RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 SPOCD1Q6ZMY3 1216 aa16.28■□□□□ 0.2
CHCHD3-202ENST00000423635 MRGPREQ86SM8 312 aa16.28■□□□□ 0.2
CHCHD3-202ENST00000423635 CUZD1Q86UP6 607 aa16.28■□□□□ 0.2
CHCHD3-202ENST00000423635 KCNMB4Q86W47 210 aa16.28■□□□□ 0.2
CHCHD3-202ENST00000423635 GALNT16Q8N428 558 aa16.28■□□□□ 0.2
CHCHD3-202ENST00000423635 TTC30BQ8N4P2 665 aa16.28■□□□□ 0.2
CHCHD3-202ENST00000423635 ZADH2Q8N4Q0 377 aa16.28■□□□□ 0.2
CHCHD3-202ENST00000423635 PQLC3Q8N755 202 aa16.28■□□□□ 0.2
CHCHD3-202ENST00000423635 BEND7Q8N7W2 519 aaPredicted RBP16.28■□□□□ 0.2
CHCHD3-202ENST00000423635 OR1L3Q8NH93 324 aa16.28■□□□□ 0.2
CHCHD3-202ENST00000423635 GDAP1Q8TB36 358 aa16.28■□□□□ 0.2
CHCHD3-202ENST00000423635 TM9SF4Q92544 642 aa16.28■□□□□ 0.2
CHCHD3-202ENST00000423635 INSM2Q96T92 566 aaPredicted RBP16.28■□□□□ 0.2
CHCHD3-202ENST00000423635 TLR10Q9BXR5 811 aa16.28■□□□□ 0.2
CHCHD3-202ENST00000423635 UNKQ9C0B0 810 aaKnown RBP16.28■□□□□ 0.2
CHCHD3-202ENST00000423635 HSD3B7Q9H2F3 369 aa16.28■□□□□ 0.2
CHCHD3-202ENST00000423635 IMP3Q9NV31 184 aaKnown RBP16.28■□□□□ 0.2
CHCHD3-202ENST00000423635 PADI2Q9Y2J8 665 aa16.28■□□□□ 0.2
CHCHD3-202ENST00000423635 CSMD2Q7Z408 3487 aa16.27■□□□□ 0.2
CHCHD3-202ENST00000423635 SLC9B1P1A6NJY1 282 aa16.27■□□□□ 0.2
CHCHD3-202ENST00000423635 SLC4A1P02730 911 aa16.27■□□□□ 0.2
CHCHD3-202ENST00000423635 ITGA3P26006 1051 aa16.27■□□□□ 0.2
CHCHD3-202ENST00000423635 CTSCP53634 463 aa16.27■□□□□ 0.2
CHCHD3-202ENST00000423635 MYL5Q02045 173 aa16.27■□□□□ 0.2
CHCHD3-202ENST00000423635 KLHL30Q0D2K2 578 aa16.27■□□□□ 0.2
CHCHD3-202ENST00000423635 XRCC4Q13426 336 aa16.27■□□□□ 0.2
CHCHD3-202ENST00000423635 SLC14A2Q15849 920 aa16.27■□□□□ 0.2
CHCHD3-202ENST00000423635 TMEM220Q6QAJ8 160 aa16.27■□□□□ 0.2
CHCHD3-202ENST00000423635 NT5DC3Q86UY8 548 aa16.27■□□□□ 0.2
CHCHD3-202ENST00000423635 CLEC1AQ8NC01 280 aa16.27■□□□□ 0.2
CHCHD3-202ENST00000423635 KCTD6Q8NC69 237 aa16.27■□□□□ 0.2
CHCHD3-202ENST00000423635 ZCCHC2Q9C0B9 1178 aaKnown RBP16.27■□□□□ 0.2
CHCHD3-202ENST00000423635 SLC25A51Q9H1U9 297 aa16.27■□□□□ 0.2
CHCHD3-202ENST00000423635 KIR3DX1Q9H7L2 352 aa16.27■□□□□ 0.2
CHCHD3-202ENST00000423635 BPIFA1Q9NP55 256 aa16.27■□□□□ 0.2
CHCHD3-202ENST00000423635 IL26Q9NPH9 171 aa16.27■□□□□ 0.2
CHCHD3-202ENST00000423635 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.27■□□□□ 0.29e-11■■■■□ 21.7
CHCHD3-202ENST00000423635 SERTAD3Q9UJW9 196 aa16.27■□□□□ 0.2
CHCHD3-202ENST00000423635 ANAPC7Q9UJX3 599 aa16.27■□□□□ 0.2
CHCHD3-202ENST00000423635 POMT2Q9UKY4 750 aa16.27■□□□□ 0.2
CHCHD3-202ENST00000423635 CFAP20Q9Y6A4 193 aaKnown RBP16.27■□□□□ 0.2
CHCHD3-202ENST00000423635 AKAP9Q99996 3911 aa16.27■□□□□ 0.19
CHCHD3-202ENST00000423635 HEATR9A2RTY3 570 aa16.26■□□□□ 0.19
CHCHD3-202ENST00000423635 TMEM150CB9EJG8 249 aa16.26■□□□□ 0.19
CHCHD3-202ENST00000423635 HBQ1P09105 142 aa16.26■□□□□ 0.19
CHCHD3-202ENST00000423635 CYP2A7P20853 494 aa16.26■□□□□ 0.19
CHCHD3-202ENST00000423635 AGXTP21549 392 aa16.26■□□□□ 0.19
CHCHD3-202ENST00000423635 OTX2P32243 289 aa16.26■□□□□ 0.19
CHCHD3-202ENST00000423635 LLGL1Q15334 1064 aa16.26■□□□□ 0.19
CHCHD3-202ENST00000423635 PTCHD3Q3KNS1 767 aa16.26■□□□□ 0.19
CHCHD3-202ENST00000423635 LDLRAP1Q5SW96 308 aa16.26■□□□□ 0.19
CHCHD3-202ENST00000423635 ZDHHC20Q5W0Z9 365 aa16.26■□□□□ 0.19
CHCHD3-202ENST00000423635 HGSNATQ68CP4 663 aa16.26■□□□□ 0.19
CHCHD3-202ENST00000423635 MAP7D3Q8IWC1 876 aa16.26■□□□□ 0.19
CHCHD3-202ENST00000423635 THAP2Q9H0W7 228 aa16.26■□□□□ 0.19
CHCHD3-202ENST00000423635 RUBCNLQ9H714 662 aa16.26■□□□□ 0.19
CHCHD3-202ENST00000423635 CBX8Q9HC52 389 aa16.26■□□□□ 0.19
CHCHD3-202ENST00000423635 ZBTB20Q9HC78 741 aaPredicted RBP16.26■□□□□ 0.19
CHCHD3-202ENST00000423635 SPO11Q9Y5K1 396 aa16.26■□□□□ 0.19
CHCHD3-202ENST00000423635 MDC1Q14676 2089 aaKnown RBP16.26■□□□□ 0.19
CHCHD3-202ENST00000423635 ADGRG4Q8IZF6 3080 aa16.26■□□□□ 0.19
CHCHD3-202ENST00000423635 C9J4A7 227 aa16.25■□□□□ 0.19
CHCHD3-202ENST00000423635 MYO1FO00160 1098 aa16.25■□□□□ 0.19
CHCHD3-202ENST00000423635 MATN2O00339 956 aa16.25■□□□□ 0.19
CHCHD3-202ENST00000423635 DDX3YO15523 660 aaKnown RBP16.25■□□□□ 0.19
CHCHD3-202ENST00000423635 NDST3O95803 873 aa16.25■□□□□ 0.19
CHCHD3-202ENST00000423635 POLR2CP19387 275 aaPredicted RBP16.25■□□□□ 0.19
CHCHD3-202ENST00000423635 CDH3P22223 829 aa16.25■□□□□ 0.19
CHCHD3-202ENST00000423635 PREPP48147 710 aa16.25■□□□□ 0.19
CHCHD3-202ENST00000423635 PRKAA1Q13131 559 aa16.25■□□□□ 0.19
CHCHD3-202ENST00000423635 CCDC70Q6NSX1 233 aa16.25■□□□□ 0.19
CHCHD3-202ENST00000423635 RBM43Q6ZSC3 357 aaKnown RBP16.25■□□□□ 0.19
CHCHD3-202ENST00000423635 MCEMP1Q8IX19 187 aa16.25■□□□□ 0.19
CHCHD3-202ENST00000423635 DDHD1Q8NEL9 900 aa16.25■□□□□ 0.19
CHCHD3-202ENST00000423635 C12orf66Q96MD2 445 aa16.25■□□□□ 0.19
CHCHD3-202ENST00000423635 C17orf62Q9BQA9 187 aa16.25■□□□□ 0.19
CHCHD3-202ENST00000423635 WWP1Q9H0M0 922 aa16.25■□□□□ 0.19
CHCHD3-202ENST00000423635 ACSL5Q9ULC5 683 aa16.25■□□□□ 0.19
CHCHD3-202ENST00000423635 OSGIN2Q9Y236 505 aa16.25■□□□□ 0.19
CHCHD3-202ENST00000423635 COLEC10Q9Y6Z7 277 aa16.25■□□□□ 0.19
CHCHD3-202ENST00000423635 F8P00451 2351 aa16.25■□□□□ 0.19
CHCHD3-202ENST00000423635 ZFHX3Q15911 3703 aa16.25■□□□□ 0.19
CHCHD3-202ENST00000423635 KLHL33A6NCF5 533 aa16.24■□□□□ 0.19
CHCHD3-202ENST00000423635 MGAT4DA6NG13 374 aa16.24■□□□□ 0.19
CHCHD3-202ENST00000423635 OR2AG2A6NM03 316 aa16.24■□□□□ 0.19
CHCHD3-202ENST00000423635 E7EQ34 232 aa16.24■□□□□ 0.19
CHCHD3-202ENST00000423635 PEX12O00623 359 aa16.24■□□□□ 0.19
CHCHD3-202ENST00000423635 E2F3O00716 465 aa16.24■□□□□ 0.19
CHCHD3-202ENST00000423635 ZNF749O43361 778 aa16.24■□□□□ 0.19
CHCHD3-202ENST00000423635 UGT1A9O60656 530 aa16.24■□□□□ 0.19
CHCHD3-202ENST00000423635 CYP1A2P05177 515 aa16.24■□□□□ 0.19
CHCHD3-202ENST00000423635 CD63P08962 238 aa16.24■□□□□ 0.19
CHCHD3-202ENST00000423635 SKILP12757 684 aa16.24■□□□□ 0.19
CHCHD3-202ENST00000423635 EDN3P14138 238 aa16.24■□□□□ 0.19
CHCHD3-202ENST00000423635 UGT1A6P19224 532 aa16.24■□□□□ 0.19
CHCHD3-202ENST00000423635 UGT1A1P22309 533 aa16.24■□□□□ 0.19
CHCHD3-202ENST00000423635 UGT1A4P22310 534 aa16.24■□□□□ 0.19
CHCHD3-202ENST00000423635 PRDX3P30048 256 aaKnown RBP16.24■□□□□ 0.19
CHCHD3-202ENST00000423635 SSR1P43307 286 aaKnown RBP16.24■□□□□ 0.19
CHCHD3-202ENST00000423635 ARCN1P48444 511 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms