RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 CD63P08962 238 aa13.79□□□□□ -0.2
HDAC6-206ENST00000426196 MSL3P1P0C860 447 aa13.79□□□□□ -0.2
HDAC6-206ENST00000426196 MTHFD1P11586 935 aaKnown RBP13.79□□□□□ -0.2
HDAC6-206ENST00000426196 PCK1P35558 622 aa13.79□□□□□ -0.2
HDAC6-206ENST00000426196 PREPP48147 710 aa13.79□□□□□ -0.2
HDAC6-206ENST00000426196 ARCN1P48444 511 aaKnown RBP13.79□□□□□ -0.2
HDAC6-206ENST00000426196 DMPKQ09013 629 aa13.79□□□□□ -0.2
HDAC6-206ENST00000426196 NIPAL4Q0D2K0 466 aa13.79□□□□□ -0.2
HDAC6-206ENST00000426196 PRKAA1Q13131 559 aa13.79□□□□□ -0.2
HDAC6-206ENST00000426196 XRCC4Q13426 336 aa13.79□□□□□ -0.2
HDAC6-206ENST00000426196 ZNF169Q14929 603 aaPredicted RBP13.79□□□□□ -0.2
HDAC6-206ENST00000426196 ZNF630Q2M218 657 aaPredicted RBP13.79□□□□□ -0.2
HDAC6-206ENST00000426196 BOLA3Q53S33 107 aa13.79□□□□□ -0.2
HDAC6-206ENST00000426196 ZNF789Q5FWF6 425 aa13.79□□□□□ -0.2
HDAC6-206ENST00000426196 MLIPQ5VWP3 458 aa13.79□□□□□ -0.2
HDAC6-206ENST00000426196 FBXO38Q6PIJ6 1188 aa13.79□□□□□ -0.2
HDAC6-206ENST00000426196 B4GALNT4Q76KP1 1039 aa13.79□□□□□ -0.2
HDAC6-206ENST00000426196 ARRDC2Q8TBH0 407 aa13.79□□□□□ -0.2
HDAC6-206ENST00000426196 DNAJB14Q8TBM8 379 aa13.79□□□□□ -0.2
HDAC6-206ENST00000426196 EID2BQ96D98 161 aa13.79□□□□□ -0.2
HDAC6-206ENST00000426196 CNDP1Q96KN2 507 aa13.79□□□□□ -0.2
HDAC6-206ENST00000426196 SLX1AQ9BQ83 275 aa13.79□□□□□ -0.2
HDAC6-206ENST00000426196 TRIM8Q9BZR9 551 aa13.79□□□□□ -0.2
HDAC6-206ENST00000426196 TRIM7Q9C029 511 aa13.79□□□□□ -0.2
HDAC6-206ENST00000426196 C1GALT1Q9NS00 363 aa13.79□□□□□ -0.2
HDAC6-206ENST00000426196 SAMSN1Q9NSI8 373 aaKnown RBP13.79□□□□□ -0.2
HDAC6-206ENST00000426196 TAS2R14Q9NYV8 317 aa13.79□□□□□ -0.2
HDAC6-206ENST00000426196 SHOC2Q9UQ13 582 aa13.79□□□□□ -0.2
HDAC6-206ENST00000426196 TMCO5BA8MYB1 307 aa13.78□□□□□ -0.2
HDAC6-206ENST00000426196 JRKO75564 520 aa13.78□□□□□ -0.2
HDAC6-206ENST00000426196 IL1R2P27930 398 aa13.78□□□□□ -0.2
HDAC6-206ENST00000426196 SSTR2P30874 369 aa13.78□□□□□ -0.2
HDAC6-206ENST00000426196 TMEM115Q12893 351 aaPredicted RBP13.78□□□□□ -0.2
HDAC6-206ENST00000426196 AIMP2Q13155 320 aaKnown RBP13.78□□□□□ -0.2
HDAC6-206ENST00000426196 GALNT3Q14435 633 aa13.78□□□□□ -0.2
HDAC6-206ENST00000426196 IRAK1BP1Q5VVH5 260 aa13.78□□□□□ -0.2
HDAC6-206ENST00000426196 ZNF808Q8N4W9 903 aaPredicted RBP13.78□□□□□ -0.2
HDAC6-206ENST00000426196 BCORP1Q8N888 145 aa13.78□□□□□ -0.2
HDAC6-206ENST00000426196 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.78□□□□□ -0.2
HDAC6-206ENST00000426196 NEK11Q8NG66 645 aa13.78□□□□□ -0.2
HDAC6-206ENST00000426196 HDAC11Q96DB2 347 aa13.78□□□□□ -0.2
HDAC6-206ENST00000426196 PPM1MQ96MI6 270 aa13.78□□□□□ -0.2
HDAC6-206ENST00000426196 VPS35Q96QK1 796 aa13.78□□□□□ -0.2
HDAC6-206ENST00000426196 GPR63Q9BZJ6 419 aa13.78□□□□□ -0.2
HDAC6-206ENST00000426196 ZCCHC2Q9C0B9 1178 aaKnown RBP13.78□□□□□ -0.2
HDAC6-206ENST00000426196 OLAHQ9NV23 265 aa13.78□□□□□ -0.2
HDAC6-206ENST00000426196 NDOR1Q9UHB4 597 aa13.78□□□□□ -0.2
HDAC6-206ENST00000426196 POMT2Q9UKY4 750 aa13.78□□□□□ -0.2
HDAC6-206ENST00000426196 CFAP20Q9Y6A4 193 aaKnown RBP13.78□□□□□ -0.2
HDAC6-206ENST00000426196 MATN2O00339 956 aa13.77□□□□□ -0.21
HDAC6-206ENST00000426196 ZNF749O43361 778 aa13.77□□□□□ -0.21
HDAC6-206ENST00000426196 MFSD11O43934 449 aa13.77□□□□□ -0.21
HDAC6-206ENST00000426196 HLA-DQB2P05538 268 aa13.77□□□□□ -0.21
HDAC6-206ENST00000426196 CCDC172P0C7W6 258 aa13.77□□□□□ -0.21
HDAC6-206ENST00000426196 POLR2CP19387 275 aaPredicted RBP13.77□□□□□ -0.21
HDAC6-206ENST00000426196 HLA-DPA1P20036 260 aa13.77□□□□□ -0.21
HDAC6-206ENST00000426196 CAPN3P20807 821 aa13.77□□□□□ -0.21
HDAC6-206ENST00000426196 CD86P42081 329 aa13.77□□□□□ -0.21
HDAC6-206ENST00000426196 OTUD4Q01804 1114 aaKnown RBP13.77□□□□□ -0.21
HDAC6-206ENST00000426196 GALNT2Q10471 571 aa13.77□□□□□ -0.21
HDAC6-206ENST00000426196 TLR1Q15399 786 aa13.77□□□□□ -0.21
HDAC6-206ENST00000426196 IFI16Q16666 785 aaKnown RBP13.77□□□□□ -0.21
HDAC6-206ENST00000426196 CCDC122Q5T0U0 273 aa13.77□□□□□ -0.21
HDAC6-206ENST00000426196 AGAP7PQ5VUJ5 663 aa13.77□□□□□ -0.21
HDAC6-206ENST00000426196 ZNF385CQ66K41 422 aaPredicted RBP13.77□□□□□ -0.21
HDAC6-206ENST00000426196 MTFR2Q6P444 385 aa13.77□□□□□ -0.21
HDAC6-206ENST00000426196 MRGPRGQ86SM5 289 aa13.77□□□□□ -0.21
HDAC6-206ENST00000426196 CDH24Q86UP0 819 aa13.77□□□□□ -0.21
HDAC6-206ENST00000426196 GPR135Q8IZ08 494 aa13.77□□□□□ -0.21
HDAC6-206ENST00000426196 OR2Y1Q8NGV0 311 aa13.77□□□□□ -0.21
HDAC6-206ENST00000426196 BRSK1Q8TDC3 778 aa13.77□□□□□ -0.21
HDAC6-206ENST00000426196 TEKT4Q8WW24 435 aa13.77□□□□□ -0.21
HDAC6-206ENST00000426196 ZFPM2Q8WW38 1151 aa13.77□□□□□ -0.21
HDAC6-206ENST00000426196 FATE1Q969F0 183 aa13.77□□□□□ -0.21
HDAC6-206ENST00000426196 AGAP4Q96P64 663 aa13.77□□□□□ -0.21
HDAC6-206ENST00000426196 EPS8L2Q9H6S3 715 aa13.77□□□□□ -0.21
HDAC6-206ENST00000426196 KIR3DX1Q9H7L2 352 aa13.77□□□□□ -0.21
HDAC6-206ENST00000426196 PCDH18Q9HCL0 1135 aa13.77□□□□□ -0.21
HDAC6-206ENST00000426196 SLC24A2Q9UI40 661 aa13.77□□□□□ -0.21
HDAC6-206ENST00000426196 ZNF711Q9Y462 761 aa13.77□□□□□ -0.21
HDAC6-206ENST00000426196 MASP2O00187 686 aa13.76□□□□□ -0.21
HDAC6-206ENST00000426196 POP7O75817 140 aaKnown RBP13.76□□□□□ -0.21
HDAC6-206ENST00000426196 PIRTP0C851 137 aa13.76□□□□□ -0.21
HDAC6-206ENST00000426196 CCNCP24863 283 aa13.76□□□□□ -0.21
HDAC6-206ENST00000426196 NFE2L1Q14494 772 aa13.76□□□□□ -0.21
HDAC6-206ENST00000426196 KRT81Q14533 505 aa13.76□□□□□ -0.21
HDAC6-206ENST00000426196 DPCR1Q3MIW9 517 aa13.76□□□□□ -0.21
HDAC6-206ENST00000426196 DUS1LQ6P1R4 473 aaKnown RBP13.76□□□□□ -0.21
HDAC6-206ENST00000426196 RPTNQ6XPR3 784 aa13.76□□□□□ -0.21
HDAC6-206ENST00000426196 FAM83HQ6ZRV2 1179 aaPredicted RBP13.76□□□□□ -0.21
HDAC6-206ENST00000426196 TMC3Q7Z5M5 1100 aa13.76□□□□□ -0.21
HDAC6-206ENST00000426196 N4BP2L2Q92802 583 aaPredicted RBP13.76□□□□□ -0.21
HDAC6-206ENST00000426196 PTERQ96BW5 349 aa13.76□□□□□ -0.21
HDAC6-206ENST00000426196 CCDC120Q96HB5 630 aa13.76□□□□□ -0.21
HDAC6-206ENST00000426196 C12orf66Q96MD2 445 aa13.76□□□□□ -0.21
HDAC6-206ENST00000426196 XPO4Q9C0E2 1151 aaKnown RBP13.76□□□□□ -0.21
HDAC6-206ENST00000426196 MAGEE1Q9HCI5 957 aa13.76□□□□□ -0.21
HDAC6-206ENST00000426196 IFT80Q9P2H3 777 aaPredicted RBP13.76□□□□□ -0.21
HDAC6-206ENST00000426196 SCINQ9Y6U3 715 aa13.76□□□□□ -0.21
HDAC6-206ENST00000426196 CCDC66A2RUB6 948 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms