RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 SPATA22Q8NHS9 363 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 PSMG2Q969U7 264 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 B3GALT6Q96L58 329 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 TRMOQ9BU70 441 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 TRMT61BQ9BVS5 477 aaKnown RBP11.08□□□□□ -0.64
PTCH1-205ENST00000418258 TPK1Q9H3S4 243 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 CARS2Q9HA77 564 aaKnown RBP11.08□□□□□ -0.64
PTCH1-205ENST00000418258 INSL6Q9Y581 213 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 ZNF726A6NNF4 738 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 A8MUA0 341 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 TTKP33981 857 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 NSG1P42857 185 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 ADARP55265 1226 aaKnown RBP11.08□□□□□ -0.64
PTCH1-205ENST00000418258 OLR1P78380 273 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 CRHR2Q13324 411 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 RGS21Q2M5E4 152 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 CLEC6AQ6EIG7 209 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 RNF19BQ6ZMZ0 732 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 ANKFN1Q8N957 763 aa11.08□□□□□ -0.64
PTCH1-205ENST00000418258 A0A1W2PRG6 482 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 CHP2O43745 196 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 NOS1APO75052 506 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-205ENST00000418258 OGNP20774 298 aaKnown RBP11.07□□□□□ -0.64
PTCH1-205ENST00000418258 CPN2P22792 545 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 CCR8P51685 355 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 SP140Q13342 867 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 AUHQ13825 339 aaKnown RBP11.07□□□□□ -0.64
PTCH1-205ENST00000418258 GPR107Q5VW38 600 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 AZIN2Q96A70 460 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 PCDHGB5Q9Y5G0 923 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 GNB5O14775 395 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 GSC2O15499 205 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 MPSTP25325 297 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 TRAP1Q12931 704 aaKnown RBP11.07□□□□□ -0.64
PTCH1-205ENST00000418258 CHAF1BQ13112 559 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 CHIT1Q13231 466 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 Q8N9G6 341 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-205ENST00000418258 SIDT2Q8NBJ9 832 aaKnown RBP11.07□□□□□ -0.64
PTCH1-205ENST00000418258 RFKQ969G6 155 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 TBL1XR1Q9BZK7 514 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 RCOR3Q9P2K3 495 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-205ENST00000418258 MYH4Q9Y623 1939 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 HYKKA2RU49 373 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 DHX15O43143 795 aaKnown RBP11.07□□□□□ -0.64
PTCH1-205ENST00000418258 PEX10O60683 326 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 FAM155BO75949 473 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 FABP3P05413 133 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 UROSP10746 265 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 AP1S1P61966 158 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 UBAP2Q5T6F2 1119 aaKnown RBP11.07□□□□□ -0.64
PTCH1-205ENST00000418258 RNF43Q68DV7 783 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 TATDN1Q6P1N9 297 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 EIF1ADQ8N9N8 165 aaKnown RBP11.07□□□□□ -0.64
PTCH1-205ENST00000418258 TMEM145Q8NBT3 493 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 NLGN2Q8NFZ4 835 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 DQX1Q8TE96 717 aaKnown RBP11.07□□□□□ -0.64
PTCH1-205ENST00000418258 CAPSLQ8WWF8 208 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 OSBPL11Q9BXB4 747 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 ANKHQ9HCJ1 492 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.07□□□□□ -0.64
PTCH1-205ENST00000418258 TNFRSF11BO00300 401 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 AP2A1O95782 977 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 CSTF2P33240 577 aaKnown RBP eCLIP11.07□□□□□ -0.64
PTCH1-205ENST00000418258 ELOAQ14241 798 aaKnown RBP11.07□□□□□ -0.64
PTCH1-205ENST00000418258 PERM1Q5SV97 790 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 OR5M3Q8NGP4 307 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 SH3RF2Q8TEC5 729 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 OVCA2Q8WZ82 227 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 COQ8BQ96D53 544 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 SNX27Q96L92 541 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 LPIN3Q9BQK8 851 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 POLR3BQ9NW08 1133 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-205ENST00000418258 SNX7Q9UNH6 387 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 STXBP5LQ9Y2K9 1186 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 PAPSS2O95340 614 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-205ENST00000418258 C4BPAP04003 597 aaKnown RBP11.07□□□□□ -0.64
PTCH1-205ENST00000418258 KLK3P07288 261 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-205ENST00000418258 IGFBP5P24593 272 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 CSKP41240 450 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 PDK3Q15120 406 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 SWI5Q1ZZU3 235 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 SLC9B1Q4ZJI4 515 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 ARSHQ5FYA8 562 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 ERICH5Q6P6B1 374 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 TBC1D21Q8IYX1 336 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 PRELID2Q8N945 189 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 DBF4BQ8NFT6 615 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 C11orf24Q96F05 449 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-205ENST00000418258 SLC25A51Q9H1U9 297 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 TEX46H3BTG2 121 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 DDX3YO15523 660 aaKnown RBP11.07□□□□□ -0.64
PTCH1-205ENST00000418258 CCL5P13501 91 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 TM4SF1P30408 202 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 MPIP34949 423 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 GHRHRQ02643 423 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 IL23RQ5VWK5 629 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 SFRP1Q8N474 314 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 PRICKLE1Q96MT3 831 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-205ENST00000418258 OR2AG1Q9H205 316 aa11.07□□□□□ -0.64
PTCH1-205ENST00000418258 WDR26Q9H7D7 661 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms