RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 SERPINA9Q86WD7 417 aa17.97■□□□□ 0.47
PSPC1-202ENST00000427943 RASGRP3Q8IV61 690 aa17.97■□□□□ 0.47
PSPC1-202ENST00000427943 OR52K1Q8NGK4 314 aa17.97■□□□□ 0.47
PSPC1-202ENST00000427943 HM13Q8TCT9 377 aa17.97■□□□□ 0.47
PSPC1-202ENST00000427943 KLHL6Q8WZ60 621 aa17.97■□□□□ 0.47
PSPC1-202ENST00000427943 KIAA1143Q96AT1 154 aaPredicted RBP17.97■□□□□ 0.47
PSPC1-202ENST00000427943 C19orf43Q9BQ61 176 aa17.97■□□□□ 0.47
PSPC1-202ENST00000427943 RAB33BQ9H082 229 aa17.97■□□□□ 0.47
PSPC1-202ENST00000427943 ZDHHC3Q9NYG2 299 aa17.97■□□□□ 0.47
PSPC1-202ENST00000427943 ACSL5Q9ULC5 683 aa17.97■□□□□ 0.47
PSPC1-202ENST00000427943 IGHV5-51A0A0C4DH38 117 aa17.96■□□□□ 0.47
PSPC1-202ENST00000427943 TRBV5-4A0A0C4DH59 114 aa17.96■□□□□ 0.47
PSPC1-202ENST00000427943 KLHL33A6NCF5 533 aa17.96■□□□□ 0.47
PSPC1-202ENST00000427943 ZNF891A8MT65 544 aaPredicted RBP17.96■□□□□ 0.47
PSPC1-202ENST00000427943 H7C0S8 307 aa17.96■□□□□ 0.47
PSPC1-202ENST00000427943 PSMD3O43242 534 aa17.96■□□□□ 0.47
PSPC1-202ENST00000427943 IFNB1P01574 187 aa17.96■□□□□ 0.47
PSPC1-202ENST00000427943 ARCN1P48444 511 aaKnown RBP17.96■□□□□ 0.47
PSPC1-202ENST00000427943 GSDMDP57764 484 aa17.96■□□□□ 0.47
PSPC1-202ENST00000427943 ABHD18Q0P651 414 aa17.96■□□□□ 0.47
PSPC1-202ENST00000427943 KCNAB1Q14722 419 aa17.96■□□□□ 0.47
PSPC1-202ENST00000427943 OASLQ15646 514 aaKnown RBP17.96■□□□□ 0.47
PSPC1-202ENST00000427943 GPR33Q49SQ1 333 aa17.96■□□□□ 0.47
PSPC1-202ENST00000427943 CCDC38Q502W7 563 aa17.96■□□□□ 0.47
PSPC1-202ENST00000427943 DNTTIP2Q5QJE6 756 aaKnown RBP17.96■□□□□ 0.47
PSPC1-202ENST00000427943 KLHL35Q6PF15 583 aa17.96■□□□□ 0.47
PSPC1-202ENST00000427943 PRUNE1Q86TP1 453 aa17.96■□□□□ 0.47
PSPC1-202ENST00000427943 OOSP2Q86WS3 158 aa17.96■□□□□ 0.47
PSPC1-202ENST00000427943 PIANPQ8IYJ0 282 aa17.96■□□□□ 0.47
PSPC1-202ENST00000427943 STYXQ8WUJ0 223 aa17.96■□□□□ 0.47
PSPC1-202ENST00000427943 C1orf54Q8WWF1 131 aa17.96■□□□□ 0.47
PSPC1-202ENST00000427943 CDKN2AIPNLQ96HQ2 116 aa17.96■□□□□ 0.47
PSPC1-202ENST00000427943 MAP3K3Q99759 626 aa17.96■□□□□ 0.47
PSPC1-202ENST00000427943 KIR3DX1Q9H7L2 352 aa17.96■□□□□ 0.47
PSPC1-202ENST00000427943 IL17BQ9UHF5 180 aa17.96■□□□□ 0.47
PSPC1-202ENST00000427943 SLC24A2Q9UI40 661 aa17.96■□□□□ 0.47
PSPC1-202ENST00000427943 IGLV3-16A0A075B6K0 115 aa17.95■□□□□ 0.46
PSPC1-202ENST00000427943 OR5K3A6NET4 321 aa17.95■□□□□ 0.46
PSPC1-202ENST00000427943 OR51F1A6NGY5 319 aa17.95■□□□□ 0.46
PSPC1-202ENST00000427943 KIAA0754O94854 1291 aa17.95■□□□□ 0.46
PSPC1-202ENST00000427943 PRKAR1AP10644 381 aa17.95■□□□□ 0.46
PSPC1-202ENST00000427943 NELFEP18615 380 aaKnown RBP17.95■□□□□ 0.46
PSPC1-202ENST00000427943 STAT5AP42229 794 aa17.95■□□□□ 0.46
PSPC1-202ENST00000427943 NFATC3Q12968 1075 aa17.95■□□□□ 0.46
PSPC1-202ENST00000427943 SNX1Q13596 522 aa17.95■□□□□ 0.46
PSPC1-202ENST00000427943 KRT33BQ14525 404 aa17.95■□□□□ 0.46
PSPC1-202ENST00000427943 DBN1Q16643 649 aa17.95■□□□□ 0.46
PSPC1-202ENST00000427943 CAPRIN2Q6IMN6 1127 aaKnown RBP17.95■□□□□ 0.46
PSPC1-202ENST00000427943 CERS6Q6ZMG9 384 aa17.95■□□□□ 0.46
PSPC1-202ENST00000427943 SLC13A5Q86YT5 568 aaPredicted RBP17.95■□□□□ 0.46
PSPC1-202ENST00000427943 CLDN19Q8N6F1 224 aa17.95■□□□□ 0.46
PSPC1-202ENST00000427943 DNAAF3Q8N9W5 541 aa17.95■□□□□ 0.46
PSPC1-202ENST00000427943 SIDT2Q8NBJ9 832 aaKnown RBP17.95■□□□□ 0.46
PSPC1-202ENST00000427943 GALNT6Q8NCL4 622 aa17.95■□□□□ 0.46
PSPC1-202ENST00000427943 HEXDCQ8WVB3 486 aa17.95■□□□□ 0.46
PSPC1-202ENST00000427943 UBXN4Q92575 508 aa17.95■□□□□ 0.46
PSPC1-202ENST00000427943 SLC45A3Q96JT2 553 aa17.95■□□□□ 0.46
PSPC1-202ENST00000427943 TRIT1Q9H3H1 467 aaKnown RBP17.95■□□□□ 0.46
PSPC1-202ENST00000427943 COG4Q9H9E3 785 aa17.95■□□□□ 0.46
PSPC1-202ENST00000427943 ETNK1Q9HBU6 452 aa17.95■□□□□ 0.46
PSPC1-202ENST00000427943 HRASLS2Q9NWW9 162 aa17.95■□□□□ 0.46
PSPC1-202ENST00000427943 LNPEPQ9UIQ6 1025 aa17.95■□□□□ 0.46
PSPC1-202ENST00000427943 ZNF148Q9UQR1 794 aa17.95■□□□□ 0.46
PSPC1-202ENST00000427943 OR6C74A6NCV1 312 aa17.94■□□□□ 0.46
PSPC1-202ENST00000427943 TLCD2A6NGC4 264 aa17.94■□□□□ 0.46
PSPC1-202ENST00000427943 B8ZZF3 427 aa17.94■□□□□ 0.46
PSPC1-202ENST00000427943 NKX2-8O15522 239 aa17.94■□□□□ 0.46
PSPC1-202ENST00000427943 TIAF1O95411 115 aa17.94■□□□□ 0.46
PSPC1-202ENST00000427943 EBLN1P0CF75 366 aa17.94■□□□□ 0.46
PSPC1-202ENST00000427943 ETS1P14921 441 aa17.94■□□□□ 0.46
PSPC1-202ENST00000427943 FOLR1P15328 257 aa17.94■□□□□ 0.46
PSPC1-202ENST00000427943 CACNG1Q06432 222 aa17.94■□□□□ 0.46
PSPC1-202ENST00000427943 TUBB3Q13509 450 aa17.94■□□□□ 0.46
PSPC1-202ENST00000427943 IL11RAQ14626 422 aa17.94■□□□□ 0.46
PSPC1-202ENST00000427943 MEI1Q5TIA1 1274 aa17.94■□□□□ 0.46
PSPC1-202ENST00000427943 LINC00523Q86TU6 105 aa17.94■□□□□ 0.46
PSPC1-202ENST00000427943 PPP1R3BQ86XI6 285 aa17.94■□□□□ 0.46
PSPC1-202ENST00000427943 ESX1Q8N693 406 aa17.94■□□□□ 0.46
PSPC1-202ENST00000427943 SLC41A2Q96JW4 573 aa17.94■□□□□ 0.46
PSPC1-202ENST00000427943 ALS2CR12Q96Q35 445 aa17.94■□□□□ 0.46
PSPC1-202ENST00000427943 CCM2Q9BSQ5 444 aa17.94■□□□□ 0.46
PSPC1-202ENST00000427943 LZTFL1Q9NQ48 299 aa17.94■□□□□ 0.46
PSPC1-202ENST00000427943 MRPS18BQ9Y676 258 aaKnown RBP17.94■□□□□ 0.46
PSPC1-202ENST00000427943 RPS6KL1Q9Y6S9 549 aa17.94■□□□□ 0.46
PSPC1-202ENST00000427943 UBA6A0AVT1 1052 aaPredicted RBP17.93■□□□□ 0.46
PSPC1-202ENST00000427943 MROH6A6NGR9 719 aa17.93■□□□□ 0.46
PSPC1-202ENST00000427943 E7EVH7 732 aa17.93■□□□□ 0.46
PSPC1-202ENST00000427943 ARHGAP6O43182 974 aa17.93■□□□□ 0.46
PSPC1-202ENST00000427943 SPAG6O75602 509 aa17.93■□□□□ 0.46
PSPC1-202ENST00000427943 FGF5P12034 268 aa17.93■□□□□ 0.46
PSPC1-202ENST00000427943 MSNP26038 577 aaKnown RBP17.93■□□□□ 0.46
PSPC1-202ENST00000427943 PDHA2P29803 388 aa17.93■□□□□ 0.46
PSPC1-202ENST00000427943 STIP1P31948 543 aaKnown RBP17.93■□□□□ 0.46
PSPC1-202ENST00000427943 GRIA1P42261 906 aa17.93■□□□□ 0.46
PSPC1-202ENST00000427943 PREPP48147 710 aa17.93■□□□□ 0.46
PSPC1-202ENST00000427943 LMAN1P49257 510 aa17.93■□□□□ 0.46
PSPC1-202ENST00000427943 NFKB2Q00653 900 aa17.93■□□□□ 0.46
PSPC1-202ENST00000427943 CDC20Q12834 499 aa17.93■□□□□ 0.46
PSPC1-202ENST00000427943 CDH17Q12864 832 aa17.93■□□□□ 0.46
PSPC1-202ENST00000427943 MAP7Q14244 749 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms