RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 USP28Q96RU2 1077 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 NEUROG2Q9H2A3 272 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 MAGEF1Q9HAY2 307 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 ASCL3Q9NQ33 180 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 WASH6PQ9NQA3 447 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 FBXL12Q9NXK8 326 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 GGA2Q9UJY4 613 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 INTS6Q9UL03 887 aaKnown RBP4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 HPSEQ9Y251 543 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 NCKAP1Q9Y2A7 1128 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 TMEM131Q92545 1883 aa4.72□□□□□ -1.65
CDC42EP3-202ENST00000422687 AHCTF1Q8WYP5 2266 aa4.71□□□□□ -1.65
CDC42EP3-202ENST00000422687 CENPEQ02224 2701 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 LY6G6EA0A0G2JKS1 128 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 K7ENP7 123 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 PDXKO00764 312 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 MID1O15344 667 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 CD3EAPO15446 510 aaKnown RBP4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 KLRC4O43908 158 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 COQ9O75208 318 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 GP1BAP07359 652 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 SRPRAP08240 638 aaKnown RBP4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 GOT1P17174 413 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 HK1P19367 917 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 POLR2EP19388 210 aaKnown RBP4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 TRIM21P19474 475 aaKnown RBP4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 CHRM3P20309 590 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 SLC8A1P32418 973 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 MAN1A1P33908 653 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 DRD3P35462 400 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 MSX2P35548 267 aaPredicted RBP4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 BUD31P41223 144 aaPredicted RBP4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 CASP2P42575 452 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 HARS2P49590 506 aaKnown RBP4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 CSRP3P50461 194 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 ADPRHP54922 357 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 AP2B1P63010 937 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 MPP1Q00013 466 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 NFIL3Q16649 462 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 TAF1BQ53T94 588 aaPredicted RBP4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 SLC45A4Q5BKX6 768 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 FAM133BQ5BKY9 247 aaKnown RBP4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 ERICH6BQ5W0A0 696 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 ABLIM2Q6H8Q1 611 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 NAPEPLDQ6IQ20 393 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 RETSATQ6NUM9 610 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 TCTN3Q6NUS6 607 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 INO80CQ6PI98 192 aaPredicted RBP4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 SHC4Q6S5L8 630 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 KLHL17Q6TDP4 642 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 PIGZQ86VD9 579 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 LURAP1LQ8IV03 231 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 SLC25A45Q8N413 288 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 FAM109AQ8N4B1 249 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 TTC39CQ8N584 583 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 AADATQ8N5Z0 425 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 IQUBQ8NA54 791 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 ANKRD52Q8NB46 1076 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 SLC4A11Q8NBS3 891 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 KIAA0895Q8NCT3 520 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 OR56A1Q8NGH5 318 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 OR4C6Q8NH72 309 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 JAKMIP2Q96AA8 810 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 SERAC1Q96JX3 654 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 GNRHR2Q96P88 292 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 LGMNQ99538 433 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 PTDSS2Q9BVG9 487 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 ULBP1Q9BZM6 244 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 REXO4Q9GZR2 422 aaKnown RBP4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 SLC25A32Q9H2D1 315 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 CXorf36Q9H7Y0 433 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 POLR1BQ9H9Y6 1135 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 CPNE5Q9HCH3 593 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 OLA1Q9NTK5 396 aaKnown RBP4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 CNOT11Q9UKZ1 510 aaKnown RBP4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 NEU2Q9Y3R4 380 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 CHST2Q9Y4C5 530 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 U3KQA8 63 aa4.71□□□□□ -1.66
CDC42EP3-202ENST00000422687 ITPR2Q14571 2701 aa4.7□□□□□ -1.66
CDC42EP3-202ENST00000422687 LRBAP50851 2863 aa4.7□□□□□ -1.66
CDC42EP3-202ENST00000422687 EDDM13A0A1B0GTR0 161 aa4.7□□□□□ -1.66
CDC42EP3-202ENST00000422687 A0A1W2PNU3 283 aaPredicted RBP4.7□□□□□ -1.66
CDC42EP3-202ENST00000422687 A0A1W2PS29 197 aa4.7□□□□□ -1.66
CDC42EP3-202ENST00000422687 VPS37CA5D8V6 355 aaPredicted RBP4.7□□□□□ -1.66
CDC42EP3-202ENST00000422687 FAM47DPA6NHR8 397 aa4.7□□□□□ -1.66
CDC42EP3-202ENST00000422687 YJEFN3A6XGL0 299 aa4.7□□□□□ -1.66
CDC42EP3-202ENST00000422687 DIRC3C9JPN6 131 aa4.7□□□□□ -1.66
CDC42EP3-202ENST00000422687 E7ENQ6 273 aa4.7□□□□□ -1.66
CDC42EP3-202ENST00000422687 TULP2O00295 520 aa4.7□□□□□ -1.66
CDC42EP3-202ENST00000422687 FCHO1O14526 889 aa4.7□□□□□ -1.66
CDC42EP3-202ENST00000422687 XPO1O14980 1071 aaKnown RBP4.7□□□□□ -1.66
CDC42EP3-202ENST00000422687 SLC7A4O43246 635 aa4.7□□□□□ -1.66
CDC42EP3-202ENST00000422687 ACSL4O60488 711 aa4.7□□□□□ -1.66
CDC42EP3-202ENST00000422687 MAGEC1O60732 1142 aa4.7□□□□□ -1.66
CDC42EP3-202ENST00000422687 TBL1XO60907 577 aa4.7□□□□□ -1.66
CDC42EP3-202ENST00000422687 RNASEH1O60930 286 aaKnown RBP4.7□□□□□ -1.66
CDC42EP3-202ENST00000422687 PPP6R2O75170 966 aa4.7□□□□□ -1.66
CDC42EP3-202ENST00000422687 RNASEH2AO75792 299 aaKnown RBP4.7□□□□□ -1.66
CDC42EP3-202ENST00000422687 NR3C1P04150 777 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms