RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 DTX3LQ8TDB6 740 aa13.19□□□□□ -0.3
PRPF39-202ENST00000424478 DNASE2BQ8WZ79 361 aa13.19□□□□□ -0.3
PRPF39-202ENST00000424478 SCYL1Q96KG9 808 aa13.19□□□□□ -0.3
PRPF39-202ENST00000424478 ZCCHC2Q9C0B9 1178 aaKnown RBP13.19□□□□□ -0.3
PRPF39-202ENST00000424478 LATS2Q9NRM7 1088 aa13.19□□□□□ -0.3
PRPF39-202ENST00000424478 SPATS2LQ9NUQ6 558 aaKnown RBP13.19□□□□□ -0.3
PRPF39-202ENST00000424478 EMCNQ9ULC0 261 aa13.19□□□□□ -0.3
PRPF39-202ENST00000424478 DHRS7Q9Y394 339 aa13.19□□□□□ -0.3
PRPF39-202ENST00000424478 SNX11Q9Y5W9 270 aa13.19□□□□□ -0.3
PRPF39-202ENST00000424478 TNRC6BQ9UPQ9 1833 aaKnown RBP13.19□□□□□ -0.3
PRPF39-202ENST00000424478 OR52A4PA6NMU1 304 aa13.18□□□□□ -0.3
PRPF39-202ENST00000424478 GALR2O43603 387 aaPredicted RBP13.18□□□□□ -0.3
PRPF39-202ENST00000424478 VEGFDO43915 354 aa13.18□□□□□ -0.3
PRPF39-202ENST00000424478 MAGEA12P43365 314 aa13.18□□□□□ -0.3
PRPF39-202ENST00000424478 ADARP55265 1226 aaKnown RBP13.18□□□□□ -0.3
PRPF39-202ENST00000424478 OR4D1Q15615 310 aa13.18□□□□□ -0.3
PRPF39-202ENST00000424478 KIF19Q2TAC6 998 aa13.18□□□□□ -0.3
PRPF39-202ENST00000424478 CCSMST1Q4G0I0 132 aa13.18□□□□□ -0.3
PRPF39-202ENST00000424478 TBC1D1Q86TI0 1168 aaPredicted RBP13.18□□□□□ -0.3
PRPF39-202ENST00000424478 AMZ2Q86W34 360 aa13.18□□□□□ -0.3
PRPF39-202ENST00000424478 JPH3Q8WXH2 748 aaPredicted RBP13.18□□□□□ -0.3
PRPF39-202ENST00000424478 DLG3Q92796 817 aa13.18□□□□□ -0.3
PRPF39-202ENST00000424478 MTBPQ96DY7 904 aa13.18□□□□□ -0.3
PRPF39-202ENST00000424478 BTN3A1O00481 513 aa13.18□□□□□ -0.3
PRPF39-202ENST00000424478 CNTFP26441 200 aa13.18□□□□□ -0.3
PRPF39-202ENST00000424478 CSRP3P50461 194 aa13.18□□□□□ -0.3
PRPF39-202ENST00000424478 ARHGAP8P85298 464 aa13.18□□□□□ -0.3
PRPF39-202ENST00000424478 TAF1BQ53T94 588 aaPredicted RBP13.18□□□□□ -0.3
PRPF39-202ENST00000424478 RPS27LQ71UM5 84 aaKnown RBP13.18□□□□□ -0.3
PRPF39-202ENST00000424478 ARMC2Q8NEN0 867 aa13.18□□□□□ -0.3
PRPF39-202ENST00000424478 ESAMQ96AP7 390 aa13.18□□□□□ -0.3
PRPF39-202ENST00000424478 IL21RQ9HBE5 538 aa13.18□□□□□ -0.3
PRPF39-202ENST00000424478 UCKL1Q9NWZ5 548 aa13.18□□□□□ -0.3
PRPF39-202ENST00000424478 WISP3O95389 354 aaPredicted RBP13.18□□□□□ -0.3
PRPF39-202ENST00000424478 JUNDP17535 347 aa13.18□□□□□ -0.3
PRPF39-202ENST00000424478 TFEBP19484 476 aa13.18□□□□□ -0.3
PRPF39-202ENST00000424478 HK3P52790 923 aa13.18□□□□□ -0.3
PRPF39-202ENST00000424478 KIAA1024LP59773 190 aa13.18□□□□□ -0.3
PRPF39-202ENST00000424478 RASA2Q15283 850 aa13.18□□□□□ -0.3
PRPF39-202ENST00000424478 C18orf21Q32NC0 220 aaPredicted RBP13.18□□□□□ -0.3
PRPF39-202ENST00000424478 WDR45BQ5MNZ6 344 aa13.18□□□□□ -0.3
PRPF39-202ENST00000424478 AGBL2Q5U5Z8 902 aa13.18□□□□□ -0.3
PRPF39-202ENST00000424478 CCDC63Q8NA47 563 aa13.18□□□□□ -0.3
PRPF39-202ENST00000424478 NELL1Q92832 810 aa13.18□□□□□ -0.3
PRPF39-202ENST00000424478 COG4Q9H9E3 785 aa13.18□□□□□ -0.3
PRPF39-202ENST00000424478 KCTD5Q9NXV2 234 aa13.18□□□□□ -0.3
PRPF39-202ENST00000424478 SCHIP1Q9P0W5 487 aaPredicted RBP13.18□□□□□ -0.3
PRPF39-202ENST00000424478 GRID1Q9ULK0 1009 aa13.18□□□□□ -0.3
PRPF39-202ENST00000424478 ARID1BQ8NFD5 2236 aaPredicted RBP13.17□□□□□ -0.3
PRPF39-202ENST00000424478 ATP8B1O43520 1251 aa13.17□□□□□ -0.3
PRPF39-202ENST00000424478 TYROBPO43914 113 aa13.17□□□□□ -0.3
PRPF39-202ENST00000424478 GUCA1CO95843 209 aa13.17□□□□□ -0.3
PRPF39-202ENST00000424478 FTH1P02794 183 aa13.17□□□□□ -0.3
PRPF39-202ENST00000424478 PYGLP06737 847 aa13.17□□□□□ -0.3
PRPF39-202ENST00000424478 MYF5P13349 255 aa13.17□□□□□ -0.3
PRPF39-202ENST00000424478 ACTR1BP42025 376 aa13.17□□□□□ -0.3
PRPF39-202ENST00000424478 CLCNKAP51800 687 aa13.17□□□□□ -0.3
PRPF39-202ENST00000424478 AFF3P51826 1226 aaKnown RBP13.17□□□□□ -0.3
PRPF39-202ENST00000424478 ACTR1AP61163 376 aa13.17□□□□□ -0.3
PRPF39-202ENST00000424478 BNIP3Q12983 259 aa13.17□□□□□ -0.3
PRPF39-202ENST00000424478 PRKG2Q13237 762 aa13.17□□□□□ -0.3
PRPF39-202ENST00000424478 TIFABQ6ZNK6 161 aa13.17□□□□□ -0.3
PRPF39-202ENST00000424478 FSTL5Q8N475 847 aaPredicted RBP13.17□□□□□ -0.3
PRPF39-202ENST00000424478 MFSD2AQ8NA29 543 aa13.17□□□□□ -0.3
PRPF39-202ENST00000424478 GPR78Q96P69 363 aa13.17□□□□□ -0.3
PRPF39-202ENST00000424478 ARRDC1-AS1Q9H2J1 176 aa13.17□□□□□ -0.3
PRPF39-202ENST00000424478 ABCF3Q9NUQ8 709 aa13.17□□□□□ -0.3
PRPF39-202ENST00000424478 XPR1Q9UBH6 696 aa13.17□□□□□ -0.3
PRPF39-202ENST00000424478 TBC1D29Q9UFV1 150 aa13.17□□□□□ -0.3
PRPF39-202ENST00000424478 PILRBQ9UKJ0 227 aa13.17□□□□□ -0.3
PRPF39-202ENST00000424478 PLAGL1Q9UM63 463 aa13.17□□□□□ -0.3
PRPF39-202ENST00000424478 ANKRD6Q9Y2G4 727 aa13.17□□□□□ -0.3
PRPF39-202ENST00000424478 OTOGLQ3ZCN5 2332 aa13.17□□□□□ -0.3
PRPF39-202ENST00000424478 RALGAPA1Q6GYQ0 2036 aa13.17□□□□□ -0.3
PRPF39-202ENST00000424478 PDZK1P1A8MUH7 402 aa13.17□□□□□ -0.3
PRPF39-202ENST00000424478 BDKRB1P46663 353 aa13.17□□□□□ -0.3
PRPF39-202ENST00000424478 IL2P60568 153 aa13.17□□□□□ -0.3
PRPF39-202ENST00000424478 PHKG1Q16816 387 aa13.17□□□□□ -0.3
PRPF39-202ENST00000424478 PRSS33Q8NF86 280 aa13.17□□□□□ -0.3
PRPF39-202ENST00000424478 ISL2Q96A47 359 aa13.17□□□□□ -0.3
PRPF39-202ENST00000424478 TMEM159Q96B96 161 aa13.17□□□□□ -0.3
PRPF39-202ENST00000424478 APOPT1Q96IL0 206 aa13.17□□□□□ -0.3
PRPF39-202ENST00000424478 UBXN10Q96LJ8 280 aa13.17□□□□□ -0.3
PRPF39-202ENST00000424478 PANX3Q96QZ0 392 aa13.17□□□□□ -0.3
PRPF39-202ENST00000424478 OR2M4Q96R27 311 aa13.17□□□□□ -0.3
PRPF39-202ENST00000424478 PPCSQ9HAB8 311 aa13.17□□□□□ -0.3
PRPF39-202ENST00000424478 ASXL3Q9C0F0 2248 aa13.17□□□□□ -0.3
PRPF39-202ENST00000424478 SBK3P0C264 359 aa13.16□□□□□ -0.3
PRPF39-202ENST00000424478 CD1DP15813 335 aa13.16□□□□□ -0.3
PRPF39-202ENST00000424478 CRABP2P29373 138 aa13.16□□□□□ -0.3
PRPF39-202ENST00000424478 SLC18A2Q05940 514 aa13.16□□□□□ -0.3
PRPF39-202ENST00000424478 BCL7AQ4VC05 210 aa13.16□□□□□ -0.3
PRPF39-202ENST00000424478 CLEC14AQ86T13 490 aa13.16□□□□□ -0.3
PRPF39-202ENST00000424478 GATAD2AQ86YP4 633 aa13.16□□□□□ -0.3
PRPF39-202ENST00000424478 PHACTR4Q8IZ21 702 aa13.16□□□□□ -0.3
PRPF39-202ENST00000424478 C2orf73Q8N5S3 287 aaPredicted RBP13.16□□□□□ -0.3
PRPF39-202ENST00000424478 INPP5DQ92835 1189 aa13.16□□□□□ -0.3
PRPF39-202ENST00000424478 TSPAN17Q96FV3 270 aa13.16□□□□□ -0.3
PRPF39-202ENST00000424478 WWP1Q9H0M0 922 aa13.16□□□□□ -0.3
PRPF39-202ENST00000424478 APOBEC3BQ9UH17 382 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms