RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 SLC25A12O75746 678 aa3.15□□□□□ -1.91
PTPN4-205ENST00000433888 ACADLP28330 430 aa3.15□□□□□ -1.91
PTPN4-205ENST00000433888 HNF4AP41235 474 aa3.15□□□□□ -1.91
PTPN4-205ENST00000433888 HARS2P49590 506 aaKnown RBP3.15□□□□□ -1.91
PTPN4-205ENST00000433888 TUBP50607 506 aa3.15□□□□□ -1.91
PTPN4-205ENST00000433888 CDH11P55287 796 aa3.15□□□□□ -1.91
PTPN4-205ENST00000433888 LGALS3BPQ08380 585 aa3.15□□□□□ -1.91
PTPN4-205ENST00000433888 CSTF3Q12996 717 aaKnown RBP3.15□□□□□ -1.91
PTPN4-205ENST00000433888 UBE2V1Q13404 147 aa3.15□□□□□ -1.91
PTPN4-205ENST00000433888 FASTKD1Q53R41 847 aaKnown RBP3.15□□□□□ -1.91
PTPN4-205ENST00000433888 ZNF343Q6P1L6 599 aa3.15□□□□□ -1.91
PTPN4-205ENST00000433888 PAQR6Q6TCH4 344 aa3.15□□□□□ -1.91
PTPN4-205ENST00000433888 IL27RAQ6UWB1 636 aa3.15□□□□□ -1.91
PTPN4-205ENST00000433888 TPRG1Q6ZUI0 275 aa3.15□□□□□ -1.91
PTPN4-205ENST00000433888 CCDC190Q86UF4 302 aa3.15□□□□□ -1.91
PTPN4-205ENST00000433888 Q8N377 158 aa3.15□□□□□ -1.91
PTPN4-205ENST00000433888 TMEM178AQ8NBL3 297 aa3.15□□□□□ -1.91
PTPN4-205ENST00000433888 PRSS33Q8NF86 280 aa3.15□□□□□ -1.91
PTPN4-205ENST00000433888 OR8K5Q8NH50 307 aa3.15□□□□□ -1.91
PTPN4-205ENST00000433888 TRPC4APQ8TEL6 797 aa3.15□□□□□ -1.91
PTPN4-205ENST00000433888 HSD17B8Q92506 261 aa3.15□□□□□ -1.91
PTPN4-205ENST00000433888 SGCDQ92629 289 aa3.15□□□□□ -1.91
PTPN4-205ENST00000433888 FAM149B1Q96BN6 582 aa3.15□□□□□ -1.91
PTPN4-205ENST00000433888 SAGE1Q9NXZ1 904 aa3.15□□□□□ -1.91
PTPN4-205ENST00000433888 DGKBQ9Y6T7 804 aa3.15□□□□□ -1.91
PTPN4-205ENST00000433888 MSGN1A6NI15 193 aa3.14□□□□□ -1.91
PTPN4-205ENST00000433888 ZBTB43O43298 467 aa3.14□□□□□ -1.91
PTPN4-205ENST00000433888 HCRTR2O43614 444 aa3.14□□□□□ -1.91
PTPN4-205ENST00000433888 AGR2O95994 175 aa3.14□□□□□ -1.91
PTPN4-205ENST00000433888 RARSP54136 660 aaKnown RBP3.14□□□□□ -1.91
PTPN4-205ENST00000433888 PRKAA1Q13131 559 aa3.14□□□□□ -1.91
PTPN4-205ENST00000433888 GPR17Q13304 367 aa3.14□□□□□ -1.91
PTPN4-205ENST00000433888 CNTROBQ8N137 903 aa3.14□□□□□ -1.91
PTPN4-205ENST00000433888 MAGED4Q96JG8 741 aa3.14□□□□□ -1.91
PTPN4-205ENST00000433888 SCLT1Q96NL6 688 aa3.14□□□□□ -1.91
PTPN4-205ENST00000433888 AGXT2Q9BYV1 514 aa3.14□□□□□ -1.91
PTPN4-205ENST00000433888 PAIP1Q9H074 479 aaKnown RBP3.14□□□□□ -1.91
PTPN4-205ENST00000433888 FLRT3Q9NZU0 649 aa3.14□□□□□ -1.91
PTPN4-205ENST00000433888 SLC7A7Q9UM01 511 aa3.14□□□□□ -1.91
PTPN4-205ENST00000433888 SOS1Q07889 1333 aaPredicted RBP3.14□□□□□ -1.91
PTPN4-205ENST00000433888 A0A1W2PPR1 153 aa3.13□□□□□ -1.91
PTPN4-205ENST00000433888 TMEM8BA6NDV4 472 aa3.13□□□□□ -1.91
PTPN4-205ENST00000433888 EPM2AB3EWF7 344 aa3.13□□□□□ -1.91
PTPN4-205ENST00000433888 ATP6V0E1O15342 81 aa3.13□□□□□ -1.91
PTPN4-205ENST00000433888 CDC123O75794 336 aaPredicted RBP3.13□□□□□ -1.91
PTPN4-205ENST00000433888 CCR10P46092 362 aa3.13□□□□□ -1.91
PTPN4-205ENST00000433888 RPL7AP62424 266 aaKnown RBP3.13□□□□□ -1.91
PTPN4-205ENST00000433888 GAGE2BQ13066 116 aa3.13□□□□□ -1.91
PTPN4-205ENST00000433888 GAGE2EQ4V326 116 aa3.13□□□□□ -1.91
PTPN4-205ENST00000433888 C2CD6Q53TS8 623 aa3.13□□□□□ -1.91
PTPN4-205ENST00000433888 GAGE2AQ6NT46 116 aa3.13□□□□□ -1.91
PTPN4-205ENST00000433888 ARMC8Q8IUR7 673 aa3.13□□□□□ -1.91
PTPN4-205ENST00000433888 CPXCR1Q8N123 301 aa3.13□□□□□ -1.91
PTPN4-205ENST00000433888 TMEM116Q8NCL8 245 aa3.13□□□□□ -1.91
PTPN4-205ENST00000433888 GSDMBQ8TAX9 411 aa3.13□□□□□ -1.91
PTPN4-205ENST00000433888 PERPQ96FX8 193 aa3.13□□□□□ -1.91
PTPN4-205ENST00000433888 SLC22A12Q96S37 553 aa3.13□□□□□ -1.91
PTPN4-205ENST00000433888 TMX4Q9H1E5 349 aaPredicted RBP3.13□□□□□ -1.91
PTPN4-205ENST00000433888 P2RY12Q9H244 342 aa3.13□□□□□ -1.91
PTPN4-205ENST00000433888 DENND2DQ9H6A0 471 aaPredicted RBP3.13□□□□□ -1.91
PTPN4-205ENST00000433888 POLR1BQ9H9Y6 1135 aa3.13□□□□□ -1.91
PTPN4-205ENST00000433888 OLFML3Q9NRN5 406 aa3.13□□□□□ -1.91
PTPN4-205ENST00000433888 MIOSQ9NXC5 875 aa3.13□□□□□ -1.91
PTPN4-205ENST00000433888 TAS2R10Q9NYW0 307 aa3.13□□□□□ -1.91
PTPN4-205ENST00000433888 ERAP1Q9NZ08 941 aa3.13□□□□□ -1.91
PTPN4-205ENST00000433888 C9orf78Q9NZ63 289 aaPredicted RBP3.13□□□□□ -1.91
PTPN4-205ENST00000433888 GAGE2DQ9UEU5 116 aa3.13□□□□□ -1.91
PTPN4-205ENST00000433888 LRWD1Q9UFC0 647 aa3.13□□□□□ -1.91
PTPN4-205ENST00000433888 LIMA1Q9UHB6 759 aaKnown RBP3.13□□□□□ -1.91
PTPN4-205ENST00000433888 R3HDM2Q9Y2K5 976 aaKnown RBP3.13□□□□□ -1.91
PTPN4-205ENST00000433888 ASTN2O75129 1339 aaPredicted RBP3.13□□□□□ -1.91
PTPN4-205ENST00000433888 IPO7O95373 1038 aaKnown RBP3.12□□□□□ -1.91
PTPN4-205ENST00000433888 ZSCAN5DPP0CG00 497 aa3.12□□□□□ -1.91
PTPN4-205ENST00000433888 TRIM49P0CI25 452 aa3.12□□□□□ -1.91
PTPN4-205ENST00000433888 TRIM49CP0CI26 452 aa3.12□□□□□ -1.91
PTPN4-205ENST00000433888 UGT1A4P22310 534 aa3.12□□□□□ -1.91
PTPN4-205ENST00000433888 PBX3P40426 434 aa3.12□□□□□ -1.91
PTPN4-205ENST00000433888 MAPK9P45984 424 aa3.12□□□□□ -1.91
PTPN4-205ENST00000433888 CDR2Q01850 454 aa3.12□□□□□ -1.91
PTPN4-205ENST00000433888 BIRC3Q13489 604 aa3.12□□□□□ -1.91
PTPN4-205ENST00000433888 HNRNPDQ14103 355 aaKnown RBP3.12□□□□□ -1.91
PTPN4-205ENST00000433888 RRS1Q15050 365 aaKnown RBP3.12□□□□□ -1.91
PTPN4-205ENST00000433888 TMEM95Q3KNT9 176 aa3.12□□□□□ -1.91
PTPN4-205ENST00000433888 DCAF10Q5QP82 559 aa3.12□□□□□ -1.91
PTPN4-205ENST00000433888 KLC3Q6P597 504 aa3.12□□□□□ -1.91
PTPN4-205ENST00000433888 GPRIN3Q6ZVF9 776 aa3.12□□□□□ -1.91
PTPN4-205ENST00000433888 LRRTM1Q86UE6 522 aa3.12□□□□□ -1.91
PTPN4-205ENST00000433888 ZNF354CQ86Y25 554 aa3.12□□□□□ -1.91
PTPN4-205ENST00000433888 GALNT13Q8IUC8 556 aa3.12□□□□□ -1.91
PTPN4-205ENST00000433888 LSMEM2Q8N112 164 aa3.12□□□□□ -1.91
PTPN4-205ENST00000433888 DNAJC22Q8N4W6 341 aa3.12□□□□□ -1.91
PTPN4-205ENST00000433888 NGEFQ8N5V2 710 aa3.12□□□□□ -1.91
PTPN4-205ENST00000433888 GTF3AQ92664 365 aaKnown RBP3.12□□□□□ -1.91
PTPN4-205ENST00000433888 WDFY2Q96P53 400 aa3.12□□□□□ -1.91
PTPN4-205ENST00000433888 CLEC7AQ9BXN2 247 aa3.12□□□□□ -1.91
PTPN4-205ENST00000433888 MAF1Q9H063 256 aa3.12□□□□□ -1.91
PTPN4-205ENST00000433888 SLA2Q9H6Q3 261 aa3.12□□□□□ -1.91
PTPN4-205ENST00000433888 RRN3Q9NYV6 651 aa3.12□□□□□ -1.91
PTPN4-205ENST00000433888 EPHA6Q9UF33 1036 aa3.12□□□□□ -1.91
PTPN4-205ENST00000433888 DBNLQ9UJU6 430 aaKnown RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms