RNA–Protein interactions for RNA: ENST00000430710.7

CHD8-202, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD8, Length 7,420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-202ENST00000430710 SNIP1Q8TAD8 396 aaKnown RBP6.11□□□□□ -1.43
CHD8-202ENST00000430710 SEC14L1Q92503 715 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 ZNF717Q9BY31 904 aaPredicted RBP6.11□□□□□ -1.43
CHD8-202ENST00000430710 PDGFDQ9GZP0 370 aaPredicted RBP6.11□□□□□ -1.43
CHD8-202ENST00000430710 RANBP3Q9H6Z4 567 aaPredicted RBP6.11□□□□□ -1.43
CHD8-202ENST00000430710 TBC1D14Q9P2M4 693 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 KANSL3Q9P2N6 904 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 POLLQ9UGP5 575 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 H0YAE9 185 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 H3BNH8 94 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 RPP40O75818 363 aaKnown RBP6.11□□□□□ -1.43
CHD8-202ENST00000430710 SLITRK5O94991 958 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 ANXA8P13928 327 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 INSRRP14616 1297 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 NPR2P20594 1047 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 TLX1P31314 330 aaPredicted RBP6.11□□□□□ -1.43
CHD8-202ENST00000430710 ADCYAP1R1P41586 468 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 MANFP55145 182 aaKnown RBP6.11□□□□□ -1.43
CHD8-202ENST00000430710 DCAF12L1Q5VU92 463 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 TMEM17Q86X19 198 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 SLC37A3Q8NCC5 494 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 LSM14AQ8ND56 463 aaKnown RBP6.11□□□□□ -1.43
CHD8-202ENST00000430710 CCDC107Q8WV48 283 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 AKAP1Q92667 903 aaKnown RBP eCLIP6.11□□□□□ -1.43
CHD8-202ENST00000430710 FAM84AQ96KN4 292 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 CIPCQ9C0C6 399 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 RABL2AQ9UBK7 228 aaPredicted RBP6.11□□□□□ -1.43
CHD8-202ENST00000430710 A0A1W2PPW3 197 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 CARNS1A5YM72 827 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 PRPS2P11908 318 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 CKBP12277 381 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 IL7P13232 177 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 NRG1Q02297 640 aaPredicted RBP6.11□□□□□ -1.43
CHD8-202ENST00000430710 NOL9Q5SY16 702 aaKnown RBP6.11□□□□□ -1.43
CHD8-202ENST00000430710 FKBP1CQ5VVH2 108 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 CDCA2Q69YH5 1023 aaPredicted RBP6.11□□□□□ -1.43
CHD8-202ENST00000430710 METTL3Q86U44 580 aaKnown RBP6.11□□□□□ -1.43
CHD8-202ENST00000430710 FSTL5Q8N475 847 aaPredicted RBP6.11□□□□□ -1.43
CHD8-202ENST00000430710 NIPA2Q8N8Q9 360 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 CLP1Q92989 425 aaKnown RBP6.11□□□□□ -1.43
CHD8-202ENST00000430710 ZNF285Q96NJ3 590 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 CPXM1Q96SM3 734 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 MRPL45Q9BRJ2 306 aaKnown RBP6.11□□□□□ -1.43
CHD8-202ENST00000430710 CHIAQ9BZP6 476 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 OSGEPL1Q9H4B0 414 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 XKR8Q9H6D3 395 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 OXSMQ9NWU1 459 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 MARCH2Q9P0N8 246 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 COMMD3Q9UBI1 195 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 UXTQ9UBK9 157 aaPredicted RBP6.11□□□□□ -1.43
CHD8-202ENST00000430710 ALG5Q9Y673 324 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 SETD1AO15047 1707 aaKnown RBP6.11□□□□□ -1.43
CHD8-202ENST00000430710 NFASCO94856 1347 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 H3BRB1 525 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 PITPNM1O00562 1244 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 CLDN9O95484 217 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 SERPINA3P01011 423 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 BDNFP23560 247 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 RGS1Q08116 209 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 ZNHIT3Q15649 155 aaPredicted RBP6.11□□□□□ -1.43
CHD8-202ENST00000430710 TBRG1Q3YBR2 411 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 SETMARQ53H47 684 aaPredicted RBP6.11□□□□□ -1.43
CHD8-202ENST00000430710 GPR158Q5T848 1215 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 SLC30A10Q6XR72 485 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 CLIP4Q8N3C7 705 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 HJURPQ8NCD3 748 aaPredicted RBP6.11□□□□□ -1.43
CHD8-202ENST00000430710 GPR156Q8NFN8 814 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 OSMRQ99650 979 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 TUT1Q9H6E5 874 aaKnown RBP6.11□□□□□ -1.43
CHD8-202ENST00000430710 INTS7Q9NVH2 962 aaKnown RBP6.11□□□□□ -1.43
CHD8-202ENST00000430710 CLEC4AQ9UMR7 237 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 FAM208AQ9UK61 1670 aaKnown RBP6.11□□□□□ -1.43
CHD8-202ENST00000430710 DDTLA6NHG4 134 aaPredicted RBP6.11□□□□□ -1.43
CHD8-202ENST00000430710 PIP5K1BO14986 540 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 ARPC2O15144 300 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 PDPK1O15530 556 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 DLDP09622 509 aaKnown RBP6.11□□□□□ -1.43
CHD8-202ENST00000430710 TNNI3P19429 210 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 AQP1P29972 269 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 BEX3Q00994 111 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 RPL6Q02878 288 aaKnown RBP6.11□□□□□ -1.43
CHD8-202ENST00000430710 GRIK4Q16099 956 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 CYP4V2Q6ZWL3 525 aaPredicted RBP6.11□□□□□ -1.43
CHD8-202ENST00000430710 BEND5Q7L4P6 421 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 PIGZQ86VD9 579 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 TSSK3Q96PN8 268 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 TCF25Q9BQ70 676 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 ZSCAN5AQ9BUG6 496 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 NFKBIZQ9BYH8 718 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 TRIM2Q9C040 744 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 ABCG4Q9H172 646 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 ADAMTS10Q9H324 1103 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 LIN28AQ9H9Z2 209 aaKnown RBP6.11□□□□□ -1.43
CHD8-202ENST00000430710 IL1RAPQ9NPH3 570 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 POLR3BQ9NW08 1133 aaPredicted RBP6.11□□□□□ -1.43
CHD8-202ENST00000430710 HMGXB4Q9UGU5 601 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 UBQLN2Q9UHD9 624 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 MGAT4AQ9UM21 535 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 GLTPD2A6NH11 291 aa6.11□□□□□ -1.43
CHD8-202ENST00000430710 CDC40O60508 579 aaKnown RBP eCLIP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms