RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 POTEKPQ9BYX7 375 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 FAM192AQ9GZU8 254 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 NDST4Q9H3R1 872 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 SH2D4AQ9H788 454 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 ERVMER34-1Q9H9K5 563 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 GPR35Q9HC97 309 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 FBRSL1Q9HCM7 1045 aaKnown RBP2.85□□□□□ -1.95
PMS1-209ENST00000424059 SLC40A1Q9NP59 571 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 ZDHHC4Q9NPG8 344 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 SLC35C2Q9NQQ7 365 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 SAMSN1Q9NSI8 373 aaKnown RBP2.85□□□□□ -1.95
PMS1-209ENST00000424059 AGPAT5Q9NUQ2 364 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 RAB20Q9NX57 234 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 SMPD3Q9NY59 655 aaPredicted RBP2.85□□□□□ -1.95
PMS1-209ENST00000424059 TMOD2Q9NZR1 351 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 COPG2Q9UBF2 871 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 BAIAP2L1Q9UHR4 511 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 TUBD1Q9UJT1 453 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 PCDHA12Q9UN75 941 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 PACSIN2Q9UNF0 486 aaPredicted RBP2.85□□□□□ -1.95
PMS1-209ENST00000424059 DIMT1Q9UNQ2 313 aaKnown RBP2.85□□□□□ -1.95
PMS1-209ENST00000424059 SH2B3Q9UQQ2 575 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 PCDHGA5Q9Y5G8 931 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 GMPPBQ9Y5P6 360 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 CLCA3PQ9Y6N3 262 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 POLR2AP24928 1970 aaKnown RBP2.85□□□□□ -1.95
PMS1-209ENST00000424059 PLEKHG1Q9ULL1 1385 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 WDR7Q9Y4E6 1490 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 PVALEFA0A1B0GWK0 134 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 ZNF98A6NK75 572 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 KBTBD13C9JR72 458 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 O00370 1275 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 FBP2O00757 339 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 SH2B2O14492 632 aaPredicted RBP2.85□□□□□ -1.95
PMS1-209ENST00000424059 LDLRAD4O15165 306 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 CD3EAPO15446 510 aaKnown RBP2.85□□□□□ -1.95
PMS1-209ENST00000424059 AP5Z1O43299 807 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 VEGFDO43915 354 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 PCDHGA12O60330 932 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 CABYRO75952 493 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 NSA2O95478 260 aaKnown RBP2.85□□□□□ -1.95
PMS1-209ENST00000424059 AFPP02771 609 aaKnown RBP2.85□□□□□ -1.95
PMS1-209ENST00000424059 TFRCP02786 760 aaKnown RBP2.85□□□□□ -1.95
PMS1-209ENST00000424059 INHBAP08476 426 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 NR2F6P10588 404 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 GHRP10912 638 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 UMPSP11172 480 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 ITGALP20701 1170 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 CYP2B6P20813 491 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 CMA1P23946 247 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 NR2F2P24468 414 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 RPA1P27694 616 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 TYK2P29597 1187 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 CDH5P33151 784 aaPredicted RBP2.85□□□□□ -1.95
PMS1-209ENST00000424059 NUDT1P36639 197 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 NNMTP40261 264 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 KIR3DL2P43630 455 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 GSTM5P46439 218 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 CDKN1BP46527 198 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 ALDH7A1P49419 539 aaKnown RBP2.85□□□□□ -1.95
PMS1-209ENST00000424059 CASP4P49662 377 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 SLC26A2P50443 739 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 CCR9P51686 369 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 HNRNPMP52272 730 aaKnown RBP eCLIP2.85□□□□□ -1.95
PMS1-209ENST00000424059 ARFIP2P53365 341 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 SUCLG1P53597 346 aaKnown RBP2.85□□□□□ -1.95
PMS1-209ENST00000424059 SPCS3P61009 180 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 ARF3P61204 181 aaPredicted RBP2.85□□□□□ -1.95
PMS1-209ENST00000424059 ARF1P84077 181 aaKnown RBP2.85□□□□□ -1.95
PMS1-209ENST00000424059 MC1RQ01726 317 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 KIF23Q02241 960 aaPredicted RBP2.85□□□□□ -1.95
PMS1-209ENST00000424059 CREB5Q02930 508 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 CEBPZQ03701 1054 aaKnown RBP2.85□□□□□ -1.95
PMS1-209ENST00000424059 GAD2Q05329 585 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 SNTA1Q13424 505 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 PDK1Q15118 436 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 SMU1Q2TAY7 513 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 CCDC58Q4VC31 144 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 GPAT3Q53EU6 434 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 PLA1AQ53H76 456 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 XKR4Q5GH76 650 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 BRMS1LQ5PSV4 323 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 MPP7Q5T2T1 576 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 LCN1P1Q5VSP4 162 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 ARHGEF16Q5VV41 709 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 IZUMO3Q5VZ72 239 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 RRAGBQ5VZM2 374 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 ANKRD40Q6AI12 368 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 USP43Q70EL4 1123 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 FAM122BQ7Z309 247 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 SZRD1Q7Z422 152 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 FAM131BQ86XD5 332 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 CNTN4Q8IWV2 1026 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 FAM109AQ8N4B1 249 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 SETD9Q8NE22 299 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 C1orf162Q8NEQ5 155 aaPredicted RBP2.85□□□□□ -1.95
PMS1-209ENST00000424059 LHFPL5Q8TAF8 219 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 PPP1R35Q8TAP8 253 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 DEPDC1BQ8WUY9 529 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 ROBO4Q8WZ75 1007 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms