RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 CMTR2Q8IYT2 770 aaKnown RBP18.3■□□□□ 0.52
CLK1-205ENST00000434813 PAPD5Q8NDF8 572 aaKnown RBP18.3■□□□□ 0.52
CLK1-205ENST00000434813 ACDQ96AP0 544 aa18.3■□□□□ 0.52
CLK1-205ENST00000434813 ZNF689Q96CS4 500 aaPredicted RBP18.3■□□□□ 0.52
CLK1-205ENST00000434813 C9orf16Q9BUW7 83 aa18.3■□□□□ 0.52
CLK1-205ENST00000434813 TMEM106CQ9BVX2 250 aa18.3■□□□□ 0.52
CLK1-205ENST00000434813 LRRC3Q9BY71 257 aa18.3■□□□□ 0.52
CLK1-205ENST00000434813 FAM126AQ9BYI3 521 aaPredicted RBP18.3■□□□□ 0.52
CLK1-205ENST00000434813 NSUN3Q9H649 340 aaKnown RBP18.3■□□□□ 0.52
CLK1-205ENST00000434813 NANOGQ9H9S0 305 aa18.3■□□□□ 0.52
CLK1-205ENST00000434813 IL21Q9HBE4 155 aa18.3■□□□□ 0.52
CLK1-205ENST00000434813 IL26Q9NPH9 171 aa18.3■□□□□ 0.52
CLK1-205ENST00000434813 SLAMF8Q9P0V8 285 aa18.3■□□□□ 0.52
CLK1-205ENST00000434813 TSR3Q9UJK0 312 aaKnown RBP18.3■□□□□ 0.52
CLK1-205ENST00000434813 MYRFQ9Y2G1 1151 aa18.3■□□□□ 0.52
CLK1-205ENST00000434813 H3BNH8 94 aa18.29■□□□□ 0.52
CLK1-205ENST00000434813 DLGAP1O14490 977 aa18.29■□□□□ 0.52
CLK1-205ENST00000434813 C7P10643 843 aa18.29■□□□□ 0.52
CLK1-205ENST00000434813 UMPSP11172 480 aa18.29■□□□□ 0.52
CLK1-205ENST00000434813 MSH3P20585 1137 aa18.29■□□□□ 0.52
CLK1-205ENST00000434813 DGKAP23743 735 aa18.29■□□□□ 0.52
CLK1-205ENST00000434813 ACRV1P26436 265 aa18.29■□□□□ 0.52
CLK1-205ENST00000434813 CASP2P42575 452 aa18.29■□□□□ 0.52
CLK1-205ENST00000434813 NR6A1Q15406 480 aa18.29■□□□□ 0.52
CLK1-205ENST00000434813 SPRED1Q7Z699 444 aa18.29■□□□□ 0.52
CLK1-205ENST00000434813 IFNEQ86WN2 208 aa18.29■□□□□ 0.52
CLK1-205ENST00000434813 HID1Q8IV36 788 aa18.29■□□□□ 0.52
CLK1-205ENST00000434813 TSPAN14Q8NG11 270 aa18.29■□□□□ 0.52
CLK1-205ENST00000434813 TMEM74Q96NL1 305 aa18.29■□□□□ 0.52
CLK1-205ENST00000434813 ACTL8Q9H568 366 aa18.29■□□□□ 0.52
CLK1-205ENST00000434813 IPPKQ9H8X2 491 aa18.29■□□□□ 0.52
CLK1-205ENST00000434813 ANKRD12Q6UB98 2062 aa18.29■□□□□ 0.52
CLK1-205ENST00000434813 A0A1B0GTW7 788 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 TRIM43BA6NCK2 446 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 ARNTLO00327 626 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 IFRD1O00458 451 aaPredicted RBP18.28■□□□□ 0.52
CLK1-205ENST00000434813 ANKRD28O15084 1053 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 TPST1O60507 370 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 CNPP09543 421 aaKnown RBP18.28■□□□□ 0.52
CLK1-205ENST00000434813 JAK1P23458 1154 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 ITGB8P26012 769 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 FUT11Q495W5 492 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 TXNDC8Q6A555 127 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 SLC2A7Q6PXP3 512 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 CYP20A1Q6UW02 462 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 RNF165Q6ZSG1 346 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 UBTD2Q8WUN7 234 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 BHMTQ93088 406 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 TRIM43Q96BQ3 446 aaPredicted RBP18.28■□□□□ 0.52
CLK1-205ENST00000434813 RMND5BQ96G75 393 aaPredicted RBP18.28■□□□□ 0.52
CLK1-205ENST00000434813 OLAHQ9NV23 265 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 ELOVL2Q9NXB9 296 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 ANAPC2Q9UJX6 822 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 PRSS21Q9Y6M0 314 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 GLYATL1P3A0A0U1RQE8 302 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 FAM149AA5PLN7 773 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 CARNS1A5YM72 827 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 TAPBPO15533 448 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 SLC25A14O95258 325 aaPredicted RBP18.28■□□□□ 0.52
CLK1-205ENST00000434813 URODP06132 367 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 G6PDP11413 515 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 BMP1P13497 986 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 ZNF23P17027 643 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 BPIP17213 487 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 LAG3P18627 525 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 HMOX2P30519 316 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 HNF1BP35680 557 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 HSPA7P48741 367 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 WDR5P61964 334 aaKnown RBP18.28■□□□□ 0.52
CLK1-205ENST00000434813 PLOD1Q02809 727 aaPredicted RBP18.28■□□□□ 0.52
CLK1-205ENST00000434813 TMTC4Q5T4D3 741 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 MACC1Q6ZN28 852 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 METTL3Q86U44 580 aaKnown RBP18.28■□□□□ 0.52
CLK1-205ENST00000434813 ITIH5Q86UX2 942 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 PROSER1Q86XN7 944 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 FIBCD1Q8N539 461 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 ZBTB2Q8N680 514 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 HM13Q8TCT9 377 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 NMD3Q96D46 503 aaKnown RBP18.28■□□□□ 0.52
CLK1-205ENST00000434813 ATP13A3Q9H7F0 1226 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 LSM7Q9UK45 103 aaKnown RBP18.28■□□□□ 0.52
CLK1-205ENST00000434813 CCL27Q9Y4X3 112 aa18.28■□□□□ 0.52
CLK1-205ENST00000434813 POLR3HQ9Y535 204 aaPredicted RBP18.28■□□□□ 0.52
CLK1-205ENST00000434813 PLOD2O00469 737 aa18.27■□□□□ 0.52
CLK1-205ENST00000434813 RASAL1O95294 804 aa18.27■□□□□ 0.52
CLK1-205ENST00000434813 NCK1P16333 377 aa18.27■□□□□ 0.52
CLK1-205ENST00000434813 ITGB6P18564 788 aa18.27■□□□□ 0.52
CLK1-205ENST00000434813 ABRAXAS2Q15018 415 aa18.27■□□□□ 0.52
CLK1-205ENST00000434813 AP5B1Q2VPB7 878 aa18.27■□□□□ 0.52
CLK1-205ENST00000434813 GPR33Q49SQ1 333 aa18.27■□□□□ 0.52
CLK1-205ENST00000434813 GPRC6AQ5T6X5 926 aa18.27■□□□□ 0.52
CLK1-205ENST00000434813 METTL2BQ6P1Q9 378 aaKnown RBP18.27■□□□□ 0.52
CLK1-205ENST00000434813 DLEU7Q6UYE1 221 aa18.27■□□□□ 0.52
CLK1-205ENST00000434813 MILR1Q7Z6M3 343 aa18.27■□□□□ 0.52
CLK1-205ENST00000434813 TBC1D21Q8IYX1 336 aa18.27■□□□□ 0.52
CLK1-205ENST00000434813 CPXM2Q8N436 756 aa18.27■□□□□ 0.52
CLK1-205ENST00000434813 CLDN19Q8N6F1 224 aa18.27■□□□□ 0.52
CLK1-205ENST00000434813 ZFP28Q8NHY6 868 aa18.27■□□□□ 0.52
CLK1-205ENST00000434813 PPP3R2Q96LZ3 170 aa18.27■□□□□ 0.52
CLK1-205ENST00000434813 HBEGFQ99075 208 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms