RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 NUS1Q96E22 293 aa16.49■□□□□ 0.23
SSBP3-205ENST00000417664 MSLNLQ96KJ4 702 aa16.49■□□□□ 0.23
SSBP3-205ENST00000417664 WRAP53Q9BUR4 548 aaKnown RBP16.49■□□□□ 0.23
SSBP3-205ENST00000417664 CD244Q9BZW8 370 aa16.49■□□□□ 0.23
SSBP3-205ENST00000417664 PARVBQ9HBI1 364 aa16.49■□□□□ 0.23
SSBP3-205ENST00000417664 ADAMTS6Q9UKP5 1117 aa16.49■□□□□ 0.23
SSBP3-205ENST00000417664 HCN2Q9UL51 889 aa16.49■□□□□ 0.23
SSBP3-205ENST00000417664 ITM2BQ9Y287 266 aa16.49■□□□□ 0.23
SSBP3-205ENST00000417664 STON1Q9Y6Q2 735 aa16.49■□□□□ 0.23
SSBP3-205ENST00000417664 LOC100653049A0A140TA62 436 aa16.48■□□□□ 0.23
SSBP3-205ENST00000417664 GFYI3L273 518 aa16.48■□□□□ 0.23
SSBP3-205ENST00000417664 PIP5K1BO14986 540 aa16.48■□□□□ 0.23
SSBP3-205ENST00000417664 AP1G1O43747 822 aa16.48■□□□□ 0.23
SSBP3-205ENST00000417664 SGTAO43765 313 aa16.48■□□□□ 0.23
SSBP3-205ENST00000417664 KRT34O76011 436 aa16.48■□□□□ 0.23
SSBP3-205ENST00000417664 RECQL5O94762 991 aaPredicted RBP16.48■□□□□ 0.23
SSBP3-205ENST00000417664 LMNAP02545 664 aaKnown RBP16.48■□□□□ 0.23
SSBP3-205ENST00000417664 HIST1H2AGP0C0S8 130 aaPredicted RBP16.48■□□□□ 0.23
SSBP3-205ENST00000417664 C6P13671 934 aa16.48■□□□□ 0.23
SSBP3-205ENST00000417664 HIST1H2ADP20671 130 aa16.48■□□□□ 0.23
SSBP3-205ENST00000417664 GGT5P36269 586 aa16.48■□□□□ 0.23
SSBP3-205ENST00000417664 RPIAP49247 311 aa16.48■□□□□ 0.23
SSBP3-205ENST00000417664 ACADVLP49748 655 aa16.48■□□□□ 0.23
SSBP3-205ENST00000417664 AP1S2P56377 157 aa16.48■□□□□ 0.23
SSBP3-205ENST00000417664 TMEM115Q12893 351 aaPredicted RBP16.48■□□□□ 0.23
SSBP3-205ENST00000417664 CAMK2GQ13555 558 aaPredicted RBP16.48■□□□□ 0.23
SSBP3-205ENST00000417664 PHKG1Q16816 387 aa16.48■□□□□ 0.23
SSBP3-205ENST00000417664 NAIF1Q69YI7 327 aaPredicted RBP16.48■□□□□ 0.23
SSBP3-205ENST00000417664 OGFOD2Q6N063 350 aa16.48■□□□□ 0.23
SSBP3-205ENST00000417664 DET1Q7L5Y6 550 aa16.48■□□□□ 0.23
SSBP3-205ENST00000417664 GOLGA7Q7Z5G4 137 aa16.48■□□□□ 0.23
SSBP3-205ENST00000417664 SCUBE1Q8IWY4 988 aa16.48■□□□□ 0.23
SSBP3-205ENST00000417664 CSGALNACT1Q8TDX6 532 aa16.48■□□□□ 0.23
SSBP3-205ENST00000417664 CXorf40AQ8TE69 158 aa16.48■□□□□ 0.23
SSBP3-205ENST00000417664 NAT14Q8WUY8 206 aa16.48■□□□□ 0.23
SSBP3-205ENST00000417664 ELMO1Q92556 727 aa16.48■□□□□ 0.23
SSBP3-205ENST00000417664 DLG3Q92796 817 aa16.48■□□□□ 0.23
SSBP3-205ENST00000417664 ZNF514Q96K75 400 aaPredicted RBP16.48■□□□□ 0.23
SSBP3-205ENST00000417664 HIST1H2AHQ96KK5 128 aa16.48■□□□□ 0.23
SSBP3-205ENST00000417664 HIST1H2AJQ99878 128 aa16.48■□□□□ 0.23
SSBP3-205ENST00000417664 H2AFJQ9BTM1 129 aa16.48■□□□□ 0.23
SSBP3-205ENST00000417664 CLDND1Q9NY35 253 aa16.48■□□□□ 0.23
SSBP3-205ENST00000417664 CACNA2D2Q9NY47 1150 aa16.48■□□□□ 0.23
SSBP3-205ENST00000417664 WWOXQ9NZC7 414 aa16.48■□□□□ 0.23
SSBP3-205ENST00000417664 OPTCQ9UBM4 332 aa16.48■□□□□ 0.23
SSBP3-205ENST00000417664 LAMA3Q16787 3333 aa16.48■□□□□ 0.23
SSBP3-205ENST00000417664 CDH23Q9H251 3354 aa16.47■□□□□ 0.23
SSBP3-205ENST00000417664 K7EPI3 171 aa16.47■□□□□ 0.23
SSBP3-205ENST00000417664 LZTS3O60299 673 aaPredicted RBP16.47■□□□□ 0.23
SSBP3-205ENST00000417664 GUCA1CO95843 209 aa16.47■□□□□ 0.23
SSBP3-205ENST00000417664 ADH1BP00325 375 aa16.47■□□□□ 0.23
SSBP3-205ENST00000417664 LBPP18428 481 aa16.47■□□□□ 0.23
SSBP3-205ENST00000417664 CYP2A7P20853 494 aa16.47■□□□□ 0.23
SSBP3-205ENST00000417664 CCND1P24385 295 aa16.47■□□□□ 0.23
SSBP3-205ENST00000417664 P2RY2P41231 377 aa16.47■□□□□ 0.23
SSBP3-205ENST00000417664 CCR3P51677 355 aa16.47■□□□□ 0.23
SSBP3-205ENST00000417664 METAP1P53582 386 aa16.47■□□□□ 0.23
SSBP3-205ENST00000417664 FOXA1P55317 472 aa16.47■□□□□ 0.23
SSBP3-205ENST00000417664 STX1BP61266 288 aa16.47■□□□□ 0.23
SSBP3-205ENST00000417664 DLX2Q07687 328 aaPredicted RBP16.47■□□□□ 0.23
SSBP3-205ENST00000417664 COL19A1Q14993 1142 aa16.47■□□□□ 0.23
SSBP3-205ENST00000417664 C6orf163Q5TEZ5 329 aa16.47■□□□□ 0.23
SSBP3-205ENST00000417664 RNF165Q6ZSG1 346 aa16.47■□□□□ 0.23
SSBP3-205ENST00000417664 UBE2R2Q712K3 238 aaPredicted RBP16.47■□□□□ 0.23
SSBP3-205ENST00000417664 SNX32Q86XE0 403 aa16.47■□□□□ 0.23
SSBP3-205ENST00000417664 DDIASQ8IXT1 998 aa16.47■□□□□ 0.23
SSBP3-205ENST00000417664 CFAP61Q8NHU2 1237 aa16.47■□□□□ 0.23
SSBP3-205ENST00000417664 FBXO27Q8NI29 283 aa16.47■□□□□ 0.23
SSBP3-205ENST00000417664 KCNV2Q8TDN2 545 aa16.47■□□□□ 0.23
SSBP3-205ENST00000417664 CCM2Q9BSQ5 444 aa16.47■□□□□ 0.23
SSBP3-205ENST00000417664 THTPAQ9BU02 230 aa16.47■□□□□ 0.23
SSBP3-205ENST00000417664 RSPH9Q9H1X1 276 aaPredicted RBP16.47■□□□□ 0.23
SSBP3-205ENST00000417664 NOL11Q9H8H0 719 aaKnown RBP16.47■□□□□ 0.23
SSBP3-205ENST00000417664 AKTIPQ9H8T0 292 aa16.47■□□□□ 0.23
SSBP3-205ENST00000417664 EFCAB1Q9HAE3 211 aa16.47■□□□□ 0.23
SSBP3-205ENST00000417664 RIC8BQ9NVN3 520 aa16.47■□□□□ 0.23
SSBP3-205ENST00000417664 ZNF225Q9UK10 706 aa16.47■□□□□ 0.23
SSBP3-205ENST00000417664 FADS3Q9Y5Q0 445 aa16.47■□□□□ 0.23
SSBP3-205ENST00000417664 ANHXE9PGG2 379 aa16.46■□□□□ 0.23
SSBP3-205ENST00000417664 PSMD12O00232 456 aaPredicted RBP16.46■□□□□ 0.23
SSBP3-205ENST00000417664 TAPBPO15533 448 aa16.46■□□□□ 0.23
SSBP3-205ENST00000417664 TSPAN6O43657 245 aa16.46■□□□□ 0.23
SSBP3-205ENST00000417664 MTX2O75431 263 aa16.46■□□□□ 0.23
SSBP3-205ENST00000417664 KATNA1O75449 491 aa16.46■□□□□ 0.23
SSBP3-205ENST00000417664 CIB2O75838 187 aa16.46■□□□□ 0.23
SSBP3-205ENST00000417664 PSMD8P48556 350 aa16.46■□□□□ 0.23
SSBP3-205ENST00000417664 GRIK2Q13002 908 aa16.46■□□□□ 0.23
SSBP3-205ENST00000417664 STX5Q13190 355 aa16.46■□□□□ 0.23
SSBP3-205ENST00000417664 CUL3Q13618 768 aa16.46■□□□□ 0.23
SSBP3-205ENST00000417664 BOP1Q14137 746 aaKnown RBP16.46■□□□□ 0.23
SSBP3-205ENST00000417664 PTK2BQ14289 1009 aa16.46■□□□□ 0.23
SSBP3-205ENST00000417664 GSTA3Q16772 222 aa16.46■□□□□ 0.23
SSBP3-205ENST00000417664 BCL7AQ4VC05 210 aa16.46■□□□□ 0.23
SSBP3-205ENST00000417664 KHDC1Q4VXA5 237 aaKnown RBP16.46■□□□□ 0.23
SSBP3-205ENST00000417664 FBXO48Q5FWF7 155 aa16.46■□□□□ 0.23
SSBP3-205ENST00000417664 C16orf89Q6UX73 402 aa16.46■□□□□ 0.23
SSBP3-205ENST00000417664 SPATA19Q7Z5L4 167 aa16.46■□□□□ 0.23
SSBP3-205ENST00000417664 RASGRP3Q8IV61 690 aa16.46■□□□□ 0.23
SSBP3-205ENST00000417664 CHPFQ8IZ52 775 aa16.46■□□□□ 0.23
SSBP3-205ENST00000417664 ZNF513Q8N8E2 541 aaPredicted RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms