RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 TOP3BO95985 862 aaKnown RBP15.2■□□□□ 0.02
TREX1-201ENST00000433541 MT-CO3P00414 261 aa15.2■□□□□ 0.02
TREX1-201ENST00000433541 APOA4P06727 396 aa15.2■□□□□ 0.02
TREX1-201ENST00000433541 F7P08709 466 aaPredicted RBP15.2■□□□□ 0.02
TREX1-201ENST00000433541 PNLIPP16233 465 aa15.2■□□□□ 0.02
TREX1-201ENST00000433541 FASLGP48023 281 aa15.2■□□□□ 0.02
TREX1-201ENST00000433541 HSPA14Q0VDF9 509 aa15.2■□□□□ 0.02
TREX1-201ENST00000433541 FASTKD3Q14CZ7 662 aaKnown RBP15.2■□□□□ 0.02
TREX1-201ENST00000433541 TYSND1Q2T9J0 566 aa15.2■□□□□ 0.02
TREX1-201ENST00000433541 GLE1Q53GS7 698 aaKnown RBP15.2■□□□□ 0.02
TREX1-201ENST00000433541 AGAP9Q5VTM2 703 aa15.2■□□□□ 0.02
TREX1-201ENST00000433541 ABRAXAS1Q6UWZ7 409 aa15.2■□□□□ 0.02
TREX1-201ENST00000433541 WASH2PQ6VEQ5 465 aa15.2■□□□□ 0.02
TREX1-201ENST00000433541 UNC5AQ6ZN44 842 aa15.2■□□□□ 0.02
TREX1-201ENST00000433541 RBM44Q6ZP01 1051 aaKnown RBP15.2■□□□□ 0.02
TREX1-201ENST00000433541 TMPRSS12Q86WS5 348 aa15.2■□□□□ 0.02
TREX1-201ENST00000433541 DENND6AQ8IWF6 608 aa15.2■□□□□ 0.02
TREX1-201ENST00000433541 UNC5BQ8IZJ1 945 aa15.2■□□□□ 0.02
TREX1-201ENST00000433541 LILRA3Q8N6C8 439 aaPredicted RBP15.2■□□□□ 0.02
TREX1-201ENST00000433541 GPR150Q8NGU9 434 aa15.2■□□□□ 0.02
TREX1-201ENST00000433541 OR10G6Q8NH81 332 aa15.2■□□□□ 0.02
TREX1-201ENST00000433541 ART4Q93070 314 aa15.2■□□□□ 0.02
TREX1-201ENST00000433541 FAM136AQ96C01 138 aa15.2■□□□□ 0.02
TREX1-201ENST00000433541 CERS2Q96G23 380 aa15.2■□□□□ 0.02
TREX1-201ENST00000433541 LRRN3Q9H3W5 708 aa15.2■□□□□ 0.02
TREX1-201ENST00000433541 WASH6PQ9NQA3 447 aa15.2■□□□□ 0.02
TREX1-201ENST00000433541 POT1Q9NUX5 634 aa15.2■□□□□ 0.02
TREX1-201ENST00000433541 INTS10Q9NVR2 710 aaKnown RBP15.2■□□□□ 0.02
TREX1-201ENST00000433541 MTRF1LQ9UGC7 380 aaKnown RBP15.2■□□□□ 0.02
TREX1-201ENST00000433541 KLK13Q9UKR3 277 aa15.2■□□□□ 0.02
TREX1-201ENST00000433541 ANGPTL2Q9UKU9 493 aa15.2■□□□□ 0.02
TREX1-201ENST00000433541 PCDHB1Q9Y5F3 818 aa15.2■□□□□ 0.02
TREX1-201ENST00000433541 TEX264Q9Y6I9 313 aa15.2■□□□□ 0.02
TREX1-201ENST00000433541 CACNA1AO00555 2505 aa15.2■□□□□ 0.02
TREX1-201ENST00000433541 H3BMM5 538 aa15.19■□□□□ 0.02
TREX1-201ENST00000433541 EIF3HO15372 352 aaKnown RBP eCLIP15.19■□□□□ 0.02
TREX1-201ENST00000433541 DUX1O43812 170 aa15.19■□□□□ 0.02
TREX1-201ENST00000433541 RHOXF2BP0C7M4 288 aa15.19■□□□□ 0.02
TREX1-201ENST00000433541 MTHFD1P11586 935 aaKnown RBP15.19■□□□□ 0.02
TREX1-201ENST00000433541 BRAFP15056 766 aa15.19■□□□□ 0.02
TREX1-201ENST00000433541 XRCC1P18887 633 aaPredicted RBP15.19■□□□□ 0.02
TREX1-201ENST00000433541 CHRM3P20309 590 aa15.19■□□□□ 0.02
TREX1-201ENST00000433541 SLC19A1P41440 591 aa15.19■□□□□ 0.02
TREX1-201ENST00000433541 GPR3P46089 330 aa15.19■□□□□ 0.02
TREX1-201ENST00000433541 CARSP49589 748 aaKnown RBP15.19■□□□□ 0.02
TREX1-201ENST00000433541 CLCA4Q14CN2 919 aa15.19■□□□□ 0.02
TREX1-201ENST00000433541 TRADDQ15628 312 aa15.19■□□□□ 0.02
TREX1-201ENST00000433541 RPE65Q16518 533 aa15.19■□□□□ 0.02
TREX1-201ENST00000433541 DUS1LQ6P1R4 473 aaKnown RBP15.19■□□□□ 0.02
TREX1-201ENST00000433541 OTOAQ7RTW8 1153 aa15.19■□□□□ 0.02
TREX1-201ENST00000433541 C17orf82Q86X59 251 aaPredicted RBP15.19■□□□□ 0.02
TREX1-201ENST00000433541 SPDYE1Q8NFV5 336 aaPredicted RBP15.19■□□□□ 0.02
TREX1-201ENST00000433541 LPGAT1Q92604 370 aa15.19■□□□□ 0.02
TREX1-201ENST00000433541 FERD3LQ96RJ6 166 aa15.19■□□□□ 0.02
TREX1-201ENST00000433541 RHOXF2Q9BQY4 288 aa15.19■□□□□ 0.02
TREX1-201ENST00000433541 ZFATQ9P243 1243 aa15.19■□□□□ 0.02
TREX1-201ENST00000433541 ZNF624Q9P2J8 865 aaPredicted RBP15.19■□□□□ 0.02
TREX1-201ENST00000433541 TSR3Q9UJK0 312 aaKnown RBP15.19■□□□□ 0.02
TREX1-201ENST00000433541 FBXO5Q9UKT4 447 aa15.19■□□□□ 0.02
TREX1-201ENST00000433541 ATXN7L1Q9ULK2 861 aaPredicted RBP15.19■□□□□ 0.02
TREX1-201ENST00000433541 HEBP2Q9Y5Z4 205 aa15.19■□□□□ 0.02
TREX1-201ENST00000433541 AGRPO00253 132 aa15.18■□□□□ 0.02
TREX1-201ENST00000433541 KPNA5O15131 536 aa15.18■□□□□ 0.02
TREX1-201ENST00000433541 TP73O15350 636 aa15.18■□□□□ 0.02
TREX1-201ENST00000433541 CSO75390 466 aaKnown RBP15.18■□□□□ 0.02
TREX1-201ENST00000433541 TCEA3O75764 348 aa15.18■□□□□ 0.02
TREX1-201ENST00000433541 DKK1O94907 266 aa15.18■□□□□ 0.02
TREX1-201ENST00000433541 ESR1P03372 595 aa15.18■□□□□ 0.02
TREX1-201ENST00000433541 AMD1P17707 334 aa15.18■□□□□ 0.02
TREX1-201ENST00000433541 RPS3P23396 243 aaKnown RBP eCLIP15.18■□□□□ 0.02
TREX1-201ENST00000433541 DEKP35659 375 aaKnown RBP15.18■□□□□ 0.02
TREX1-201ENST00000433541 MPP1Q00013 466 aa15.18■□□□□ 0.02
TREX1-201ENST00000433541 PLOD1Q02809 727 aaPredicted RBP15.18■□□□□ 0.02
TREX1-201ENST00000433541 RPA4Q13156 261 aa15.18■□□□□ 0.02
TREX1-201ENST00000433541 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.18■□□□□ 0.02
TREX1-201ENST00000433541 PHF19Q5T6S3 580 aa15.18■□□□□ 0.02
TREX1-201ENST00000433541 NKAIN2Q5VXU1 208 aa15.18■□□□□ 0.02
TREX1-201ENST00000433541 USP53Q70EK8 1073 aa15.18■□□□□ 0.02
TREX1-201ENST00000433541 TMPRSS7Q7RTY8 843 aa15.18■□□□□ 0.02
TREX1-201ENST00000433541 PIM3Q86V86 326 aa15.18■□□□□ 0.02
TREX1-201ENST00000433541 MARCH9Q86YJ5 346 aa15.18■□□□□ 0.02
TREX1-201ENST00000433541 RBM12BQ8IXT5 1001 aaKnown RBP15.18■□□□□ 0.02
TREX1-201ENST00000433541 LKAAEAR1Q8TD35 194 aa15.18■□□□□ 0.02
TREX1-201ENST00000433541 ASZ1Q8WWH4 475 aa15.18■□□□□ 0.02
TREX1-201ENST00000433541 RMDN2Q96LZ7 410 aa15.18■□□□□ 0.02
TREX1-201ENST00000433541 INSM2Q96T92 566 aaPredicted RBP15.18■□□□□ 0.02
TREX1-201ENST00000433541 P2RY12Q9H244 342 aa15.18■□□□□ 0.02
TREX1-201ENST00000433541 RDH14Q9HBH5 336 aa15.18■□□□□ 0.02
TREX1-201ENST00000433541 COLEC10Q9Y6Z7 277 aa15.18■□□□□ 0.02
TREX1-201ENST00000433541 KNTC1P50748 2209 aa15.18■□□□□ 0.02
TREX1-201ENST00000433541 PRR19A6NJB7 356 aa15.17■□□□□ 0.02
TREX1-201ENST00000433541 D6RAR5 112 aa15.17■□□□□ 0.02
TREX1-201ENST00000433541 E7ESA3 106 aa15.17■□□□□ 0.02
TREX1-201ENST00000433541 CASC3O15234 703 aaKnown RBP15.17■□□□□ 0.02
TREX1-201ENST00000433541 ZNF500O60304 480 aaPredicted RBP15.17■□□□□ 0.02
TREX1-201ENST00000433541 NIPSNAP2O75323 286 aa15.17■□□□□ 0.02
TREX1-201ENST00000433541 PKMP14618 531 aaKnown RBP15.17■□□□□ 0.02
TREX1-201ENST00000433541 PDHA2P29803 388 aa15.17■□□□□ 0.02
TREX1-201ENST00000433541 CCR7P32248 378 aa15.17■□□□□ 0.02
TREX1-201ENST00000433541 UBE2IP63279 158 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms