RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 ZNF224Q9NZL3 707 aa4.4□□□□□ -1.71
HMGB1P45-201ENST00000435986 PCDHA7Q9UN72 937 aa4.4□□□□□ -1.71
HMGB1P45-201ENST00000435986 POMT1Q9Y6A1 747 aa4.4□□□□□ -1.71
HMGB1P45-201ENST00000435986 FLT1P17948 1338 aa4.4□□□□□ -1.71
HMGB1P45-201ENST00000435986 IGLV5-52A0A0A0MRZ9 124 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 TRAV34A0A0B4J273 112 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 ELOVL7A1L3X0 281 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 OR5K3A6NET4 321 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 ANKUB1A6NFN9 424 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 CD8B2A6NJW9 211 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 PLK4O00444 970 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 CLDN4O14493 209 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 GPR137BO60478 399 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 CREG1O75629 220 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 CLDN14O95500 239 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 PENKP01210 267 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 H1F0P07305 194 aaKnown RBP4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 S1PR1P21453 382 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 MUTP22033 750 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 HOXC13P31276 330 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 GABRA5P31644 462 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 LIMK1P53667 647 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 SEC61A1P61619 476 aaKnown RBP4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 COG7P83436 770 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 ZNF234Q14588 700 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 ODF3L2Q3SX64 289 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 LEXMQ3ZCV2 418 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 PAPPA-AS1Q5QFB9 102 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 SPOUT1Q5T280 376 aaKnown RBP4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 TEX38Q6PEX7 206 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 DCLRE1AQ6PJP8 1040 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 FIGLAQ6QHK4 219 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 DNAJB7Q7Z6W7 309 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 PHLDB2Q86SQ0 1253 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 SFR1Q86XK3 245 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 IQCF1Q8N6M8 205 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 ZNF611Q8N823 705 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 SLC4A11Q8NBS3 891 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 CCDC47Q96A33 483 aaKnown RBP4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 PHF21AQ96BD5 680 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 HES6Q96HZ4 224 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 TMEM204Q9BSN7 226 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 LMF2Q9BU23 707 aaKnown RBP4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 ANKRD2Q9GZV1 360 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 SEMA6AQ9H2E6 1030 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 UBTD1Q9HAC8 227 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 XAB2Q9HCS7 855 aaKnown RBP4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 ABCF3Q9NUQ8 709 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 C1RLQ9NZP8 487 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 ODF2LQ9ULJ1 636 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 SNX7Q9UNH6 387 aa4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.39□□□□□ -1.71
HMGB1P45-201ENST00000435986 EVPLQ92817 2033 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 OR2M5A3KFT3 312 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 HTR3EA5X5Y0 456 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 TO15178 435 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 ZNHIT1O43257 154 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 XRCC3O43542 346 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 BMP15O95972 392 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 RAB40ALP0C0E4 278 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 OR2T7P0C7T2 308 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 FAM106CPP0CH98 169 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 LMO1P25800 156 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 CCKBRP32239 447 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 NPY4RP50391 375 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 RPS18P62269 152 aaKnown RBP4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 PRKCZQ05513 592 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 ZNF155Q12901 538 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 MYBPHQ13203 477 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 PPIGQ13427 754 aaKnown RBP eCLIP4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 ZNF273Q14593 569 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 VWC2Q2TAL6 325 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 RNASEH2BQ5TBB1 312 aaKnown RBP4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 KLC3Q6P597 504 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 ZNF549Q6P9A3 640 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 RHBDF2Q6PJF5 856 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 PPP1R21Q6ZMI0 780 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 DZIP1Q86YF9 867 aaKnown RBP4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 TIGD4Q8IY51 512 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 ZNF34Q8IZ26 560 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 CLIP4Q8N3C7 705 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 PGBD5Q8N414 524 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 ACVR1CQ8NER5 493 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 OR5R1Q8NH85 324 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 GDAP1Q8TB36 358 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 HMGCLL1Q8TB92 370 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 ELP5Q8TE02 316 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 AFAP1L1Q8TED9 768 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 SLC38A5Q8WUX1 472 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 SMPDL3BQ92485 455 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 SPDL1Q96EA4 605 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 PHF21BQ96EK2 531 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 ABHD8Q96I13 439 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 LRRC3BQ96PB8 259 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 SLC22A12Q96S37 553 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 CSF3RQ99062 836 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 SYT17Q9BSW7 474 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 COPS7BQ9H9Q2 264 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 MIOSQ9NXC5 875 aa4.38□□□□□ -1.71
HMGB1P45-201ENST00000435986 PCDHAC2Q9Y5I4 1007 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms