
SHOX2-203ENST00000441443 FAM50BQ9Y247 325 aa19.98■□□□□ 0.79
SHOX2-203ENST00000441443 PCDHB14Q9Y5E9 798 aa19.98■□□□□ 0.79
SHOX2-203ENST00000441443 MYBPHLA2RUH7 354 aa19.98■□□□□ 0.79
SHOX2-203ENST00000441443 PRSS56P0CW18 603 aa19.98■□□□□ 0.79
SHOX2-203ENST00000441443 TRPC1P48995 793 aa19.98■□□□□ 0.79
SHOX2-203ENST00000441443 ST13P50502 369 aaKnown RBP19.98■□□□□ 0.79
SHOX2-203ENST00000441443 PHC1P78364 1004 aa19.98■□□□□ 0.79
SHOX2-203ENST00000441443 SPRYD7Q5W111 196 aa19.98■□□□□ 0.79
SHOX2-203ENST00000441443 CDYL2Q8N8U2 506 aa19.98■□□□□ 0.79
SHOX2-203ENST00000441443 THUMPD3Q9BV44 507 aaKnown RBP19.98■□□□□ 0.79
SHOX2-203ENST00000441443 MOV10Q9HCE1 1003 aaKnown RBP19.98■□□□□ 0.79
SHOX2-203ENST00000441443 CNGB3Q9NQW8 809 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms