RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 CCKBRP32239 447 aa11.56□□□□□ -0.56
HSPG2-206ENST00000439717 INHBCP55103 352 aa11.56□□□□□ -0.56
HSPG2-206ENST00000439717 MRPS25P82663 173 aaKnown RBP11.56□□□□□ -0.56
HSPG2-206ENST00000439717 CAV1Q03135 178 aa11.56□□□□□ -0.56
HSPG2-206ENST00000439717 ZFP36L1Q07352 338 aaKnown RBP11.56□□□□□ -0.56
HSPG2-206ENST00000439717 CRYMQ14894 314 aa11.56□□□□□ -0.56
HSPG2-206ENST00000439717 AMZ1Q400G9 498 aa11.56□□□□□ -0.56
HSPG2-206ENST00000439717 MAP9Q49MG5 647 aa11.56□□□□□ -0.56
HSPG2-206ENST00000439717 PTRHD1Q6GMV3 140 aaKnown RBP11.56□□□□□ -0.56
HSPG2-206ENST00000439717 C8orf74Q6P047 294 aa11.56□□□□□ -0.56
HSPG2-206ENST00000439717 MARCH9Q86YJ5 346 aa11.56□□□□□ -0.56
HSPG2-206ENST00000439717 CILP2Q8IUL8 1156 aa11.56□□□□□ -0.56
HSPG2-206ENST00000439717 ELMO1Q92556 727 aa11.56□□□□□ -0.56
HSPG2-206ENST00000439717 LPGAT1Q92604 370 aa11.56□□□□□ -0.56
HSPG2-206ENST00000439717 AHCYL2Q96HN2 611 aaKnown RBP11.56□□□□□ -0.56
HSPG2-206ENST00000439717 C12orf66Q96MD2 445 aa11.56□□□□□ -0.56
HSPG2-206ENST00000439717 PANX3Q96QZ0 392 aa11.56□□□□□ -0.56
HSPG2-206ENST00000439717 INSM2Q96T92 566 aaPredicted RBP11.56□□□□□ -0.56
HSPG2-206ENST00000439717 FAM167BQ9BTA0 163 aa11.56□□□□□ -0.56
HSPG2-206ENST00000439717 TMEM121BQ9BXQ6 578 aaPredicted RBP11.56□□□□□ -0.56
HSPG2-206ENST00000439717 STRADBQ9C0K7 418 aa11.56□□□□□ -0.56
HSPG2-206ENST00000439717 OR52A5Q9H2C5 316 aa11.56□□□□□ -0.56
HSPG2-206ENST00000439717 DPH5Q9H2P9 285 aa11.56□□□□□ -0.56
HSPG2-206ENST00000439717 EPB41L5Q9HCM4 733 aa11.56□□□□□ -0.56
HSPG2-206ENST00000439717 FAM8A1Q9UBU6 413 aa11.56□□□□□ -0.56
HSPG2-206ENST00000439717 ATXN7L1Q9ULK2 861 aaPredicted RBP11.56□□□□□ -0.56
HSPG2-206ENST00000439717 PCDHB1Q9Y5F3 818 aa11.56□□□□□ -0.56
HSPG2-206ENST00000439717 ENTPD2Q9Y5L3 495 aa11.56□□□□□ -0.56
HSPG2-206ENST00000439717 COLEC10Q9Y6Z7 277 aa11.56□□□□□ -0.56
HSPG2-206ENST00000439717 UBA6A0AVT1 1052 aaPredicted RBP11.55□□□□□ -0.56
HSPG2-206ENST00000439717 SLC5A10A0PJK1 596 aa11.55□□□□□ -0.56
HSPG2-206ENST00000439717 CTAGE15A4D2H0 777 aa11.55□□□□□ -0.56
HSPG2-206ENST00000439717 TRABD2BA6NFA1 517 aa11.55□□□□□ -0.56
HSPG2-206ENST00000439717 E7ESA3 106 aa11.55□□□□□ -0.56
HSPG2-206ENST00000439717 IFRD1O00458 451 aaPredicted RBP11.55□□□□□ -0.56
HSPG2-206ENST00000439717 KPNA5O15131 536 aa11.55□□□□□ -0.56
HSPG2-206ENST00000439717 CASC3O15234 703 aaKnown RBP11.55□□□□□ -0.56
HSPG2-206ENST00000439717 EIF3HO15372 352 aaKnown RBP eCLIP11.55□□□□□ -0.563e-7■■□□□ 12.5
HSPG2-206ENST00000439717 ESR1P03372 595 aa11.55□□□□□ -0.56
HSPG2-206ENST00000439717 CTAGE8P0CG41 777 aa11.55□□□□□ -0.56
HSPG2-206ENST00000439717 ELK3P41970 407 aa11.55□□□□□ -0.56
HSPG2-206ENST00000439717 PDX1P52945 283 aa11.55□□□□□ -0.56
HSPG2-206ENST00000439717 EIF3IQ13347 325 aaKnown RBP11.55□□□□□ -0.56
HSPG2-206ENST00000439717 GPR18Q14330 331 aa11.55□□□□□ -0.56
HSPG2-206ENST00000439717 FRG1Q14331 258 aaKnown RBP11.55□□□□□ -0.56
HSPG2-206ENST00000439717 RTP5Q14D33 572 aa11.55□□□□□ -0.56
HSPG2-206ENST00000439717 SYTL3Q4VX76 610 aa11.55□□□□□ -0.56
HSPG2-206ENST00000439717 ZNF470Q6ECI4 717 aa11.55□□□□□ -0.56
HSPG2-206ENST00000439717 WDR74Q6RFH5 385 aaPredicted RBP11.55□□□□□ -0.56
HSPG2-206ENST00000439717 USP53Q70EK8 1073 aa11.55□□□□□ -0.56
HSPG2-206ENST00000439717 CENPUQ71F23 418 aa11.55□□□□□ -0.56
HSPG2-206ENST00000439717 CTAGE6Q86UF2 777 aa11.55□□□□□ -0.56
HSPG2-206ENST00000439717 KCNMB4Q86W47 210 aa11.55□□□□□ -0.56
HSPG2-206ENST00000439717 ZNF761Q86XN6 746 aaPredicted RBP11.55□□□□□ -0.56
HSPG2-206ENST00000439717 IGDCC3Q8IVU1 814 aa11.55□□□□□ -0.56
HSPG2-206ENST00000439717 CTAGE4Q8IX94 777 aa11.55□□□□□ -0.56
HSPG2-206ENST00000439717 MMGT1Q8N4V1 131 aa11.55□□□□□ -0.56
HSPG2-206ENST00000439717 LILRA3Q8N6C8 439 aaPredicted RBP11.55□□□□□ -0.56
HSPG2-206ENST00000439717 OR4D9Q8NGE8 314 aa11.55□□□□□ -0.56
HSPG2-206ENST00000439717 ASZ1Q8WWH4 475 aa11.55□□□□□ -0.56
HSPG2-206ENST00000439717 TMEM159Q96B96 161 aa11.55□□□□□ -0.56
HSPG2-206ENST00000439717 NXPE2Q96DL1 559 aa11.55□□□□□ -0.56
HSPG2-206ENST00000439717 LIN37Q96GY3 246 aaPredicted RBP11.55□□□□□ -0.56
HSPG2-206ENST00000439717 RMDN2Q96LZ7 410 aa11.55□□□□□ -0.56
HSPG2-206ENST00000439717 PWWP2AQ96N64 755 aa11.55□□□□□ -0.56
HSPG2-206ENST00000439717 NUDT22Q9BRQ3 303 aa11.55□□□□□ -0.56
HSPG2-206ENST00000439717 TBC1D10AQ9BXI6 508 aa11.55□□□□□ -0.56
HSPG2-206ENST00000439717 IMP3Q9NV31 184 aaKnown RBP11.55□□□□□ -0.56
HSPG2-206ENST00000439717 GRHL1Q9NZI5 618 aa11.55□□□□□ -0.56
HSPG2-206ENST00000439717 ZC3H7BQ9UGR2 993 aaKnown RBP11.55□□□□□ -0.56
HSPG2-206ENST00000439717 ASXL3Q9C0F0 2248 aa11.55□□□□□ -0.56
HSPG2-206ENST00000439717 RP1P56715 2156 aa11.54□□□□□ -0.56
HSPG2-206ENST00000439717 CCDC187A0A096LP49 1063 aa11.54□□□□□ -0.56
HSPG2-206ENST00000439717 TMEM8BA6NDV4 472 aa11.54□□□□□ -0.56
HSPG2-206ENST00000439717 BANF1O75531 89 aa11.54□□□□□ -0.56
HSPG2-206ENST00000439717 UBXN7O94888 489 aa11.54□□□□□ -0.56
HSPG2-206ENST00000439717 S1PR4O95977 384 aa11.54□□□□□ -0.56
HSPG2-206ENST00000439717 APOA4P06727 396 aa11.54□□□□□ -0.56
HSPG2-206ENST00000439717 PDHA2P29803 388 aa11.54□□□□□ -0.56
HSPG2-206ENST00000439717 CCR7P32248 378 aa11.54□□□□□ -0.56
HSPG2-206ENST00000439717 PREPP48147 710 aa11.54□□□□□ -0.56
HSPG2-206ENST00000439717 LIMK2P53671 638 aa11.54□□□□□ -0.56
HSPG2-206ENST00000439717 EIF3BP55884 814 aaKnown RBP11.54□□□□□ -0.56
HSPG2-206ENST00000439717 PDIA2Q13087 525 aaKnown RBP11.54□□□□□ -0.56
HSPG2-206ENST00000439717 TRA2AQ13595 282 aaKnown RBP eCLIP11.54□□□□□ -0.56
HSPG2-206ENST00000439717 BOP1Q14137 746 aaKnown RBP11.54□□□□□ -0.56
HSPG2-206ENST00000439717 KRT33BQ14525 404 aa11.54□□□□□ -0.56
HSPG2-206ENST00000439717 TMED2Q15363 201 aa11.54□□□□□ -0.56
HSPG2-206ENST00000439717 HSP90AA5PQ58FG0 334 aa11.54□□□□□ -0.56
HSPG2-206ENST00000439717 NKAIN2Q5VXU1 208 aa11.54□□□□□ -0.56
HSPG2-206ENST00000439717 STEAP4Q687X5 459 aa11.54□□□□□ -0.56
HSPG2-206ENST00000439717 TMEM71Q6P5X7 295 aa11.54□□□□□ -0.56
HSPG2-206ENST00000439717 KLHL35Q6PF15 583 aa11.54□□□□□ -0.56
HSPG2-206ENST00000439717 UNQ6494/PRO21346Q6UXR6 183 aa11.54□□□□□ -0.56
HSPG2-206ENST00000439717 PDZD3Q86UT5 571 aa11.54□□□□□ -0.56
HSPG2-206ENST00000439717 SLITRK4Q8IW52 837 aa11.54□□□□□ -0.56
HSPG2-206ENST00000439717 CEP112Q8N8E3 955 aa11.54□□□□□ -0.56
HSPG2-206ENST00000439717 SPDYE1Q8NFV5 336 aaPredicted RBP11.54□□□□□ -0.56
HSPG2-206ENST00000439717 ART4Q93070 314 aa11.54□□□□□ -0.56
HSPG2-206ENST00000439717 CERS2Q96G23 380 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms