RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 ACAD10Q6JQN1 1059 aa5.61□□□□□ -1.51
C9orf3-205ENST00000427193 CES5AQ6NT32 575 aa5.61□□□□□ -1.51
C9orf3-205ENST00000427193 DENND1BQ6P3S1 775 aa5.61□□□□□ -1.51
C9orf3-205ENST00000427193 ALKBH5Q6P6C2 394 aaKnown RBP5.61□□□□□ -1.51
C9orf3-205ENST00000427193 DSTYKQ6XUX3 929 aa5.61□□□□□ -1.51
C9orf3-205ENST00000427193 CLEC20AQ6ZU45 233 aa5.61□□□□□ -1.51
C9orf3-205ENST00000427193 ARCQ7LC44 396 aa5.61□□□□□ -1.51
C9orf3-205ENST00000427193 BNIPLQ7Z465 357 aa5.61□□□□□ -1.51
C9orf3-205ENST00000427193 MRPL43Q8N983 215 aaKnown RBP5.61□□□□□ -1.51
C9orf3-205ENST00000427193 TDRD5Q8NAT2 981 aaKnown RBP5.61□□□□□ -1.51
C9orf3-205ENST00000427193 ZNF461Q8TAF7 563 aa5.61□□□□□ -1.51
C9orf3-205ENST00000427193 SLC2A14Q8TDB8 520 aa5.61□□□□□ -1.51
C9orf3-205ENST00000427193 IPCEF1Q8WWN9 437 aaPredicted RBP5.61□□□□□ -1.51
C9orf3-205ENST00000427193 MCRS1Q96EZ8 462 aa5.61□□□□□ -1.51
C9orf3-205ENST00000427193 HSFY1Q96LI6 401 aa5.61□□□□□ -1.51
C9orf3-205ENST00000427193 CEP295NLQ96MC4 621 aa5.61□□□□□ -1.51
C9orf3-205ENST00000427193 CPXM1Q96SM3 734 aa5.61□□□□□ -1.51
C9orf3-205ENST00000427193 APOL5Q9BWW9 433 aa5.61□□□□□ -1.51
C9orf3-205ENST00000427193 DUSP16Q9BY84 665 aa5.61□□□□□ -1.51
C9orf3-205ENST00000427193 ARL8BQ9NVJ2 186 aa5.61□□□□□ -1.51
C9orf3-205ENST00000427193 VPS51Q9UID3 782 aa5.61□□□□□ -1.51
C9orf3-205ENST00000427193 GTF3C4Q9UKN8 822 aa5.61□□□□□ -1.51
C9orf3-205ENST00000427193 TSPAN16Q9UKR8 245 aa5.61□□□□□ -1.51
C9orf3-205ENST00000427193 DUSP12Q9UNI6 340 aa5.61□□□□□ -1.51
C9orf3-205ENST00000427193 SLC27A6Q9Y2P4 619 aa5.61□□□□□ -1.51
C9orf3-205ENST00000427193 IGLV5-39A0A0G2JS06 123 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 MTMR11A4FU01 709 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 ANKRD62A6NC57 917 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 C2CD4BA6NLJ0 364 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 USP27XA6NNY8 438 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 HIDE1A8MVS5 230 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 XPO1O14980 1071 aaKnown RBP5.6□□□□□ -1.51
C9orf3-205ENST00000427193 TEX28O15482 410 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 PAPSS1O43252 624 aaPredicted RBP5.6□□□□□ -1.51
C9orf3-205ENST00000427193 PRAMEF2O60811 474 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 LRP3O75074 770 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 RTN2O75298 545 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 CYP1A2P05177 515 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 CNPP09543 421 aaKnown RBP5.6□□□□□ -1.51
C9orf3-205ENST00000427193 CCDC130P13994 396 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 BTF3P20290 206 aaKnown RBP5.6□□□□□ -1.51
C9orf3-205ENST00000427193 NTSR1P30989 418 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 MTHFRP42898 656 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 GLUD2P49448 558 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 COPAP53621 1224 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 GALCP54803 685 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 PDCLQ13371 301 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 EIF4EBP2Q13542 120 aaPredicted RBP5.6□□□□□ -1.51
C9orf3-205ENST00000427193 TDGQ13569 410 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 MAPRE1Q15691 268 aaKnown RBP5.6□□□□□ -1.51
C9orf3-205ENST00000427193 PSMD5Q16401 504 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 NFE2Q16621 373 aaPredicted RBP5.6□□□□□ -1.51
C9orf3-205ENST00000427193 TPGS2Q68CL5 300 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 PLAG1Q6DJT9 500 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 PM20D1Q6GTS8 502 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 ZNF280DQ6N043 979 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 PPP1R2P3Q6NXS1 205 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 PMF1Q6P1K2 205 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 PRSS55Q6UWB4 352 aaPredicted RBP5.6□□□□□ -1.51
C9orf3-205ENST00000427193 CLEC9AQ6UXN8 241 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 RTL10Q7L3V2 364 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 BEND5Q7L4P6 421 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 SLFN11Q7Z7L1 901 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 TCEAL8Q8IYN2 117 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 MCOLN2Q8IZK6 566 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 CCAR2Q8N163 923 aaKnown RBP5.6□□□□□ -1.51
C9orf3-205ENST00000427193 VPS52Q8N1B4 723 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 PELI3Q8N2H9 469 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.6□□□□□ -1.51
C9orf3-205ENST00000427193 LRRC57Q8N9N7 239 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 C2orf15Q8WU43 125 aaKnown RBP5.6□□□□□ -1.51
C9orf3-205ENST00000427193 NT5C3BQ969T7 300 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 MYLPFQ96A32 169 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 THOC3Q96J01 351 aaKnown RBP5.6□□□□□ -1.51
C9orf3-205ENST00000427193 SPATA17Q96L03 361 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 C8orf48Q96LL4 319 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 CCDC42Q96M95 316 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 DESI2Q9BSY9 194 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 TM2D2Q9BX73 214 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 SNX25Q9H3E2 840 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 FAM204AQ9H8W3 233 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.6□□□□□ -1.51
C9orf3-205ENST00000427193 ZNHIT6Q9NWK9 470 aaKnown RBP5.6□□□□□ -1.51
C9orf3-205ENST00000427193 WNT16Q9UBV4 365 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 PPP2R2CQ9Y2T4 447 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 KALRNO60229 2985 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 KIAA1671Q9BY89 1806 aa5.6□□□□□ -1.51
C9orf3-205ENST00000427193 ZNF462Q96JM2 2506 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 PTPRDP23468 1912 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 CLDN5O00501 218 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 RRHO14718 337 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 THAP12O43422 761 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 MED7O43513 233 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 SEC24AO95486 1093 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 FYNP06241 537 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 DCNP07585 359 aaKnown RBP5.59□□□□□ -1.51
C9orf3-205ENST00000427193 OR4Q2P0C623 313 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 ZDHHC11BP0C7U3 371 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 TMEM225BP0DP42 221 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 MYBL1P10243 752 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms