RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 C16orf46Q6P387 395 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 VSIG10LQ86VR7 867 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 CHERPQ8IWX8 916 aaKnown RBP11.07□□□□□ -0.64
SCN4A-201ENST00000435607 CCDC86Q9H6F5 360 aaKnown RBP11.07□□□□□ -0.64
SCN4A-201ENST00000435607 SP140LQ9H930 580 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 CDC42BPAQ5VT25 1732 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 B4DGG1 531 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 ADAMTS3O15072 1205 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 MMP3P08254 477 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 CYP3A4P08684 503 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 GOT1P17174 413 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 GRK5P34947 590 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 LIPEQ05469 1076 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 ENPP2Q13822 863 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 PDGFRLQ15198 375 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 ENPP7Q6UWV6 458 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 NET1Q7Z628 596 aaPredicted RBP11.06□□□□□ -0.64
SCN4A-201ENST00000435607 WDR12Q9GZL7 423 aaKnown RBP11.06□□□□□ -0.64
SCN4A-201ENST00000435607 NINJ2Q9NZG7 142 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 DDX20Q9UHI6 824 aaKnown RBP11.06□□□□□ -0.64
SCN4A-201ENST00000435607 EVLQ9UI08 416 aaPredicted RBP11.06□□□□□ -0.64
SCN4A-201ENST00000435607 CLTCQ00610 1675 aaKnown RBP11.06□□□□□ -0.64
SCN4A-201ENST00000435607 CPSF4LA6NMK7 179 aaKnown RBP11.06□□□□□ -0.64
SCN4A-201ENST00000435607 HDAC3O15379 428 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 FFAR2O15552 330 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 ELNP15502 786 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 CCR8P51685 355 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 PLET1Q6UQ28 207 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 SCIMPQ6UWF3 145 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 B3GNT6Q6ZMB0 384 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 ZNF611Q8N823 705 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 GPATCH1Q9BRR8 931 aaKnown RBP11.06□□□□□ -0.64
SCN4A-201ENST00000435607 MAFFQ9ULX9 164 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 HEMK1Q9Y5R4 338 aaPredicted RBP11.06□□□□□ -0.64
SCN4A-201ENST00000435607 NPIPA5E9PKD4 350 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 CHRNB4P30926 498 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 ACTR1BP42025 376 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 ZNF41P51814 821 aaPredicted RBP11.06□□□□□ -0.64
SCN4A-201ENST00000435607 SPIN3Q5JUX0 258 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 ZC3HC1Q86WB0 502 aaKnown RBP11.06□□□□□ -0.64
SCN4A-201ENST00000435607 KREMEN2Q8NCW0 462 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 MRM3Q9HC36 420 aaKnown RBP11.06□□□□□ -0.64
SCN4A-201ENST00000435607 C12orf4Q9NQ89 552 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 NPIPA1Q9UND3 350 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 OR2AG2A6NM03 316 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 PPEF2O14830 753 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 ADAMDEC1O15204 470 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 FARS2O95363 451 aaKnown RBP11.06□□□□□ -0.64
SCN4A-201ENST00000435607 C8AP07357 584 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 HOXB9P17482 250 aaPredicted RBP11.06□□□□□ -0.64
SCN4A-201ENST00000435607 RBMS1P29558 406 aaKnown RBP11.06□□□□□ -0.64
SCN4A-201ENST00000435607 XIAPP98170 497 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 PRKD1Q15139 912 aaPredicted RBP11.06□□□□□ -0.64
SCN4A-201ENST00000435607 PAOXQ6QHF9 649 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 GHDCQ8N2G8 530 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 NATD1Q8N6N6 113 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 ZNF709Q8N972 641 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 FAM46DQ8NEK8 389 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 SLC35G5Q96KT7 338 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 CLDN5O00501 218 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 DDX3YO15523 660 aaKnown RBP11.06□□□□□ -0.64
SCN4A-201ENST00000435607 TMEM220Q6QAJ8 160 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 OR2T12Q8NG77 320 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 CCDC107Q8WV48 283 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 ZNF184Q99676 751 aaPredicted RBP11.06□□□□□ -0.64
SCN4A-201ENST00000435607 OSBPL11Q9BXB4 747 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 CDT1Q9H211 546 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 MAGEH1Q9H213 219 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 SEMA4AQ9H3S1 761 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 CPNE3O75131 537 aaKnown RBP11.06□□□□□ -0.64
SCN4A-201ENST00000435607 ZNF3P17036 446 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 RHOQP17081 205 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 GLRA2P23416 452 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 KLRK1P26718 216 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 MAPK10P53779 464 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 TXNL4AP83876 142 aaKnown RBP11.06□□□□□ -0.64
SCN4A-201ENST00000435607 IL22RA1Q8N6P7 574 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 OR4K2Q8NGD2 314 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 KAT2AQ92830 837 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 APOLD1Q96LR9 279 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 AP1S3Q96PC3 154 aa11.06□□□□□ -0.64
SCN4A-201ENST00000435607 DHX15O43143 795 aaKnown RBP11.05□□□□□ -0.64
SCN4A-201ENST00000435607 PDYNP01213 254 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 ALPPP05187 535 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 COX4I1P13073 169 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 GADD45AP24522 165 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 GDI1P31150 447 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 RBM34P42696 430 aaKnown RBP11.05□□□□□ -0.64
SCN4A-201ENST00000435607 DUSP28Q4G0W2 176 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 GTF2IRD2BQ6EKJ0 949 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 GTF2IRD2Q86UP8 949 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 MARK4Q96L34 752 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 RBM4BQ9BQ04 359 aaKnown RBP11.05□□□□□ -0.64
SCN4A-201ENST00000435607 RBM4Q9BWF3 364 aaKnown RBP11.05□□□□□ -0.64
SCN4A-201ENST00000435607 ZNF180Q9UJW8 692 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 INSL6Q9Y581 213 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 AP4B1Q9Y6B7 739 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 LOC102724159A0A0B4J2E5 919 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 A0A1B0GVC2 190 aa11.05□□□□□ -0.64
SCN4A-201ENST00000435607 TACR2P21452 398 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms