RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 CDH17Q12864 832 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 SV2CQ496J9 727 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 TRPV3Q8NET8 790 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 RXFP2Q8WXD0 754 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 EBNA1BP2Q99848 306 aaKnown RBP7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 MAGIXQ9H6Y5 334 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 KCNQ5Q9NR82 932 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 KCTD5Q9NXV2 234 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 MGAT4AQ9UM21 535 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 STRCQ7RTU9 1775 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 PIAS1O75925 651 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 KDELR1P24390 212 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 L1CAMP32004 1257 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 EN1Q05925 392 aaPredicted RBP7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 ZNF267Q14586 743 aaPredicted RBP7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 KLHL22Q53GT1 634 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 SEMA4DQ92854 862 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 GPRASP2Q96D09 838 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 SLC41A3Q96GZ6 507 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 ITPAQ9BY32 194 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 SLC19A3Q9BZV2 496 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 SLC6A16Q9GZN6 736 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 CCM2LQ9NUG4 571 aaPredicted RBP7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 MARK1Q9P0L2 795 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 CRYL1Q9Y2S2 319 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 MEMO1Q9Y316 297 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 CEPT1Q9Y6K0 416 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 TDRD15B5MCY1 1934 aaKnown RBP7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 SLIT2O94813 1529 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 TNNI3P19429 210 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 HMGCS2P54868 508 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 LRP8Q14114 963 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 TEAD4Q15561 434 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 KCNMB4Q86W47 210 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 PLD5Q8N7P1 536 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 REPS2Q8NFH8 660 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 TMEM41AQ96HV5 264 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 ZNF670Q9BS34 389 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 DSN1Q9H410 356 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 RHOJQ9H4E5 214 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 CD300AQ9UGN4 299 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 GMEB2Q9UKD1 530 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 RNF112Q9ULX5 631 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 MED16Q9Y2X0 877 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 COL11A1P12107 1806 aaPredicted RBP7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 PIGRP01833 764 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 SLC2A2P11168 524 aaPredicted RBP7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 ETV4P43268 484 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 BCAT1P54687 386 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 CDONQ4KMG0 1287 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 COL13A1Q5TAT6 717 aaPredicted RBP7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 BTBD8Q5XKL5 378 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 KAT5Q92993 513 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 KCTD12Q96CX2 325 aaKnown RBP7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 DUS3LQ96G46 650 aaKnown RBP7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 CD274Q9NZQ7 290 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 SCN5AQ14524 2016 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 CCDC85CA6NKD9 419 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 F8VP50 259 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 VPS26AO75436 327 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 HSD17B1P14061 328 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 NR0B1P51843 470 aaKnown RBP7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 PIGGQ5H8A4 983 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 UQCC3Q6UW78 93 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 FAM46DQ8NEK8 389 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 ZFAND1Q8TCF1 268 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 DOK1Q99704 481 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 ZFP57Q9NU63 452 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 ABCD2Q9UBJ2 740 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 PIN4Q9Y237 131 aaKnown RBP7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 KCPQ6ZWJ8 1503 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 BCLAF3A2AJT9 711 aaKnown RBP7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 RFPL3O75679 317 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 METTL18O95568 372 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 C6orf222P0C671 652 aaPredicted RBP7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 ZDHHC11BP0C7U3 371 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 SHMT1P34896 483 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 WDR4P57081 412 aaKnown RBP7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 CDC42EP1Q00587 391 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 MACC1Q6ZN28 852 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 ZC3H7AQ8IWR0 971 aaKnown RBP7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 OR13F1Q8NGS4 319 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 NFKBIZQ9BYH8 718 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 RPF2Q9H7B2 306 aaKnown RBP7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 CMTM6Q9NX76 183 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 RNF6Q9Y252 685 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 OAS3Q9Y6K5 1087 aaKnown RBP7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 BTAF1O14981 1849 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 SIGLEC16A6NMB1 481 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 M0QYT0 321 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 BMXP51813 675 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 GPR158Q5T848 1215 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 EID2Q8N6I1 236 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 GATAD2BQ8WXI9 593 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 ELF4Q99607 663 aaPredicted RBP7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 ZNF197O14709 1029 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 TYROBPO43914 113 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 KCNH1O95259 989 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 F9P00740 461 aa7.43□□□□□ -1.22
SYNPO2-202ENST00000429713 TFEBP19484 476 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms