RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 ZNF514Q96K75 400 aaPredicted RBP7.61□□□□□ -1.19
VPS50-204ENST00000438395 OLFM3Q96PB7 478 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 VPS35Q96QK1 796 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 CD180Q99467 661 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 DNAJC7Q99615 494 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 SLC40A1Q9NP59 571 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 LUC7LQ9NQ29 371 aaKnown RBP7.61□□□□□ -1.19
VPS50-204ENST00000438395 WASH6PQ9NQA3 447 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 SPTLC3Q9NUV7 552 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 IMP3Q9NV31 184 aaKnown RBP7.61□□□□□ -1.19
VPS50-204ENST00000438395 SOHLH2Q9NX45 425 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 UBP1Q9NZI7 540 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 SCHIP1Q9P0W5 487 aaPredicted RBP7.61□□□□□ -1.19
VPS50-204ENST00000438395 ZNF624Q9P2J8 865 aaPredicted RBP7.61□□□□□ -1.19
VPS50-204ENST00000438395 FAM8A1Q9UBU6 413 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 SLC23A2Q9UGH3 650 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 RARRES3Q9UL19 164 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 PADI1Q9ULC6 663 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 NENFQ9UMX5 172 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 G3BP2Q9UN86 482 aaKnown RBP7.61□□□□□ -1.19
VPS50-204ENST00000438395 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.61□□□□□ -1.19
VPS50-204ENST00000438395 SLC30A1Q9Y6M5 507 aa7.61□□□□□ -1.19
VPS50-204ENST00000438395 KLHL33A6NCF5 533 aa7.6□□□□□ -1.19
VPS50-204ENST00000438395 TLCD2A6NGC4 264 aa7.6□□□□□ -1.19
VPS50-204ENST00000438395 C2orf81A6NN90 581 aa7.6□□□□□ -1.19
VPS50-204ENST00000438395 STX7O15400 261 aaKnown RBP7.6□□□□□ -1.19
VPS50-204ENST00000438395 PSTPIP1O43586 416 aa7.6□□□□□ -1.19
VPS50-204ENST00000438395 KIF1CO43896 1103 aaKnown RBP7.6□□□□□ -1.19
VPS50-204ENST00000438395 CST8O60676 142 aa7.6□□□□□ -1.19
VPS50-204ENST00000438395 NELFEP18615 380 aaKnown RBP7.6□□□□□ -1.19
VPS50-204ENST00000438395 NFKB1P19838 968 aa7.6□□□□□ -1.19
VPS50-204ENST00000438395 HLA-DPA1P20036 260 aa7.6□□□□□ -1.19
VPS50-204ENST00000438395 PTPN3P26045 913 aa7.6□□□□□ -1.19
VPS50-204ENST00000438395 HMGCLP35914 325 aa7.6□□□□□ -1.19
VPS50-204ENST00000438395 PMS2P54278 862 aa7.6□□□□□ -1.19
VPS50-204ENST00000438395 RPS15P62841 145 aaKnown RBP7.6□□□□□ -1.19
VPS50-204ENST00000438395 TMEM115Q12893 351 aaPredicted RBP7.6□□□□□ -1.19
VPS50-204ENST00000438395 PRKAA1Q13131 559 aa7.6□□□□□ -1.19
VPS50-204ENST00000438395 DNASE1L3Q13609 305 aa7.6□□□□□ -1.19
VPS50-204ENST00000438395 PRKD1Q15139 912 aaPredicted RBP7.6□□□□□ -1.19
VPS50-204ENST00000438395 ATP13A5Q4VNC0 1218 aa7.6□□□□□ -1.19
VPS50-204ENST00000438395 FNBP1LQ5T0N5 605 aa7.6□□□□□ -1.19
VPS50-204ENST00000438395 TMTC4Q5T4D3 741 aa7.6□□□□□ -1.19
VPS50-204ENST00000438395 ITPRIPL1Q6GPH6 555 aa7.6□□□□□ -1.19
VPS50-204ENST00000438395 ASB18Q6ZVZ8 466 aa7.6□□□□□ -1.19
VPS50-204ENST00000438395 B4GALNT4Q76KP1 1039 aa7.6□□□□□ -1.19
VPS50-204ENST00000438395 OOSP2Q86WS3 158 aa7.6□□□□□ -1.19
VPS50-204ENST00000438395 TMEM126BQ8IUX1 230 aa7.6□□□□□ -1.19
VPS50-204ENST00000438395 BEND7Q8N7W2 519 aaPredicted RBP7.6□□□□□ -1.19
VPS50-204ENST00000438395 EDARADDQ8WWZ3 215 aa7.6□□□□□ -1.19
VPS50-204ENST00000438395 EID2BQ96D98 161 aa7.6□□□□□ -1.19
VPS50-204ENST00000438395 DCUN1D1Q96GG9 259 aa7.6□□□□□ -1.19
VPS50-204ENST00000438395 TEKT5Q96M29 485 aa7.6□□□□□ -1.19
VPS50-204ENST00000438395 VAT1Q99536 393 aa7.6□□□□□ -1.19
VPS50-204ENST00000438395 SPRY4Q9C004 299 aa7.6□□□□□ -1.19
VPS50-204ENST00000438395 FANCEQ9HB96 536 aa7.6□□□□□ -1.19
VPS50-204ENST00000438395 IL26Q9NPH9 171 aa7.6□□□□□ -1.19
VPS50-204ENST00000438395 OGFRQ9NZT2 677 aa7.6□□□□□ -1.19
VPS50-204ENST00000438395 EPHA6Q9UF33 1036 aa7.6□□□□□ -1.19
VPS50-204ENST00000438395 RSPH14Q9UHP6 348 aa7.6□□□□□ -1.19
VPS50-204ENST00000438395 PSMD13Q9UNM6 376 aa7.6□□□□□ -1.19
VPS50-204ENST00000438395 TP53TG5Q9Y2B4 290 aa7.6□□□□□ -1.19
VPS50-204ENST00000438395 SPO11Q9Y5K1 396 aa7.6□□□□□ -1.19
VPS50-204ENST00000438395 MRPS18BQ9Y676 258 aaKnown RBP7.6□□□□□ -1.19
VPS50-204ENST00000438395 KCNMB2Q9Y691 235 aa7.6□□□□□ -1.19
VPS50-204ENST00000438395 DNMT3AQ9Y6K1 912 aaPredicted RBP7.6□□□□□ -1.19
VPS50-204ENST00000438395 DOPEY2Q9Y3R5 2298 aa7.6□□□□□ -1.19
VPS50-204ENST00000438395 USP9XQ93008 2570 aaPredicted RBP7.6□□□□□ -1.19
VPS50-204ENST00000438395 C3orf70A6NLC5 250 aaPredicted RBP7.59□□□□□ -1.19
VPS50-204ENST00000438395 OR2AG2A6NM03 316 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 H7C0C1 242 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 MFAP3LO75121 409 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 CPNE3O75131 537 aaKnown RBP7.59□□□□□ -1.19
VPS50-204ENST00000438395 SPAG6O75602 509 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 CREG1O75629 220 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 POP7O75817 140 aaKnown RBP7.59□□□□□ -1.19
VPS50-204ENST00000438395 ANXA9O76027 345 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 PRAMEF1O95521 474 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 EPOP01588 193 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 NTRK1P04629 796 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 PTMAP06454 111 aaKnown RBP7.59□□□□□ -1.19
VPS50-204ENST00000438395 PYGMP11217 842 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 RALBP11234 206 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 MTHFD1P11586 935 aaKnown RBP7.59□□□□□ -1.19
VPS50-204ENST00000438395 FGF5P12034 268 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 BRAFP15056 766 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 ZNF28P17035 718 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 COMTP21964 271 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 CTNNA2P26232 953 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 CDKN2BP42772 138 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 ATP5OP48047 213 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 PGDP52209 483 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 MPP3Q13368 585 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 PRPSAP1Q14558 356 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 NOMO1Q15155 1222 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 LLGL1Q15334 1064 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 CHRNA6Q15825 494 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 IGFBP7Q16270 282 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 RPE65Q16518 533 aa7.59□□□□□ -1.19
VPS50-204ENST00000438395 KHDC1Q4VXA5 237 aaKnown RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms