RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 IL26Q9NPH9 171 aa15.4■□□□□ 0.06
SHOX2-202ENST00000425436 RXFP3Q9NSD7 469 aa15.4■□□□□ 0.06
SHOX2-202ENST00000425436 KCTD5Q9NXV2 234 aa15.4■□□□□ 0.06
SHOX2-202ENST00000425436 HEY2Q9UBP5 337 aa15.4■□□□□ 0.06
SHOX2-202ENST00000425436 FKBPLQ9UIM3 349 aa15.4■□□□□ 0.06
SHOX2-202ENST00000425436 RIF1Q5UIP0 2472 aaKnown RBP15.39■□□□□ 0.05
SHOX2-202ENST00000425436 CCDC162PA2VCL2 907 aa15.39■□□□□ 0.05
SHOX2-202ENST00000425436 FADS2P1A8MWK0 482 aa15.39■□□□□ 0.05
SHOX2-202ENST00000425436 ARHGAP33O14559 1287 aa15.39■□□□□ 0.05
SHOX2-202ENST00000425436 PHGDHO43175 533 aaKnown RBP15.39■□□□□ 0.05
SHOX2-202ENST00000425436 LTA4HP09960 611 aaKnown RBP15.39■□□□□ 0.05
SHOX2-202ENST00000425436 ENGP17813 658 aa15.39■□□□□ 0.05
SHOX2-202ENST00000425436 TRIM23P36406 574 aa15.39■□□□□ 0.05
SHOX2-202ENST00000425436 RABIFP47224 123 aa15.39■□□□□ 0.05
SHOX2-202ENST00000425436 NXPH1P58417 271 aa15.39■□□□□ 0.05
SHOX2-202ENST00000425436 IRF9Q00978 393 aa15.39■□□□□ 0.05
SHOX2-202ENST00000425436 ITGA9Q13797 1035 aa15.39■□□□□ 0.05
SHOX2-202ENST00000425436 KRT72Q14CN4 511 aa15.39■□□□□ 0.05
SHOX2-202ENST00000425436 ACAP2Q15057 778 aa15.39■□□□□ 0.05
SHOX2-202ENST00000425436 TBCCQ15814 346 aa15.39■□□□□ 0.05
SHOX2-202ENST00000425436 CSRP2Q16527 193 aa15.39■□□□□ 0.05
SHOX2-202ENST00000425436 TYSND1Q2T9J0 566 aa15.39■□□□□ 0.05
SHOX2-202ENST00000425436 ZNF542PQ5EBM4 170 aa15.39■□□□□ 0.05
SHOX2-202ENST00000425436 AARS2Q5JTZ9 985 aaKnown RBP15.39■□□□□ 0.05
SHOX2-202ENST00000425436 LRRC8EQ6NSJ5 796 aa15.39■□□□□ 0.05
SHOX2-202ENST00000425436 MTDHQ86UE4 582 aaKnown RBP15.39■□□□□ 0.05
SHOX2-202ENST00000425436 IQCHQ86VS3 1027 aa15.39■□□□□ 0.05
SHOX2-202ENST00000425436 HEATR4Q86WZ0 1026 aa15.39■□□□□ 0.05
SHOX2-202ENST00000425436 CEP97Q8IW35 865 aa15.39■□□□□ 0.05
SHOX2-202ENST00000425436 RAVER1Q8IY67 606 aaKnown RBP15.39■□□□□ 0.05
SHOX2-202ENST00000425436 KIRREL3Q8IZU9 778 aa15.39■□□□□ 0.05
SHOX2-202ENST00000425436 ACVR1CQ8NER5 493 aa15.39■□□□□ 0.05
SHOX2-202ENST00000425436 SKA1Q96BD8 255 aa15.39■□□□□ 0.05
SHOX2-202ENST00000425436 SUDS3Q9H7L9 328 aaPredicted RBP15.39■□□□□ 0.05
SHOX2-202ENST00000425436 ZNF358Q9NW07 568 aa15.39■□□□□ 0.05
SHOX2-202ENST00000425436 APOBEC2Q9Y235 224 aaKnown RBP15.39■□□□□ 0.05
SHOX2-202ENST00000425436 ZNF292O60281 2723 aa15.39■□□□□ 0.05
SHOX2-202ENST00000425436 LNP1A1A4G5 178 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 CCDC189A1A4V9 331 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 SLCO1B7G3V0H7 640 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 H7C0S8 307 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 GPR39O43194 453 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 UGT1A6P19224 532 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 UGT1A1P22309 533 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 UGT1A4P22310 534 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 CA5AP35218 305 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 UGT1A3P35503 534 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 UGT1A5P35504 534 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 PPARGP37231 505 aaPredicted RBP15.38■□□□□ 0.05
SHOX2-202ENST00000425436 SPAM1P38567 509 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 CTSKP43235 329 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 THOP1P52888 689 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 DNAJB13P59910 316 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 CHRNA6Q15825 494 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 CLNKQ7Z7G1 428 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 TRIM74Q86UV6 250 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 NLRP8Q86W28 1048 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 CENPLQ8N0S6 344 aaPredicted RBP15.38■□□□□ 0.05
SHOX2-202ENST00000425436 FSTL5Q8N475 847 aaPredicted RBP15.38■□□□□ 0.05
SHOX2-202ENST00000425436 KCTD4Q8WVF5 259 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 INPP5DQ92835 1189 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 KLHL29Q96CT2 875 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 GPR78Q96P69 363 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 PLEKHG4BQ96PX9 1271 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 WDR26Q9H7D7 661 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 IL21RQ9HBE5 538 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 GPAMQ9HCL2 828 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 RAD18Q9NS91 495 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 CNOT6Q9ULM6 557 aaKnown RBP15.38■□□□□ 0.05
SHOX2-202ENST00000425436 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.38■□□□□ 0.05
SHOX2-202ENST00000425436 COMMD10Q9Y6G5 202 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 PCDH15Q96QU1 1955 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 GLYATL1P3A0A0U1RQE8 302 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 TMEM202A6NGA9 273 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 TARM1B6A8C7 271 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 GAPDHSO14556 408 aaPredicted RBP15.38■□□□□ 0.05
SHOX2-202ENST00000425436 LRP3O75074 770 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 HSPA4LO95757 839 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 SYPP08247 313 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 CD9P21926 228 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 ATP5F1P24539 256 aaPredicted RBP15.38■□□□□ 0.05
SHOX2-202ENST00000425436 TTPAP49638 278 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 AQP5P55064 265 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 DCDC1P59894 354 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 YPEL5P62699 121 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 CDK3Q00526 305 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 FZD2Q14332 565 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 HLA-BQ31612 363 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 ATP13A5Q4VNC0 1218 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 ZNF648Q5T619 568 aaPredicted RBP15.38■□□□□ 0.05
SHOX2-202ENST00000425436 ENPP7Q6UWV6 458 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 PRR23CQ6ZRP0 262 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 ZCCHC23Q6ZST2 131 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 TMEM151AQ8N4L1 468 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 TRAM1L1Q8N609 369 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 FAM174AQ8TBP5 190 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 STON2Q8WXE9 905 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 NXNL1Q96CM4 212 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 UBXN10Q96LJ8 280 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 RAB3IPQ96QF0 476 aaPredicted RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms