RNA–Protein interactions for RNA: ENST00000436216.1

EXT1-202, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 3

Gene EXT1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-202ENST00000436216 GFERP55789 205 aa12.11□□□□□ -0.47
EXT1-202ENST00000436216 BASP1P80723 227 aaKnown RBP12.11□□□□□ -0.47
EXT1-202ENST00000436216 RPA4Q13156 261 aa12.11□□□□□ -0.47
EXT1-202ENST00000436216 KCNJ11Q14654 390 aa12.11□□□□□ -0.47
EXT1-202ENST00000436216 TMEM164Q5U3C3 297 aa12.11□□□□□ -0.47
EXT1-202ENST00000436216 LYPLAL1Q5VWZ2 237 aa12.11□□□□□ -0.47
EXT1-202ENST00000436216 LRRC8BQ6P9F7 803 aa12.11□□□□□ -0.47
EXT1-202ENST00000436216 AFTPHQ6ULP2 937 aa12.11□□□□□ -0.47
EXT1-202ENST00000436216 CERS6Q6ZMG9 384 aa12.11□□□□□ -0.47
EXT1-202ENST00000436216 SPDYE1Q8NFV5 336 aaPredicted RBP12.11□□□□□ -0.47
EXT1-202ENST00000436216 OR4L1Q8NH43 312 aa12.11□□□□□ -0.47
EXT1-202ENST00000436216 MAGOHBQ96A72 148 aaKnown RBP12.11□□□□□ -0.47
EXT1-202ENST00000436216 RMDN2Q96LZ7 410 aa12.11□□□□□ -0.47
EXT1-202ENST00000436216 C12orf66Q96MD2 445 aa12.11□□□□□ -0.47
EXT1-202ENST00000436216 AP1M1Q9BXS5 423 aa12.11□□□□□ -0.47
EXT1-202ENST00000436216 SPRY4Q9C004 299 aa12.11□□□□□ -0.47
EXT1-202ENST00000436216 OR52A5Q9H2C5 316 aa12.11□□□□□ -0.47
EXT1-202ENST00000436216 KIR3DX1Q9H7L2 352 aa12.11□□□□□ -0.47
EXT1-202ENST00000436216 COG4Q9H9E3 785 aa12.11□□□□□ -0.47
EXT1-202ENST00000436216 VPS37BQ9H9H4 285 aa12.11□□□□□ -0.47
EXT1-202ENST00000436216 FBXO8Q9NRD0 319 aa12.11□□□□□ -0.47
EXT1-202ENST00000436216 CHRAC1Q9NRG0 131 aa12.11□□□□□ -0.47
EXT1-202ENST00000436216 TREX1Q9NSU2 369 aa12.11□□□□□ -0.47
EXT1-202ENST00000436216 TRMT1Q9NXH9 659 aaKnown RBP12.11□□□□□ -0.47
EXT1-202ENST00000436216 SMARCAL1Q9NZC9 954 aa12.11□□□□□ -0.47
EXT1-202ENST00000436216 SNX12Q9UMY4 172 aa12.11□□□□□ -0.47
EXT1-202ENST00000436216 PRSS21Q9Y6M0 314 aa12.11□□□□□ -0.47
EXT1-202ENST00000436216 PIKFYVEQ9Y2I7 2098 aa12.1□□□□□ -0.47
EXT1-202ENST00000436216 ATMQ13315 3056 aa12.1□□□□□ -0.47
EXT1-202ENST00000436216 A8MU76 341 aa12.1□□□□□ -0.47
EXT1-202ENST00000436216 PGRMC1O00264 195 aaKnown RBP12.1□□□□□ -0.47
EXT1-202ENST00000436216 CAPN5O15484 640 aaPredicted RBP12.1□□□□□ -0.47
EXT1-202ENST00000436216 EFSO43281 561 aa12.1□□□□□ -0.47
EXT1-202ENST00000436216 POLBP06746 335 aa12.1□□□□□ -0.47
EXT1-202ENST00000436216 SLC35G4P0C7Q5 338 aa12.1□□□□□ -0.47
EXT1-202ENST00000436216 LIPCP11150 499 aa12.1□□□□□ -0.47
EXT1-202ENST00000436216 CD151P48509 253 aa12.1□□□□□ -0.47
EXT1-202ENST00000436216 TMPRSS3P57727 454 aa12.1□□□□□ -0.47
EXT1-202ENST00000436216 SESN2P58004 480 aaPredicted RBP12.1□□□□□ -0.47
EXT1-202ENST00000436216 RAB15P59190 212 aa12.1□□□□□ -0.47
EXT1-202ENST00000436216 TGIF1Q15583 401 aa12.1□□□□□ -0.47
EXT1-202ENST00000436216 SNAP47Q5SQN1 464 aa12.1□□□□□ -0.47
EXT1-202ENST00000436216 BROXQ5VW32 411 aa12.1□□□□□ -0.47
EXT1-202ENST00000436216 ARMC3Q5W041 872 aa12.1□□□□□ -0.47
EXT1-202ENST00000436216 PRSS42Q7Z5A4 293 aa12.1□□□□□ -0.47
EXT1-202ENST00000436216 PPHLN1Q8NEY8 458 aaKnown RBP12.1□□□□□ -0.47
EXT1-202ENST00000436216 KLHL6Q8WZ60 621 aa12.1□□□□□ -0.47
EXT1-202ENST00000436216 ANP32BQ92688 251 aaKnown RBP12.1□□□□□ -0.47
EXT1-202ENST00000436216 ART4Q93070 314 aa12.1□□□□□ -0.47
EXT1-202ENST00000436216 PMEPA1Q969W9 287 aa12.1□□□□□ -0.47
EXT1-202ENST00000436216 ZDHHC12Q96GR4 267 aa12.1□□□□□ -0.47
EXT1-202ENST00000436216 KIFC1Q9BW19 673 aa12.1□□□□□ -0.47
EXT1-202ENST00000436216 ASPSCR1Q9BZE9 553 aa12.1□□□□□ -0.47
EXT1-202ENST00000436216 MRM3Q9HC36 420 aaKnown RBP12.1□□□□□ -0.47
EXT1-202ENST00000436216 IMP3Q9NV31 184 aaKnown RBP12.1□□□□□ -0.47
EXT1-202ENST00000436216 SIDT1Q9NXL6 827 aaKnown RBP12.1□□□□□ -0.47
EXT1-202ENST00000436216 SLC39A1Q9NY26 324 aa12.1□□□□□ -0.47
EXT1-202ENST00000436216 BFARQ9NZS9 450 aa12.1□□□□□ -0.47
EXT1-202ENST00000436216 SLC24A2Q9UI40 661 aa12.1□□□□□ -0.47
EXT1-202ENST00000436216 HEBP2Q9Y5Z4 205 aa12.1□□□□□ -0.47
EXT1-202ENST00000436216 B3GALT1Q9Y5Z6 326 aa12.1□□□□□ -0.47
EXT1-202ENST00000436216 CFAP20Q9Y6A4 193 aaKnown RBP12.1□□□□□ -0.47
EXT1-202ENST00000436216 COLEC10Q9Y6Z7 277 aa12.1□□□□□ -0.47
EXT1-202ENST00000436216 USP27XA6NNY8 438 aa12.09□□□□□ -0.47
EXT1-202ENST00000436216 EFCAB7A8K855 629 aa12.09□□□□□ -0.47
EXT1-202ENST00000436216 OR1I1O60431 355 aa12.09□□□□□ -0.47
EXT1-202ENST00000436216 KRT14P02533 472 aa12.09□□□□□ -0.47
EXT1-202ENST00000436216 NDUFS1P28331 727 aa12.09□□□□□ -0.47
EXT1-202ENST00000436216 PDHA2P29803 388 aa12.09□□□□□ -0.47
EXT1-202ENST00000436216 LEPRP48357 1165 aaKnown RBP12.09□□□□□ -0.47
EXT1-202ENST00000436216 PPM1FP49593 454 aaPredicted RBP12.09□□□□□ -0.47
EXT1-202ENST00000436216 PRAMEP78395 509 aa12.09□□□□□ -0.47
EXT1-202ENST00000436216 CRADDP78560 199 aa12.09□□□□□ -0.47
EXT1-202ENST00000436216 GPS1Q13098 491 aa12.09□□□□□ -0.47
EXT1-202ENST00000436216 SEMA3AQ14563 771 aa12.09□□□□□ -0.47
EXT1-202ENST00000436216 TRIP13Q15645 432 aaPredicted RBP12.09□□□□□ -0.47
EXT1-202ENST00000436216 KCTD19Q17RG1 926 aaPredicted RBP12.09□□□□□ -0.47
EXT1-202ENST00000436216 DCAF12Q5T6F0 453 aa12.09□□□□□ -0.47
EXT1-202ENST00000436216 DUS1LQ6P1R4 473 aaKnown RBP12.09□□□□□ -0.47
EXT1-202ENST00000436216 KLHL35Q6PF15 583 aa12.09□□□□□ -0.47
EXT1-202ENST00000436216 CCDC137Q6PK04 289 aaKnown RBP12.09□□□□□ -0.47
EXT1-202ENST00000436216 GPR155Q7Z3F1 870 aa12.09□□□□□ -0.47
EXT1-202ENST00000436216 ZFAND4Q86XD8 727 aa12.09□□□□□ -0.47
EXT1-202ENST00000436216 MCUQ8NE86 351 aa12.09□□□□□ -0.47
EXT1-202ENST00000436216 OR6P1Q8NGX9 317 aa12.09□□□□□ -0.47
EXT1-202ENST00000436216 CPT1BQ92523 772 aa12.09□□□□□ -0.47
EXT1-202ENST00000436216 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.09□□□□□ -0.475e-6■■■■■ 34.9
EXT1-202ENST00000436216 FCRL3Q96P31 734 aaPredicted RBP12.09□□□□□ -0.47
EXT1-202ENST00000436216 TGM7Q96PF1 710 aa12.09□□□□□ -0.47
EXT1-202ENST00000436216 TEFMQ96QE5 360 aaKnown RBP12.09□□□□□ -0.47
EXT1-202ENST00000436216 CCNL2Q96S94 520 aaPredicted RBP12.09□□□□□ -0.47
EXT1-202ENST00000436216 TTC1Q99614 292 aa12.09□□□□□ -0.47
EXT1-202ENST00000436216 ZPBPQ9BS86 351 aa12.09□□□□□ -0.47
EXT1-202ENST00000436216 ZMYND15Q9H091 742 aa12.09□□□□□ -0.47
EXT1-202ENST00000436216 ZNF768Q9H5H4 540 aaKnown RBP12.09□□□□□ -0.47
EXT1-202ENST00000436216 FAM8A1Q9UBU6 413 aa12.09□□□□□ -0.47
EXT1-202ENST00000436216 IGSF10Q6WRI0 2623 aa12.08□□□□□ -0.47
EXT1-202ENST00000436216 SDK2Q58EX2 2172 aa12.08□□□□□ -0.48
EXT1-202ENST00000436216 SLC5A10A0PJK1 596 aa12.08□□□□□ -0.48
EXT1-202ENST00000436216 OR5K3A6NET4 321 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms