RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 CCNYL3P0C7X3 344 aa24.75■■□□□ 1.55
VEGFA-208ENST00000417285 ITGALP20701 1170 aa24.75■■□□□ 1.55
VEGFA-208ENST00000417285 PBLDP30039 288 aaPredicted RBP24.75■■□□□ 1.55
VEGFA-208ENST00000417285 GSDMDP57764 484 aa24.75■■□□□ 1.55
VEGFA-208ENST00000417285 KCNAB2Q13303 367 aa24.75■■□□□ 1.55
VEGFA-208ENST00000417285 ATG14Q6ZNE5 492 aa24.75■■□□□ 1.55
VEGFA-208ENST00000417285 SNX20Q7Z614 316 aa24.75■■□□□ 1.55
VEGFA-208ENST00000417285 GPR150Q8NGU9 434 aa24.75■■□□□ 1.55
VEGFA-208ENST00000417285 UBE2Q2Q8WVN8 375 aa24.75■■□□□ 1.55
VEGFA-208ENST00000417285 COPS8Q99627 209 aa24.75■■□□□ 1.55
VEGFA-208ENST00000417285 WWP1Q9H0M0 922 aa24.75■■□□□ 1.55
VEGFA-208ENST00000417285 IL17BQ9UHF5 180 aa24.75■■□□□ 1.55
VEGFA-208ENST00000417285 SUV39H1O43463 412 aa24.74■■□□□ 1.55
VEGFA-208ENST00000417285 KRT86O43790 486 aa24.74■■□□□ 1.55
VEGFA-208ENST00000417285 SPAG6O75602 509 aa24.74■■□□□ 1.55
VEGFA-208ENST00000417285 ZIC2O95409 532 aaPredicted RBP24.74■■□□□ 1.55
VEGFA-208ENST00000417285 SLC35G4P0C7Q5 338 aa24.74■■□□□ 1.55
VEGFA-208ENST00000417285 TCN2P20062 427 aa24.74■■□□□ 1.55
VEGFA-208ENST00000417285 POLE2P56282 527 aa24.74■■□□□ 1.55
VEGFA-208ENST00000417285 CDC20Q12834 499 aa24.74■■□□□ 1.55
VEGFA-208ENST00000417285 SPARCL1Q14515 664 aa24.74■■□□□ 1.55
VEGFA-208ENST00000417285 P3H1Q32P28 736 aa24.74■■□□□ 1.55
VEGFA-208ENST00000417285 NXPE1Q8N323 547 aa24.74■■□□□ 1.55
VEGFA-208ENST00000417285 SIDT2Q8NBJ9 832 aaKnown RBP24.74■■□□□ 1.55
VEGFA-208ENST00000417285 OR13C4Q8NGS5 318 aa24.74■■□□□ 1.55
VEGFA-208ENST00000417285 SLC35B2Q8TB61 432 aa24.74■■□□□ 1.55
VEGFA-208ENST00000417285 STARD8Q92502 1023 aa24.74■■□□□ 1.55
VEGFA-208ENST00000417285 STAMBPL1Q96FJ0 436 aa24.74■■□□□ 1.55
VEGFA-208ENST00000417285 C12orf66Q96MD2 445 aa24.74■■□□□ 1.55
VEGFA-208ENST00000417285 LRRC40Q9H9A6 602 aa24.74■■□□□ 1.55
VEGFA-208ENST00000417285 HRASLS2Q9NWW9 162 aa24.74■■□□□ 1.55
VEGFA-208ENST00000417285 KCND3Q9UK17 655 aa24.74■■□□□ 1.55
VEGFA-208ENST00000417285 PADI1Q9ULC6 663 aa24.74■■□□□ 1.55
VEGFA-208ENST00000417285 R3HDM2Q9Y2K5 976 aaKnown RBP24.74■■□□□ 1.55
VEGFA-208ENST00000417285 PCDHB3Q9Y5E6 796 aa24.74■■□□□ 1.55
VEGFA-208ENST00000417285 HEBP2Q9Y5Z4 205 aa24.74■■□□□ 1.55
VEGFA-208ENST00000417285 IGHV5-51A0A0C4DH38 117 aa24.73■■□□□ 1.55
VEGFA-208ENST00000417285 C17orf113A0A1B0GUU1 675 aa24.73■■□□□ 1.55
VEGFA-208ENST00000417285 PSMD3O43242 534 aa24.73■■□□□ 1.55
VEGFA-208ENST00000417285 KIAA0754O94854 1291 aa24.73■■□□□ 1.55
VEGFA-208ENST00000417285 ATP1B2P14415 290 aaPredicted RBP24.73■■□□□ 1.55
VEGFA-208ENST00000417285 ZNF28P17035 718 aa24.73■■□□□ 1.55
VEGFA-208ENST00000417285 NDUFS1P28331 727 aa24.73■■□□□ 1.55
VEGFA-208ENST00000417285 ARL4DP49703 201 aa24.73■■□□□ 1.55
VEGFA-208ENST00000417285 ZNF140P52738 457 aaPredicted RBP24.73■■□□□ 1.55
VEGFA-208ENST00000417285 ACY1Q03154 408 aa24.73■■□□□ 1.55
VEGFA-208ENST00000417285 KCNC4Q03721 635 aa24.73■■□□□ 1.55
VEGFA-208ENST00000417285 GSE1Q14687 1217 aa24.73■■□□□ 1.55
VEGFA-208ENST00000417285 SEL1L2Q5TEA6 688 aa24.73■■□□□ 1.55
VEGFA-208ENST00000417285 CFAP206Q8IYR0 622 aa24.73■■□□□ 1.55
VEGFA-208ENST00000417285 CARFQ8N187 725 aa24.73■■□□□ 1.55
VEGFA-208ENST00000417285 GALNT6Q8NCL4 622 aa24.73■■□□□ 1.55
VEGFA-208ENST00000417285 APOBEC4Q8WW27 367 aaKnown RBP24.73■■□□□ 1.55
VEGFA-208ENST00000417285 ELMO2Q96JJ3 720 aa24.73■■□□□ 1.55
VEGFA-208ENST00000417285 TMEM121Q9BTD3 319 aa24.73■■□□□ 1.55
VEGFA-208ENST00000417285 RARRES3Q9UL19 164 aa24.73■■□□□ 1.55
VEGFA-208ENST00000417285 UBA6A0AVT1 1052 aaPredicted RBP24.72■■□□□ 1.55
VEGFA-208ENST00000417285 OR5K3A6NET4 321 aa24.72■■□□□ 1.55
VEGFA-208ENST00000417285 LDB2O43679 373 aa24.72■■□□□ 1.55
VEGFA-208ENST00000417285 SGTAO43765 313 aa24.72■■□□□ 1.55
VEGFA-208ENST00000417285 WISP1O95388 367 aa24.72■■□□□ 1.55
VEGFA-208ENST00000417285 PRKAR1AP10644 381 aa24.72■■□□□ 1.55
VEGFA-208ENST00000417285 TMPRSS15P98073 1019 aa24.72■■□□□ 1.55
VEGFA-208ENST00000417285 KRT33BQ14525 404 aa24.72■■□□□ 1.55
VEGFA-208ENST00000417285 DNTTIP2Q5QJE6 756 aaKnown RBP24.72■■□□□ 1.55
VEGFA-208ENST00000417285 KCTD11Q693B1 232 aa24.72■■□□□ 1.55
VEGFA-208ENST00000417285 CAPRIN2Q6IMN6 1127 aaKnown RBP24.72■■□□□ 1.55
VEGFA-208ENST00000417285 ARMC6Q6NXE6 501 aa24.72■■□□□ 1.55
VEGFA-208ENST00000417285 OOSP2Q86WS3 158 aa24.72■■□□□ 1.55
VEGFA-208ENST00000417285 HM13Q8TCT9 377 aa24.72■■□□□ 1.55
VEGFA-208ENST00000417285 KIR3DX1Q9H7L2 352 aa24.72■■□□□ 1.55
VEGFA-208ENST00000417285 SLC24A2Q9UI40 661 aa24.72■■□□□ 1.55
VEGFA-208ENST00000417285 LNPEPQ9UIQ6 1025 aa24.72■■□□□ 1.55
VEGFA-208ENST00000417285 GUCA1BQ9UMX6 200 aa24.72■■□□□ 1.55
VEGFA-208ENST00000417285 CFAP20Q9Y6A4 193 aaKnown RBP24.72■■□□□ 1.55
VEGFA-208ENST00000417285 ZNF106Q9H2Y7 1883 aaKnown RBP24.72■■□□□ 1.55
VEGFA-208ENST00000417285 TCRBV7S2A1N4TA0A589 114 aa24.71■■□□□ 1.55
VEGFA-208ENST00000417285 TLCD2A6NGC4 264 aa24.71■■□□□ 1.55
VEGFA-208ENST00000417285 METTL18O95568 372 aa24.71■■□□□ 1.55
VEGFA-208ENST00000417285 RECKO95980 971 aa24.71■■□□□ 1.55
VEGFA-208ENST00000417285 POLBP06746 335 aa24.71■■□□□ 1.55
VEGFA-208ENST00000417285 DLSTP36957 453 aa24.71■■□□□ 1.55
VEGFA-208ENST00000417285 PRLHRP49683 370 aa24.71■■□□□ 1.55
VEGFA-208ENST00000417285 HSD11B2P80365 405 aa24.71■■□□□ 1.55
VEGFA-208ENST00000417285 TUBB3Q13509 450 aa24.71■■□□□ 1.55
VEGFA-208ENST00000417285 ZNF449Q6P9G9 518 aa24.71■■□□□ 1.55
VEGFA-208ENST00000417285 MAP3K3Q99759 626 aa24.71■■□□□ 1.55
VEGFA-208ENST00000417285 FRMD8P1Q9BZ68 369 aaPredicted RBP24.71■■□□□ 1.55
VEGFA-208ENST00000417285 CLMPQ9H6B4 373 aa24.71■■□□□ 1.55
VEGFA-208ENST00000417285 VPS37BQ9H9H4 285 aa24.71■■□□□ 1.55
VEGFA-208ENST00000417285 ZDHHC3Q9NYG2 299 aa24.71■■□□□ 1.55
VEGFA-208ENST00000417285 H7C0S8 307 aa24.7■■□□□ 1.54
VEGFA-208ENST00000417285 ARHGAP6O43182 974 aa24.7■■□□□ 1.54
VEGFA-208ENST00000417285 FOLR1P15328 257 aa24.7■■□□□ 1.54
VEGFA-208ENST00000417285 GDF10P55107 478 aa24.7■■□□□ 1.54
VEGFA-208ENST00000417285 PPP1CAP62136 330 aa24.7■■□□□ 1.54
VEGFA-208ENST00000417285 DEFB109BQ30KR1 87 aa24.7■■□□□ 1.54
VEGFA-208ENST00000417285 C16orf46Q6P387 395 aa24.7■■□□□ 1.54
VEGFA-208ENST00000417285 SPDYE1Q8NFV5 336 aaPredicted RBP24.7■■□□□ 1.54
VEGFA-208ENST00000417285 FAM96AQ9H5X1 160 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms