RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 KLHL33A6NCF5 533 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 GOLGA8JA6NMD2 632 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 SLC31A1O15431 190 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 SLC7A4O43246 635 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 AQP9O43315 295 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 HNRNPRO43390 633 aaKnown RBP4.94□□□□□ -1.62
SFXN1-202ENST00000421887 PFKFB2O60825 505 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 ENDOD1O94919 500 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 KIF20AO95235 890 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 FAM200BP0CF97 657 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 GIMD1P0DJR0 217 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 FDPSP14324 419 aaKnown RBP4.94□□□□□ -1.62
SFXN1-202ENST00000421887 TNNI1P19237 187 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 ITIH1P19827 911 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 LPOP22079 712 aaPredicted RBP4.94□□□□□ -1.62
SFXN1-202ENST00000421887 HOXD9P28356 352 aaPredicted RBP4.94□□□□□ -1.62
SFXN1-202ENST00000421887 DDIT3P35638 169 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 PGFP49763 221 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 ANXA11P50995 505 aaKnown RBP4.94□□□□□ -1.62
SFXN1-202ENST00000421887 NEK3P51956 506 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 MC2RQ01718 297 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 GBX1Q14549 363 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 ELAVL3Q14576 367 aaKnown RBP4.94□□□□□ -1.62
SFXN1-202ENST00000421887 ANKRD1Q15327 319 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 COBLL1Q53SF7 1204 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 ZNF542PQ5EBM4 170 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 PLAC9Q5JTB6 97 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 C10orf62Q5T681 223 aaPredicted RBP4.94□□□□□ -1.62
SFXN1-202ENST00000421887 FAM46CQ5VWP2 391 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 EPM2AIP1Q7L775 607 aaPredicted RBP4.94□□□□□ -1.62
SFXN1-202ENST00000421887 TIPARPQ7Z3E1 657 aaKnown RBP4.94□□□□□ -1.62
SFXN1-202ENST00000421887 PTAR1Q7Z6K3 402 aaPredicted RBP4.94□□□□□ -1.62
SFXN1-202ENST00000421887 TRIM69Q86WT6 500 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 GPD1LQ8N335 351 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 AADATQ8N5Z0 425 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 NANOGP1Q8N7R0 232 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 ZNF548Q8NEK5 533 aaPredicted RBP4.94□□□□□ -1.62
SFXN1-202ENST00000421887 PRSS3P2Q8NHM4 247 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 LMX1AQ8TE12 382 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 APOBEC4Q8WW27 367 aaKnown RBP4.94□□□□□ -1.62
SFXN1-202ENST00000421887 RFKQ969G6 155 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 TTC17Q96AE7 1141 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 KIAA1143Q96AT1 154 aaPredicted RBP4.94□□□□□ -1.62
SFXN1-202ENST00000421887 HVCN1Q96D96 273 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 P2RY11Q96G91 374 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 CALML4Q96GE6 196 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 PPP1R13BQ96KQ4 1090 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 ACCSQ96QU6 501 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 TMEM79Q9BSE2 394 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 INTS2Q9H0H0 1204 aaKnown RBP4.94□□□□□ -1.62
SFXN1-202ENST00000421887 FOXP1Q9H334 677 aaPredicted RBP4.94□□□□□ -1.62
SFXN1-202ENST00000421887 MRPL44Q9H9J2 332 aaKnown RBP4.94□□□□□ -1.62
SFXN1-202ENST00000421887 OSER1Q9NX31 292 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 SCOCQ9UIL1 159 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 CA5BQ9Y2D0 317 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 LOXL2Q9Y4K0 774 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 CSNK1G3Q9Y6M4 447 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 U3KQA8 63 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 TRPM6Q9BX84 2022 aa4.94□□□□□ -1.62
SFXN1-202ENST00000421887 ZNF233A6NK53 670 aa4.93□□□□□ -1.62
SFXN1-202ENST00000421887 A6NNZ2 444 aa4.93□□□□□ -1.62
SFXN1-202ENST00000421887 HMGB1P1B2RPK0 211 aaPredicted RBP4.93□□□□□ -1.62
SFXN1-202ENST00000421887 D6RAR5 112 aa4.93□□□□□ -1.62
SFXN1-202ENST00000421887 MKRN2OSH3BPM6 223 aa4.93□□□□□ -1.62
SFXN1-202ENST00000421887 SOCS2O14508 198 aa4.93□□□□□ -1.62
SFXN1-202ENST00000421887 TPP1O14773 563 aa4.93□□□□□ -1.62
SFXN1-202ENST00000421887 PLRG1O43660 514 aaKnown RBP4.93□□□□□ -1.62
SFXN1-202ENST00000421887 BEST1O76090 585 aa4.93□□□□□ -1.62
SFXN1-202ENST00000421887 SUN1O94901 812 aa4.93□□□□□ -1.62
SFXN1-202ENST00000421887 HAUS5O94927 633 aa4.93□□□□□ -1.62
SFXN1-202ENST00000421887 CTDNEP1O95476 244 aa4.93□□□□□ -1.62
SFXN1-202ENST00000421887 CLDN1O95832 211 aa4.93□□□□□ -1.62
SFXN1-202ENST00000421887 RPLP0P05388 317 aaKnown RBP4.93□□□□□ -1.62
SFXN1-202ENST00000421887 ANXA6P08133 673 aa4.93□□□□□ -1.62
SFXN1-202ENST00000421887 SRPRAP08240 638 aaKnown RBP4.93□□□□□ -1.62
SFXN1-202ENST00000421887 DLATP10515 647 aaKnown RBP4.93□□□□□ -1.62
SFXN1-202ENST00000421887 PRLRP16471 622 aa4.93□□□□□ -1.62
SFXN1-202ENST00000421887 ZNF18P17022 549 aa4.93□□□□□ -1.62
SFXN1-202ENST00000421887 NDUFB7P17568 137 aa4.93□□□□□ -1.62
SFXN1-202ENST00000421887 ENPP1P22413 925 aa4.93□□□□□ -1.62
SFXN1-202ENST00000421887 HNRNPA2B1P22626 353 aaKnown RBP4.93□□□□□ -1.62
SFXN1-202ENST00000421887 PRPHP41219 470 aa4.93□□□□□ -1.62
SFXN1-202ENST00000421887 ZNF131P52739 623 aa4.93□□□□□ -1.62
SFXN1-202ENST00000421887 PDX1P52945 283 aa4.93□□□□□ -1.62
SFXN1-202ENST00000421887 PPP3CAQ08209 521 aa4.93□□□□□ -1.62
SFXN1-202ENST00000421887 CDH18Q13634 790 aa4.93□□□□□ -1.62
SFXN1-202ENST00000421887 GRM3Q14832 879 aa4.93□□□□□ -1.62
SFXN1-202ENST00000421887 DRAP1Q14919 205 aaPredicted RBP4.93□□□□□ -1.62
SFXN1-202ENST00000421887 ODF1Q14990 250 aa4.93□□□□□ -1.62
SFXN1-202ENST00000421887 DCAF6Q58WW2 860 aa4.93□□□□□ -1.62
SFXN1-202ENST00000421887 HYIQ5T013 277 aa4.93□□□□□ -1.62
SFXN1-202ENST00000421887 C9orf64Q5T6V5 341 aa4.93□□□□□ -1.62
SFXN1-202ENST00000421887 NUGGCQ68CJ6 796 aa4.93□□□□□ -1.62
SFXN1-202ENST00000421887 Q6ZSR6 202 aa4.93□□□□□ -1.62
SFXN1-202ENST00000421887 USP43Q70EL4 1123 aa4.93□□□□□ -1.62
SFXN1-202ENST00000421887 ZNF720Q7Z2F6 126 aa4.93□□□□□ -1.62
SFXN1-202ENST00000421887 IRF2BP2Q7Z5L9 587 aa4.93□□□□□ -1.62
SFXN1-202ENST00000421887 ACOT1Q86TX2 421 aa4.93□□□□□ -1.62
SFXN1-202ENST00000421887 PARGQ86W56 976 aa4.93□□□□□ -1.62
SFXN1-202ENST00000421887 WDR49Q8IV35 697 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms