RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.33□□□□□ -0.283e-7■□□□□ 10
SNX3-204ENST00000426155 MN1Q10571 1320 aaPredicted RBP13.33□□□□□ -0.28
SNX3-204ENST00000426155 LOC400499M0QZD8 3231 aa13.32□□□□□ -0.28
SNX3-204ENST00000426155 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.32□□□□□ -0.28
SNX3-204ENST00000426155 ESPNB1AK53 854 aa13.32□□□□□ -0.28
SNX3-204ENST00000426155 GOLGA8MH3BSY2 632 aa13.32□□□□□ -0.28
SNX3-204ENST00000426155 HGSO14964 777 aaPredicted RBP13.32□□□□□ -0.28
SNX3-204ENST00000426155 RRP8O43159 456 aaKnown RBP13.32□□□□□ -0.28
SNX3-204ENST00000426155 KCNJ13O60928 360 aa13.32□□□□□ -0.28
SNX3-204ENST00000426155 UBXN7O94888 489 aa13.32□□□□□ -0.28
SNX3-204ENST00000426155 SLC35G4P0C7Q5 338 aa13.32□□□□□ -0.28
SNX3-204ENST00000426155 FGF3P11487 239 aaPredicted RBP13.32□□□□□ -0.28
SNX3-204ENST00000426155 PDHA2P29803 388 aa13.32□□□□□ -0.28
SNX3-204ENST00000426155 PRAMEP78395 509 aa13.32□□□□□ -0.28
SNX3-204ENST00000426155 TLE3Q04726 772 aa13.32□□□□□ -0.28
SNX3-204ENST00000426155 BRD3Q15059 726 aa13.32□□□□□ -0.28
SNX3-204ENST00000426155 CLPPQ16740 277 aaPredicted RBP13.32□□□□□ -0.28
SNX3-204ENST00000426155 PCID2Q5JVF3 399 aa13.32□□□□□ -0.28
SNX3-204ENST00000426155 LRRC8BQ6P9F7 803 aa13.32□□□□□ -0.28
SNX3-204ENST00000426155 WDR74Q6RFH5 385 aaPredicted RBP13.32□□□□□ -0.28
SNX3-204ENST00000426155 LRRC69Q6ZNQ3 347 aa13.32□□□□□ -0.28
SNX3-204ENST00000426155 AVL9Q8NBF6 648 aa13.32□□□□□ -0.28
SNX3-204ENST00000426155 OR4L1Q8NH43 312 aa13.32□□□□□ -0.28
SNX3-204ENST00000426155 KCNE4Q8WWG9 221 aa13.32□□□□□ -0.28
SNX3-204ENST00000426155 RNF31Q96EP0 1072 aa13.32□□□□□ -0.28
SNX3-204ENST00000426155 MFSD3Q96ES6 412 aa13.32□□□□□ -0.28
SNX3-204ENST00000426155 TGM7Q96PF1 710 aa13.32□□□□□ -0.28
SNX3-204ENST00000426155 NAP1L3Q99457 506 aaPredicted RBP13.32□□□□□ -0.28
SNX3-204ENST00000426155 DDX47Q9H0S4 455 aaKnown RBP13.32□□□□□ -0.28
SNX3-204ENST00000426155 UCK1Q9HA47 277 aa13.32□□□□□ -0.28
SNX3-204ENST00000426155 TREX1Q9NSU2 369 aa13.32□□□□□ -0.28
SNX3-204ENST00000426155 BFARQ9NZS9 450 aa13.32□□□□□ -0.28
SNX3-204ENST00000426155 RIMKLBQ9ULI2 386 aa13.32□□□□□ -0.28
SNX3-204ENST00000426155 LHX6Q9UPM6 363 aa13.32□□□□□ -0.28
SNX3-204ENST00000426155 BOLA1Q9Y3E2 137 aa13.32□□□□□ -0.28
SNX3-204ENST00000426155 AHCTF1Q8WYP5 2266 aa13.31□□□□□ -0.28
SNX3-204ENST00000426155 EFCAB7A8K855 629 aa13.31□□□□□ -0.28
SNX3-204ENST00000426155 GOLGA8KD6RF30 607 aa13.31□□□□□ -0.28
SNX3-204ENST00000426155 GOLGA8TH3BQL2 631 aa13.31□□□□□ -0.28
SNX3-204ENST00000426155 CES2O00748 559 aa13.31□□□□□ -0.28
SNX3-204ENST00000426155 CAPN5O15484 640 aaPredicted RBP13.31□□□□□ -0.28
SNX3-204ENST00000426155 KLK10O43240 276 aa13.31□□□□□ -0.28
SNX3-204ENST00000426155 KIF1CO43896 1103 aaKnown RBP13.31□□□□□ -0.28
SNX3-204ENST00000426155 F7P08709 466 aaPredicted RBP13.31□□□□□ -0.28
SNX3-204ENST00000426155 AMD1P17707 334 aa13.31□□□□□ -0.28
SNX3-204ENST00000426155 ITGB6P18564 788 aa13.31□□□□□ -0.28
SNX3-204ENST00000426155 ARNTP27540 789 aa13.31□□□□□ -0.28
SNX3-204ENST00000426155 CSTF2P33240 577 aaKnown RBP eCLIP13.31□□□□□ -0.28
SNX3-204ENST00000426155 MAGEA6P43360 314 aa13.31□□□□□ -0.28
SNX3-204ENST00000426155 CAPZBP47756 277 aa13.31□□□□□ -0.28
SNX3-204ENST00000426155 SRSF6Q13247 344 aaKnown RBP13.31□□□□□ -0.28
SNX3-204ENST00000426155 TRA2AQ13595 282 aaKnown RBP eCLIP13.31□□□□□ -0.28
SNX3-204ENST00000426155 ITIH4Q14624 930 aa13.31□□□□□ -0.28
SNX3-204ENST00000426155 TGIF1Q15583 401 aa13.31□□□□□ -0.28
SNX3-204ENST00000426155 FASTKD1Q53R41 847 aaKnown RBP13.31□□□□□ -0.28
SNX3-204ENST00000426155 PACS1Q6VY07 963 aa13.31□□□□□ -0.28
SNX3-204ENST00000426155 FAM92BQ6ZTR7 304 aa13.31□□□□□ -0.28
SNX3-204ENST00000426155 CAND1Q86VP6 1230 aaKnown RBP13.31□□□□□ -0.28
SNX3-204ENST00000426155 FAM129CQ86XR2 697 aa13.31□□□□□ -0.28
SNX3-204ENST00000426155 AGGF1Q8N302 714 aaeCLIP13.31□□□□□ -0.28
SNX3-204ENST00000426155 LKAAEAR1Q8TD35 194 aa13.31□□□□□ -0.28
SNX3-204ENST00000426155 HEXDCQ8WVB3 486 aa13.31□□□□□ -0.28
SNX3-204ENST00000426155 ART4Q93070 314 aa13.31□□□□□ -0.28
SNX3-204ENST00000426155 CTRCQ99895 268 aa13.31□□□□□ -0.28
SNX3-204ENST00000426155 CCM2Q9BSQ5 444 aa13.31□□□□□ -0.28
SNX3-204ENST00000426155 IL22Q9GZX6 179 aa13.31□□□□□ -0.28
SNX3-204ENST00000426155 CATSPERZQ9NTU4 200 aa13.31□□□□□ -0.28
SNX3-204ENST00000426155 WDR70Q9NW82 654 aa13.31□□□□□ -0.28
SNX3-204ENST00000426155 IL1RAPL1Q9NZN1 696 aa13.31□□□□□ -0.28
SNX3-204ENST00000426155 PDP2Q9P2J9 529 aa13.31□□□□□ -0.28
SNX3-204ENST00000426155 ACSL5Q9ULC5 683 aa13.31□□□□□ -0.28
SNX3-204ENST00000426155 IGSF10Q6WRI0 2623 aa13.3□□□□□ -0.28
SNX3-204ENST00000426155 FAM208BQ5VWN6 2430 aa13.3□□□□□ -0.28
SNX3-204ENST00000426155 GOLGA6L10A0A0M3HER8 536 aa13.3□□□□□ -0.28
SNX3-204ENST00000426155 IQCF5A8MTL0 148 aa13.3□□□□□ -0.28
SNX3-204ENST00000426155 C9P02748 559 aa13.3□□□□□ -0.28
SNX3-204ENST00000426155 TCP1P17987 556 aaKnown RBP13.3□□□□□ -0.28
SNX3-204ENST00000426155 MLLT3P42568 568 aaPredicted RBP13.3□□□□□ -0.28
SNX3-204ENST00000426155 NSG1P42857 185 aa13.3□□□□□ -0.28
SNX3-204ENST00000426155 NPY2RP49146 381 aa13.3□□□□□ -0.28
SNX3-204ENST00000426155 FNTAP49354 379 aa13.3□□□□□ -0.28
SNX3-204ENST00000426155 CLN3Q13286 438 aa13.3□□□□□ -0.28
SNX3-204ENST00000426155 LAMB3Q13751 1172 aa13.3□□□□□ -0.28
SNX3-204ENST00000426155 BOP1Q14137 746 aaKnown RBP13.3□□□□□ -0.28
SNX3-204ENST00000426155 PLCL1Q15111 1095 aa13.3□□□□□ -0.28
SNX3-204ENST00000426155 PAPD7Q5XG87 772 aaKnown RBP13.3□□□□□ -0.28
SNX3-204ENST00000426155 CAPRIN2Q6IMN6 1127 aaKnown RBP13.3□□□□□ -0.28
SNX3-204ENST00000426155 IRGCQ6NXR0 463 aa13.3□□□□□ -0.28
SNX3-204ENST00000426155 NLRP9Q7RTR0 991 aa13.3□□□□□ -0.28
SNX3-204ENST00000426155 ARHGAP22Q7Z5H3 698 aa13.3□□□□□ -0.28
SNX3-204ENST00000426155 ZFAND4Q86XD8 727 aa13.3□□□□□ -0.28
SNX3-204ENST00000426155 BMPERQ8N8U9 685 aa13.3□□□□□ -0.28
SNX3-204ENST00000426155 AGBL5Q8NDL9 886 aa13.3□□□□□ -0.28
SNX3-204ENST00000426155 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.3□□□□□ -0.286e-11■■■■□ 23.5
SNX3-204ENST00000426155 TMEM159Q96B96 161 aa13.3□□□□□ -0.28
SNX3-204ENST00000426155 NAPGQ99747 312 aaPredicted RBP13.3□□□□□ -0.28
SNX3-204ENST00000426155 DPYSL5Q9BPU6 564 aa13.3□□□□□ -0.28
SNX3-204ENST00000426155 OR52A5Q9H2C5 316 aa13.3□□□□□ -0.28
SNX3-204ENST00000426155 APMAPQ9HDC9 416 aa13.3□□□□□ -0.28
SNX3-204ENST00000426155 AKAP7Q9P0M2 348 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms