RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 TDRPQ86YL5 185 aa15.41■□□□□ 0.06
DDX55-203ENST00000421670 VRK3Q8IV63 474 aa15.41■□□□□ 0.06
DDX55-203ENST00000421670 ZBTB2Q8N680 514 aa15.41■□□□□ 0.06
DDX55-203ENST00000421670 RXFP3Q9NSD7 469 aa15.41■□□□□ 0.06
DDX55-203ENST00000421670 SPASTQ9UBP0 616 aa15.41■□□□□ 0.06
DDX55-203ENST00000421670 PSMD13Q9UNM6 376 aa15.41■□□□□ 0.06
DDX55-203ENST00000421670 DNMT3AQ9Y6K1 912 aaPredicted RBP15.41■□□□□ 0.06
DDX55-203ENST00000421670 GOLGA4Q13439 2230 aaKnown RBP15.41■□□□□ 0.06
DDX55-203ENST00000421670 C17orf113A0A1B0GUU1 675 aa15.41■□□□□ 0.06
DDX55-203ENST00000421670 PRR19A6NJB7 356 aa15.41■□□□□ 0.06
DDX55-203ENST00000421670 FOXO6A8MYZ6 492 aa15.41■□□□□ 0.06
DDX55-203ENST00000421670 TPP1O14773 563 aa15.41■□□□□ 0.06
DDX55-203ENST00000421670 SNX2O60749 519 aa15.41■□□□□ 0.06
DDX55-203ENST00000421670 KRT37O76014 449 aa15.41■□□□□ 0.06
DDX55-203ENST00000421670 EML2O95834 649 aa15.41■□□□□ 0.06
DDX55-203ENST00000421670 ALDOAP04075 364 aaKnown RBP15.41■□□□□ 0.06
DDX55-203ENST00000421670 CNTFP26441 200 aa15.41■□□□□ 0.06
DDX55-203ENST00000421670 GMPRP36959 345 aa15.41■□□□□ 0.06
DDX55-203ENST00000421670 CCT8P50990 548 aa15.41■□□□□ 0.06
DDX55-203ENST00000421670 ATXN3P54252 364 aaPredicted RBP15.41■□□□□ 0.06
DDX55-203ENST00000421670 SLC12A2P55011 1212 aa15.41■□□□□ 0.06
DDX55-203ENST00000421670 ELOCQ15369 112 aa15.41■□□□□ 0.06
DDX55-203ENST00000421670 KRT71Q3SY84 523 aa15.41■□□□□ 0.06
DDX55-203ENST00000421670 TAF8Q7Z7C8 310 aa15.41■□□□□ 0.06
DDX55-203ENST00000421670 GATAD2AQ86YP4 633 aa15.41■□□□□ 0.06
DDX55-203ENST00000421670 CPNE9Q8IYJ1 553 aa15.41■□□□□ 0.06
DDX55-203ENST00000421670 CYP4X1Q8N118 509 aa15.41■□□□□ 0.06
DDX55-203ENST00000421670 ANKRD7Q92527 254 aa15.41■□□□□ 0.06
DDX55-203ENST00000421670 GSDMCQ9BYG8 508 aa15.41■□□□□ 0.06
DDX55-203ENST00000421670 PPCSQ9HAB8 311 aa15.41■□□□□ 0.06
DDX55-203ENST00000421670 SNX15Q9NRS6 342 aa15.41■□□□□ 0.06
DDX55-203ENST00000421670 TBC1D29Q9UFV1 150 aa15.41■□□□□ 0.06
DDX55-203ENST00000421670 CDYLQ9Y232 598 aa15.41■□□□□ 0.06
DDX55-203ENST00000421670 GVINP1Q7Z2Y8 2422 aa15.4■□□□□ 0.06
DDX55-203ENST00000421670 IQANK1A0A1B0GTG1 560 aa15.4■□□□□ 0.06
DDX55-203ENST00000421670 SLC5A10A0PJK1 596 aa15.4■□□□□ 0.06
DDX55-203ENST00000421670 LIN7AO14910 233 aaPredicted RBP15.4■□□□□ 0.06
DDX55-203ENST00000421670 FFAR2O15552 330 aa15.4■□□□□ 0.06
DDX55-203ENST00000421670 APOA4P06727 396 aa15.4■□□□□ 0.06
DDX55-203ENST00000421670 SNRPAP09012 282 aaKnown RBP15.4■□□□□ 0.06
DDX55-203ENST00000421670 GSTM1P09488 218 aa15.4■□□□□ 0.06
DDX55-203ENST00000421670 STMN1P16949 149 aa15.4■□□□□ 0.06
DDX55-203ENST00000421670 PDHA2P29803 388 aa15.4■□□□□ 0.06
DDX55-203ENST00000421670 SERPINB8P50452 374 aa15.4■□□□□ 0.06
DDX55-203ENST00000421670 GSTM4Q03013 218 aa15.4■□□□□ 0.06
DDX55-203ENST00000421670 ILF2Q12905 390 aaKnown RBP15.4■□□□□ 0.06
DDX55-203ENST00000421670 ZKSCAN8Q15776 578 aaPredicted RBP15.4■□□□□ 0.06
DDX55-203ENST00000421670 CSRP2Q16527 193 aa15.4■□□□□ 0.06
DDX55-203ENST00000421670 DEFB133Q30KQ1 61 aa15.4■□□□□ 0.06
DDX55-203ENST00000421670 ACSBG2Q5FVE4 666 aa15.4■□□□□ 0.06
DDX55-203ENST00000421670 CEP85LQ5SZL2 805 aa15.4■□□□□ 0.06
DDX55-203ENST00000421670 METRNLQ641Q3 311 aa15.4■□□□□ 0.06
DDX55-203ENST00000421670 PAQR3Q6TCH7 311 aa15.4■□□□□ 0.06
DDX55-203ENST00000421670 ASCL5Q7RTU5 278 aa15.4■□□□□ 0.06
DDX55-203ENST00000421670 SFTPA2Q8IWL1 248 aa15.4■□□□□ 0.06
DDX55-203ENST00000421670 SLC25A45Q8N413 288 aa15.4■□□□□ 0.06
DDX55-203ENST00000421670 FSTL5Q8N475 847 aaPredicted RBP15.4■□□□□ 0.06
DDX55-203ENST00000421670 MZB1Q8WU39 189 aa15.4■□□□□ 0.06
DDX55-203ENST00000421670 ASZ1Q8WWH4 475 aa15.4■□□□□ 0.06
DDX55-203ENST00000421670 TMEM159Q96B96 161 aa15.4■□□□□ 0.06
DDX55-203ENST00000421670 PRDM8Q9NQV8 689 aa15.4■□□□□ 0.06
DDX55-203ENST00000421670 TAAR2Q9P1P5 351 aa15.4■□□□□ 0.06
DDX55-203ENST00000421670 DHRS7Q9Y394 339 aa15.4■□□□□ 0.06
DDX55-203ENST00000421670 ASCC3Q8N3C0 2202 aaKnown RBP15.4■□□□□ 0.06
DDX55-203ENST00000421670 CFAP54Q96N23 3096 aa15.39■□□□□ 0.05
DDX55-203ENST00000421670 KLHL33A6NCF5 533 aa15.39■□□□□ 0.05
DDX55-203ENST00000421670 PDZK1P1A8MUH7 402 aa15.39■□□□□ 0.05
DDX55-203ENST00000421670 DFNA5O60443 496 aa15.39■□□□□ 0.05
DDX55-203ENST00000421670 LRP3O75074 770 aa15.39■□□□□ 0.05
DDX55-203ENST00000421670 GPC4O75487 556 aa15.39■□□□□ 0.05
DDX55-203ENST00000421670 ZNF37AP17032 561 aaPredicted RBP15.39■□□□□ 0.05
DDX55-203ENST00000421670 CD9P21926 228 aa15.39■□□□□ 0.05
DDX55-203ENST00000421670 CLCNKAP51800 687 aa15.39■□□□□ 0.05
DDX55-203ENST00000421670 RAB10P61026 200 aa15.39■□□□□ 0.05
DDX55-203ENST00000421670 UGT3A1Q6NUS8 523 aa15.39■□□□□ 0.05
DDX55-203ENST00000421670 TMEM207Q6UWW9 146 aa15.39■□□□□ 0.05
DDX55-203ENST00000421670 LRIG3Q6UXM1 1119 aa15.39■□□□□ 0.05
DDX55-203ENST00000421670 RAPH1Q70E73 1250 aa15.39■□□□□ 0.05
DDX55-203ENST00000421670 HDXQ7Z353 690 aa15.39■□□□□ 0.05
DDX55-203ENST00000421670 KANSL1Q7Z3B3 1105 aa15.39■□□□□ 0.05
DDX55-203ENST00000421670 GKN2Q86XP6 184 aa15.39■□□□□ 0.05
DDX55-203ENST00000421670 SPDYE1Q8NFV5 336 aaPredicted RBP15.39■□□□□ 0.05
DDX55-203ENST00000421670 SAP25Q8TEE9 199 aa15.39■□□□□ 0.05
DDX55-203ENST00000421670 INPP5DQ92835 1189 aa15.39■□□□□ 0.05
DDX55-203ENST00000421670 TSPAN17Q96FV3 270 aa15.39■□□□□ 0.05
DDX55-203ENST00000421670 EDEM2Q9BV94 578 aa15.39■□□□□ 0.05
DDX55-203ENST00000421670 TMEM109Q9BVC6 243 aa15.39■□□□□ 0.05
DDX55-203ENST00000421670 ROPN1BQ9BZX4 212 aaPredicted RBP15.39■□□□□ 0.05
DDX55-203ENST00000421670 WWP1Q9H0M0 922 aa15.39■□□□□ 0.05
DDX55-203ENST00000421670 ROPN1Q9HAT0 212 aaPredicted RBP15.39■□□□□ 0.05
DDX55-203ENST00000421670 GPAMQ9HCL2 828 aa15.39■□□□□ 0.05
DDX55-203ENST00000421670 LATS2Q9NRM7 1088 aa15.39■□□□□ 0.05
DDX55-203ENST00000421670 DOLKQ9UPQ8 538 aa15.39■□□□□ 0.05
DDX55-203ENST00000421670 RUVBL2Q9Y230 463 aaKnown RBP15.39■□□□□ 0.05
DDX55-203ENST00000421670 WDR37Q9Y2I8 494 aa15.39■□□□□ 0.05
DDX55-203ENST00000421670 B4DGG1 531 aa15.38■□□□□ 0.05
DDX55-203ENST00000421670 LMO7DNF2Z398 122 aa15.38■□□□□ 0.05
DDX55-203ENST00000421670 KPNA5O15131 536 aa15.38■□□□□ 0.05
DDX55-203ENST00000421670 YY2O15391 372 aa15.38■□□□□ 0.05
DDX55-203ENST00000421670 SLC35G4P0C7Q5 338 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms