RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 BIN3Q9NQY0 253 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 GSN-AS1Q9NRJ2 163 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 CACNA2D2Q9NY47 1150 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 STOML2Q9UJZ1 356 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 PADI2Q9Y2J8 665 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 NKTRP30414 1462 aaKnown RBP5.3□□□□□ -1.56
PTPN4-203ENST00000430976 BCLAF3A2AJT9 711 aaKnown RBP5.3□□□□□ -1.56
PTPN4-203ENST00000430976 H3BQ06 376 aaPredicted RBP5.3□□□□□ -1.56
PTPN4-203ENST00000430976 TRIM24O15164 1050 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 ARPC5O15511 151 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 DENRO43583 198 aaKnown RBP5.3□□□□□ -1.56
PTPN4-203ENST00000430976 CDH16O75309 829 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 COX4I1P13073 169 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 ACPPP15309 386 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 RPA2P15927 270 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 CBR1P16152 277 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 BGNP21810 368 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 DTYMKP23919 212 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 GTF2E2P29084 291 aaKnown RBP5.3□□□□□ -1.56
PTPN4-203ENST00000430976 NUDT1P36639 197 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 TALDO1P37837 337 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 RPL5P46777 297 aaKnown RBP5.3□□□□□ -1.56
PTPN4-203ENST00000430976 CCR6P51684 374 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 TAS2R60P59551 318 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 MYL7Q01449 175 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 NHLH1Q02575 133 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 SRSF5Q13243 272 aaKnown RBP5.3□□□□□ -1.56
PTPN4-203ENST00000430976 MAMLD1Q13495 774 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 TRA2AQ13595 282 aaKnown RBP eCLIP5.3□□□□□ -1.56
PTPN4-203ENST00000430976 GAS6Q14393 721 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 GANABQ14697 944 aaKnown RBP5.3□□□□□ -1.56
PTPN4-203ENST00000430976 FAM83EQ2M2I3 478 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 C15orf52Q6ZUT6 534 aaKnown RBP5.3□□□□□ -1.56
PTPN4-203ENST00000430976 PGAP1Q75T13 922 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 PLEKHH3Q7Z736 793 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 LACC1Q8IV20 430 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 STYXQ8WUJ0 223 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 GTF3AQ92664 365 aaKnown RBP5.3□□□□□ -1.56
PTPN4-203ENST00000430976 C19orf60Q96EN9 201 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 C1QTNF1Q9BXJ1 281 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 C1QTNF3Q9BXJ4 246 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 DNTTIP1Q9H147 329 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 ZNF768Q9H5H4 540 aaKnown RBP5.3□□□□□ -1.56
PTPN4-203ENST00000430976 ZNF430Q9H8G1 570 aaPredicted RBP5.3□□□□□ -1.56
PTPN4-203ENST00000430976 P4HTMQ9NXG6 502 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 DMRT1Q9Y5R6 373 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 USP47Q96K76 1375 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 CCDC88BA6NC98 1476 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 A0A1B0GVC2 190 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 M0QYV0 167 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 PRRG1O14668 218 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 SOX15O60248 233 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 LBPP18428 481 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 MMP12P39900 470 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 RPS5P46782 204 aaKnown RBP5.3□□□□□ -1.56
PTPN4-203ENST00000430976 SOX10P56693 466 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 ANTXR2P58335 489 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 NCALDP61601 193 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 TRAF2Q12933 501 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 SPCS2Q15005 226 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 DCUN1D2Q6PH85 259 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 CHST3Q7LGC8 479 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 ADAMTSL2Q86TH1 951 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 DMRTC2Q8IXT2 367 aaPredicted RBP5.3□□□□□ -1.56
PTPN4-203ENST00000430976 ZNF333Q96JL9 665 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 FEM1CQ96JP0 617 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 ZNF184Q99676 751 aaPredicted RBP5.3□□□□□ -1.56
PTPN4-203ENST00000430976 C17orf75Q9HAS0 396 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 BRF2Q9HAW0 419 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 HMG20AQ9NP66 347 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 KLHL14Q9P2G3 628 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 RAPGEFL1Q9UHV5 662 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 RBM7Q9Y580 266 aaKnown RBP5.3□□□□□ -1.56
PTPN4-203ENST00000430976 FKBP7Q9Y680 259 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 ISPDA4D126 451 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 M0R036 132 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 PEX10O60683 326 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 CRCPO75575 148 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 SNAPINO95295 136 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 WDPCPO95876 746 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 TYMPP19971 482 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 PCSK1P29120 753 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 FMO3P31513 532 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 ZNF81P51508 661 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 OR2B6P58173 313 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 ASIC1P78348 528 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 STX4Q12846 297 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 DLG1Q12959 904 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 PDK3Q15120 406 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 NTRK2Q16620 822 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 C2CD6Q53TS8 623 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 CMPK2Q5EBM0 449 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 SLC9C2Q5TAH2 1124 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 RPL13AP3Q6NVV1 102 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 METAP1DQ6UB28 335 aaPredicted RBP5.3□□□□□ -1.56
PTPN4-203ENST00000430976 FAM122BQ7Z309 247 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 CIR1Q86X95 450 aaPredicted RBP5.3□□□□□ -1.56
PTPN4-203ENST00000430976 SNX29P2Q8IUI4 249 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 CCDC105Q8IYK2 499 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 CCDC185Q8N715 623 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms