RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 C17orf113A0A1B0GUU1 675 aa14.26□□□□□ -0.13
SGCE-204ENST00000428696 KLHL33A6NCF5 533 aa14.26□□□□□ -0.13
SGCE-204ENST00000428696 KIR2DS3K7RE56 304 aa14.26□□□□□ -0.13
SGCE-204ENST00000428696 AGRPO00253 132 aa14.26□□□□□ -0.13
SGCE-204ENST00000428696 IFRD1O00458 451 aaPredicted RBP14.26□□□□□ -0.13
SGCE-204ENST00000428696 PPM1DO15297 605 aa14.26□□□□□ -0.13
SGCE-204ENST00000428696 NIPSNAP2O75323 286 aa14.26□□□□□ -0.13
SGCE-204ENST00000428696 SLU7O95391 586 aaKnown RBP14.26□□□□□ -0.13
SGCE-204ENST00000428696 APOA4P06727 396 aa14.26□□□□□ -0.13
SGCE-204ENST00000428696 PKMP14618 531 aaKnown RBP14.26□□□□□ -0.13
SGCE-204ENST00000428696 BRAFP15056 766 aa14.26□□□□□ -0.13
SGCE-204ENST00000428696 SAT1P21673 171 aa14.26□□□□□ -0.13
SGCE-204ENST00000428696 CCR7P32248 378 aa14.26□□□□□ -0.13
SGCE-204ENST00000428696 E2F1Q01094 437 aa14.26□□□□□ -0.13
SGCE-204ENST00000428696 DMPKQ09013 629 aa14.26□□□□□ -0.13
SGCE-204ENST00000428696 CUL1Q13616 776 aa14.26□□□□□ -0.13
SGCE-204ENST00000428696 KIR2DS5Q14953 304 aa14.26□□□□□ -0.13
SGCE-204ENST00000428696 TMED2Q15363 201 aa14.26□□□□□ -0.13
SGCE-204ENST00000428696 KYNUQ16719 465 aa14.26□□□□□ -0.13
SGCE-204ENST00000428696 TEDDM1Q5T9Z0 273 aa14.26□□□□□ -0.13
SGCE-204ENST00000428696 STEAP4Q687X5 459 aa14.26□□□□□ -0.13
SGCE-204ENST00000428696 ABRAXAS1Q6UWZ7 409 aa14.26□□□□□ -0.13
SGCE-204ENST00000428696 CEP128Q6ZU80 1094 aa14.26□□□□□ -0.13
SGCE-204ENST00000428696 USP53Q70EK8 1073 aa14.26□□□□□ -0.13
SGCE-204ENST00000428696 OTOAQ7RTW8 1153 aa14.26□□□□□ -0.13
SGCE-204ENST00000428696 CTAGE3PQ8IX95 158 aa14.26□□□□□ -0.13
SGCE-204ENST00000428696 PHC3Q8NDX5 983 aa14.26□□□□□ -0.13
SGCE-204ENST00000428696 OR6C4Q8NGE1 309 aa14.26□□□□□ -0.13
SGCE-204ENST00000428696 MRRFQ96E11 262 aaKnown RBP14.26□□□□□ -0.13
SGCE-204ENST00000428696 AHCYL2Q96HN2 611 aaKnown RBP14.26□□□□□ -0.13
SGCE-204ENST00000428696 PANX3Q96QZ0 392 aa14.26□□□□□ -0.13
SGCE-204ENST00000428696 FERD3LQ96RJ6 166 aa14.26□□□□□ -0.13
SGCE-204ENST00000428696 NDNQ99608 321 aa14.26□□□□□ -0.13
SGCE-204ENST00000428696 TSPYL1Q9H0U9 437 aa14.26□□□□□ -0.13
SGCE-204ENST00000428696 P2RY12Q9H244 342 aa14.26□□□□□ -0.13
SGCE-204ENST00000428696 COG4Q9H9E3 785 aa14.26□□□□□ -0.13
SGCE-204ENST00000428696 PLAC1Q9HBJ0 212 aa14.26□□□□□ -0.13
SGCE-204ENST00000428696 TOR4AQ9NXH8 423 aa14.26□□□□□ -0.13
SGCE-204ENST00000428696 ZNF624Q9P2J8 865 aaPredicted RBP14.26□□□□□ -0.13
SGCE-204ENST00000428696 TXNDC16Q9P2K2 825 aa14.26□□□□□ -0.13
SGCE-204ENST00000428696 RABGEF1Q9UJ41 708 aa14.26□□□□□ -0.13
SGCE-204ENST00000428696 H3BMM5 538 aa14.25□□□□□ -0.13
SGCE-204ENST00000428696 CASC3O15234 703 aaKnown RBP14.25□□□□□ -0.13
SGCE-204ENST00000428696 ZW10O43264 779 aa14.25□□□□□ -0.13
SGCE-204ENST00000428696 NUDT21O43809 227 aaKnown RBP14.25□□□□□ -0.13
SGCE-204ENST00000428696 AHSGP02765 367 aa14.25□□□□□ -0.13
SGCE-204ENST00000428696 ESR1P03372 595 aa14.25□□□□□ -0.13
SGCE-204ENST00000428696 RPLP0P05388 317 aaKnown RBP14.25□□□□□ -0.13
SGCE-204ENST00000428696 SLC19A1P41440 591 aa14.25□□□□□ -0.13
SGCE-204ENST00000428696 CCL7P80098 99 aa14.25□□□□□ -0.13
SGCE-204ENST00000428696 ABRQ12979 859 aa14.25□□□□□ -0.13
SGCE-204ENST00000428696 RPE65Q16518 533 aa14.25□□□□□ -0.13
SGCE-204ENST00000428696 CTSL3PQ5NE16 218 aa14.25□□□□□ -0.13
SGCE-204ENST00000428696 AGAP9Q5VTM2 703 aa14.25□□□□□ -0.13
SGCE-204ENST00000428696 STRA8Q7Z7C7 330 aa14.25□□□□□ -0.13
SGCE-204ENST00000428696 C2CD4AQ8NCU7 369 aaPredicted RBP14.25□□□□□ -0.13
SGCE-204ENST00000428696 LKAAEAR1Q8TD35 194 aa14.25□□□□□ -0.13
SGCE-204ENST00000428696 JPH3Q8WXH2 748 aaPredicted RBP14.25□□□□□ -0.13
SGCE-204ENST00000428696 CDKL2Q92772 493 aa14.25□□□□□ -0.13
SGCE-204ENST00000428696 BIRC8Q96P09 236 aa14.25□□□□□ -0.13
SGCE-204ENST00000428696 INSM2Q96T92 566 aaPredicted RBP14.25□□□□□ -0.13
SGCE-204ENST00000428696 KCNK4Q9NYG8 393 aa14.25□□□□□ -0.13
SGCE-204ENST00000428696 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.25□□□□□ -0.13
SGCE-204ENST00000428696 V9GYY5 206 aaPredicted RBP14.25□□□□□ -0.13
SGCE-204ENST00000428696 GOLGA4Q13439 2230 aaKnown RBP14.25□□□□□ -0.13
SGCE-204ENST00000428696 LRP4O75096 1905 aa14.25□□□□□ -0.13
SGCE-204ENST00000428696 A6NCN8 305 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 LIN7AO14910 233 aaPredicted RBP14.24□□□□□ -0.13
SGCE-204ENST00000428696 OPA1O60313 960 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 GSTM1P09488 218 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 JUPP14923 745 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 GSTM4Q03013 218 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 PRKG2Q13237 762 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 ILKQ13418 452 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 NKAIN2Q5VXU1 208 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 DUS1LQ6P1R4 473 aaKnown RBP14.24□□□□□ -0.13
SGCE-204ENST00000428696 GPATCH11Q8N954 259 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 UHMK1Q8TAS1 419 aaKnown RBP14.24□□□□□ -0.13
SGCE-204ENST00000428696 FBF1Q8TES7 1133 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 ASZ1Q8WWH4 475 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 SH3KBP1Q96B97 665 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 FAM129AQ9BZQ8 928 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 LRRC4CQ9HCJ2 640 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 GALPQ9UBC7 116 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 ARID1BQ8NFD5 2236 aaPredicted RBP14.24□□□□□ -0.13
SGCE-204ENST00000428696 PLXNB3Q9ULL4 1909 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 PCNX2A6NKB5 2137 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 ZNF106Q9H2Y7 1883 aaKnown RBP14.24□□□□□ -0.13
SGCE-204ENST00000428696 FAM149AA5PLN7 773 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 KPNA5O15131 536 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 HYAL3O43820 417 aaPredicted RBP14.24□□□□□ -0.13
SGCE-204ENST00000428696 ACSL3O95573 720 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 MTHFD1P11586 935 aaKnown RBP14.24□□□□□ -0.13
SGCE-204ENST00000428696 TYRP1P17643 537 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 AMD1P17707 334 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 XRCC1P18887 633 aaPredicted RBP14.24□□□□□ -0.13
SGCE-204ENST00000428696 SPINK2P20155 84 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 RPS3P23396 243 aaKnown RBP eCLIP14.24□□□□□ -0.13
SGCE-204ENST00000428696 AOAHP28039 575 aa14.24□□□□□ -0.13
SGCE-204ENST00000428696 LEPRP48357 1165 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms