RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 F7P08709 466 aaPredicted RBP6.3□□□□□ -1.4
BDNF-211ENST00000439476 LPOP22079 712 aaPredicted RBP6.3□□□□□ -1.4
BDNF-211ENST00000439476 SLC7A1P30825 629 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 GRM5P41594 1212 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 ASMTP46597 345 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 ACLYP53396 1101 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 LSM3P62310 102 aaKnown RBP6.3□□□□□ -1.4
BDNF-211ENST00000439476 MFSD10Q14728 455 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 PTGES3Q15185 160 aaKnown RBP6.3□□□□□ -1.4
BDNF-211ENST00000439476 DPYSL2Q16555 572 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 HSDL1Q3SXM5 330 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 PITRM1Q5JRX3 1037 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 FGD3Q5JSP0 725 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 CXXC5Q7LFL8 322 aaKnown RBP6.3□□□□□ -1.4
BDNF-211ENST00000439476 TAS1R3Q7RTX0 852 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 CCDC36Q8IYA8 594 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 MARVELD2Q8N4S9 558 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 WDTC1Q8N5D0 677 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 PIK3C3Q8NEB9 887 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 BPIFB6Q8NFQ5 453 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 HCAR2Q8TDS4 363 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 EEF1AKMT1Q8WVE0 214 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 NCSTNQ92542 709 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 NDRG1Q92597 394 aaKnown RBP6.3□□□□□ -1.4
BDNF-211ENST00000439476 ROPN1LQ96C74 230 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 ASB9Q96DX5 294 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 SENP8Q96LD8 212 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 TM9SF2Q99805 663 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 FTHL17Q9BXU8 183 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 YTHDF1Q9BYJ9 559 aaKnown RBP6.3□□□□□ -1.4
BDNF-211ENST00000439476 USP29Q9HBJ7 922 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 EIF2B3Q9NR50 452 aaKnown RBP6.3□□□□□ -1.4
BDNF-211ENST00000439476 SACM1LQ9NTJ5 587 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 STOML2Q9UJZ1 356 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 NUDT5Q9UKK9 219 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 PSAT1Q9Y617 370 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 GOLGB1Q14789 3259 aaKnown RBP6.3□□□□□ -1.4
BDNF-211ENST00000439476 SH3PXD2BA1X283 911 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 PRKAR1AP10644 381 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 CDH5P33151 784 aaPredicted RBP6.3□□□□□ -1.4
BDNF-211ENST00000439476 PSEN2P49810 448 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 UGT2B15P54855 530 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 HUNKP57058 714 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 PHC1P78364 1004 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 MPP1Q00013 466 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 HERC3Q15034 1050 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 ZNHIT3Q15649 155 aaPredicted RBP6.3□□□□□ -1.4
BDNF-211ENST00000439476 TMEM44Q2T9K0 475 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 PAN2Q504Q3 1202 aaKnown RBP6.3□□□□□ -1.4
BDNF-211ENST00000439476 C16orf54Q6UWD8 224 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 Q6ZNX1 250 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 TFAP2DQ7Z6R9 452 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 LRRC17Q8N6Y2 441 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 JPH3Q8WXH2 748 aaPredicted RBP6.3□□□□□ -1.4
BDNF-211ENST00000439476 TSGA13Q96PP4 275 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 GBA2Q9HCG7 927 aaPredicted RBP6.3□□□□□ -1.4
BDNF-211ENST00000439476 ING3Q9NXR8 418 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 SMPD3Q9NY59 655 aaPredicted RBP6.3□□□□□ -1.4
BDNF-211ENST00000439476 IL20Q9NYY1 176 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 IKZF3Q9UKT9 509 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 SSR3Q9UNL2 185 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 STYXL1Q9Y6J8 313 aa6.3□□□□□ -1.4
BDNF-211ENST00000439476 AHDC1Q5TGY3 1603 aaPredicted RBP6.3□□□□□ -1.4
BDNF-211ENST00000439476 SERPINA1P01009 418 aa6.29□□□□□ -1.4
BDNF-211ENST00000439476 MT-ND1P03886 318 aa6.29□□□□□ -1.4
BDNF-211ENST00000439476 NMBRP28336 390 aa6.29□□□□□ -1.4
BDNF-211ENST00000439476 FAUP35544 74 aaKnown RBP6.29□□□□□ -1.4
BDNF-211ENST00000439476 YBEYP58557 167 aaPredicted RBP6.29□□□□□ -1.4
BDNF-211ENST00000439476 GMFBP60983 142 aa6.29□□□□□ -1.4
BDNF-211ENST00000439476 RPP30P78346 268 aaKnown RBP6.29□□□□□ -1.4
BDNF-211ENST00000439476 ZNF460Q14592 562 aa6.29□□□□□ -1.4
BDNF-211ENST00000439476 ALG11Q2TAA5 492 aa6.29□□□□□ -1.4
BDNF-211ENST00000439476 VPS26BQ4G0F5 336 aa6.29□□□□□ -1.4
BDNF-211ENST00000439476 HLA-DQA1Q5Y7H0 255 aa6.29□□□□□ -1.4
BDNF-211ENST00000439476 SULT1C3Q6IMI6 304 aa6.29□□□□□ -1.4
BDNF-211ENST00000439476 SPESP1Q6UW49 350 aa6.29□□□□□ -1.4
BDNF-211ENST00000439476 SCIMPQ6UWF3 145 aa6.29□□□□□ -1.4
BDNF-211ENST00000439476 RBFAQ8N0V3 343 aa6.29□□□□□ -1.4
BDNF-211ENST00000439476 LGI2Q8N0V4 545 aa6.29□□□□□ -1.4
BDNF-211ENST00000439476 PQLC3Q8N755 202 aa6.29□□□□□ -1.4
BDNF-211ENST00000439476 RASSF5Q8WWW0 418 aa6.29□□□□□ -1.4
BDNF-211ENST00000439476 CENPNQ96H22 339 aaPredicted RBP6.29□□□□□ -1.4
BDNF-211ENST00000439476 GAS2L1Q99501 681 aaPredicted RBP6.29□□□□□ -1.4
BDNF-211ENST00000439476 TBCDQ9BTW9 1192 aa6.29□□□□□ -1.4
BDNF-211ENST00000439476 EHD3Q9NZN3 535 aa6.29□□□□□ -1.4
BDNF-211ENST00000439476 COMMD9Q9P000 198 aa6.29□□□□□ -1.4
BDNF-211ENST00000439476 CYB5R1Q9UHQ9 305 aa6.29□□□□□ -1.4
BDNF-211ENST00000439476 VWA7Q9Y334 891 aa6.29□□□□□ -1.4
BDNF-211ENST00000439476 NHSL1Q5SYE7 1610 aa6.29□□□□□ -1.4
BDNF-211ENST00000439476 OR6C75A6NL08 312 aa6.29□□□□□ -1.4
BDNF-211ENST00000439476 C9JVG2 144 aa6.29□□□□□ -1.4
BDNF-211ENST00000439476 CLDN5O00501 218 aa6.29□□□□□ -1.4
BDNF-211ENST00000439476 ST8SIA5O15466 376 aa6.29□□□□□ -1.4
BDNF-211ENST00000439476 CHST10O43529 356 aa6.29□□□□□ -1.4
BDNF-211ENST00000439476 BCAS2O75934 225 aaPredicted RBP6.29□□□□□ -1.4
BDNF-211ENST00000439476 SNAPC5O75971 98 aa6.29□□□□□ -1.4
BDNF-211ENST00000439476 ALDOAP04075 364 aaKnown RBP6.29□□□□□ -1.4
BDNF-211ENST00000439476 LINC00032P0C843 101 aa6.29□□□□□ -1.4
BDNF-211ENST00000439476 ZNF12P17014 697 aa6.29□□□□□ -1.4
BDNF-211ENST00000439476 NAGAP17050 411 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms