RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 ST3GAL2Q16842 350 aa22.61■■□□□ 1.21
SMARCB1-205ENST00000417137 SYTL3Q4VX76 610 aa22.61■■□□□ 1.21
SMARCB1-205ENST00000417137 HSP90AA5PQ58FG0 334 aa22.61■■□□□ 1.21
SMARCB1-205ENST00000417137 CDCP2Q5VXM1 449 aa22.61■■□□□ 1.21
SMARCB1-205ENST00000417137 UNC5AQ6ZN44 842 aa22.61■■□□□ 1.21
SMARCB1-205ENST00000417137 RBM44Q6ZP01 1051 aaKnown RBP22.61■■□□□ 1.21
SMARCB1-205ENST00000417137 ANKMY2Q8IV38 441 aa22.61■■□□□ 1.21
SMARCB1-205ENST00000417137 ZBED8Q8IZ13 594 aa22.61■■□□□ 1.21
SMARCB1-205ENST00000417137 NOA1Q8NC60 698 aaKnown RBP22.61■■□□□ 1.21
SMARCB1-205ENST00000417137 FBXO36Q8NEA4 188 aa22.61■■□□□ 1.21
SMARCB1-205ENST00000417137 PYROXD1Q8WU10 500 aa22.61■■□□□ 1.21
SMARCB1-205ENST00000417137 SEC14L1Q92503 715 aa22.61■■□□□ 1.21
SMARCB1-205ENST00000417137 AHCYL2Q96HN2 611 aaKnown RBP22.61■■□□□ 1.21
SMARCB1-205ENST00000417137 DEPDC7Q96QD5 511 aa22.61■■□□□ 1.21
SMARCB1-205ENST00000417137 PHACTR1Q9C0D0 580 aa22.61■■□□□ 1.21
SMARCB1-205ENST00000417137 PPANQ9NQ55 473 aaKnown RBP22.61■■□□□ 1.21
SMARCB1-205ENST00000417137 FAM114A2Q9NRY5 505 aa22.61■■□□□ 1.21
SMARCB1-205ENST00000417137 WASF3Q9UPY6 502 aa22.61■■□□□ 1.21
SMARCB1-205ENST00000417137 NEUROG3Q9Y4Z2 214 aa22.61■■□□□ 1.21
SMARCB1-205ENST00000417137 HEBP2Q9Y5Z4 205 aa22.61■■□□□ 1.21
SMARCB1-205ENST00000417137 FAM221BA6H8Z2 402 aa22.6■■□□□ 1.21
SMARCB1-205ENST00000417137 OR52A4PA6NMU1 304 aa22.6■■□□□ 1.21
SMARCB1-205ENST00000417137 NTN3O00634 580 aaPredicted RBP22.6■■□□□ 1.21
SMARCB1-205ENST00000417137 B4GAT1O43505 415 aa22.6■■□□□ 1.21
SMARCB1-205ENST00000417137 S1PR4O95977 384 aa22.6■■□□□ 1.21
SMARCB1-205ENST00000417137 FMO4P31512 558 aa22.6■■□□□ 1.21
SMARCB1-205ENST00000417137 CD151P48509 253 aa22.6■■□□□ 1.21
SMARCB1-205ENST00000417137 EPHA4P54764 986 aa22.6■■□□□ 1.21
SMARCB1-205ENST00000417137 OR1D5P58170 312 aa22.6■■□□□ 1.21
SMARCB1-205ENST00000417137 GPLD1P80108 840 aa22.6■■□□□ 1.21
SMARCB1-205ENST00000417137 CTBP1Q13363 440 aa22.6■■□□□ 1.21
SMARCB1-205ENST00000417137 FRG1Q14331 258 aaKnown RBP22.6■■□□□ 1.21
SMARCB1-205ENST00000417137 KRT33BQ14525 404 aa22.6■■□□□ 1.21
SMARCB1-205ENST00000417137 ZNF658BQ4V348 819 aaPredicted RBP22.6■■□□□ 1.21
SMARCB1-205ENST00000417137 STEAP4Q687X5 459 aa22.6■■□□□ 1.21
SMARCB1-205ENST00000417137 PALM2Q8IXS6 379 aa22.6■■□□□ 1.21
SMARCB1-205ENST00000417137 OR10G6Q8NH81 332 aa22.6■■□□□ 1.21
SMARCB1-205ENST00000417137 FBXO25Q8TCJ0 367 aa22.6■■□□□ 1.21
SMARCB1-205ENST00000417137 ASZ1Q8WWH4 475 aa22.6■■□□□ 1.21
SMARCB1-205ENST00000417137 LPGAT1Q92604 370 aa22.6■■□□□ 1.21
SMARCB1-205ENST00000417137 TMEM159Q96B96 161 aa22.6■■□□□ 1.21
SMARCB1-205ENST00000417137 GRAMD1AQ96CP6 724 aa22.6■■□□□ 1.21
SMARCB1-205ENST00000417137 CERS2Q96G23 380 aa22.6■■□□□ 1.21
SMARCB1-205ENST00000417137 C12orf66Q96MD2 445 aa22.6■■□□□ 1.21
SMARCB1-205ENST00000417137 FAM129AQ9BZQ8 928 aa22.6■■□□□ 1.21
SMARCB1-205ENST00000417137 SAYSD1Q9NPB0 183 aa22.6■■□□□ 1.21
SMARCB1-205ENST00000417137 IARS2Q9NSE4 1012 aaKnown RBP22.6■■□□□ 1.21
SMARCB1-205ENST00000417137 FBXO5Q9UKT4 447 aa22.6■■□□□ 1.21
SMARCB1-205ENST00000417137 CRYL1Q9Y2S2 319 aa22.6■■□□□ 1.21
SMARCB1-205ENST00000417137 COLEC10Q9Y6Z7 277 aa22.6■■□□□ 1.21
SMARCB1-205ENST00000417137 TMX2-CTNND1H3BSU7 103 aa22.59■■□□□ 1.21
SMARCB1-205ENST00000417137 ZNF500O60304 480 aaPredicted RBP22.59■■□□□ 1.21
SMARCB1-205ENST00000417137 TOP3BO95985 862 aaKnown RBP22.59■■□□□ 1.21
SMARCB1-205ENST00000417137 APOA4P06727 396 aa22.59■■□□□ 1.21
SMARCB1-205ENST00000417137 ERVK-10P10266 1014 aa22.59■■□□□ 1.21
SMARCB1-205ENST00000417137 NDUFS1P28331 727 aa22.59■■□□□ 1.21
SMARCB1-205ENST00000417137 PPM1FP49593 454 aaPredicted RBP22.59■■□□□ 1.21
SMARCB1-205ENST00000417137 TMED2Q15363 201 aa22.59■■□□□ 1.21
SMARCB1-205ENST00000417137 AMZ1Q400G9 498 aa22.59■■□□□ 1.21
SMARCB1-205ENST00000417137 CAPRIN2Q6IMN6 1127 aaKnown RBP22.59■■□□□ 1.21
SMARCB1-205ENST00000417137 TMEM26Q6ZUK4 368 aa22.59■■□□□ 1.21
SMARCB1-205ENST00000417137 DENND6AQ8IWF6 608 aa22.59■■□□□ 1.21
SMARCB1-205ENST00000417137 LILRA3Q8N6C8 439 aaPredicted RBP22.59■■□□□ 1.21
SMARCB1-205ENST00000417137 DCBLD1Q8N8Z6 715 aa22.59■■□□□ 1.21
SMARCB1-205ENST00000417137 ZFPM2Q8WW38 1151 aa22.59■■□□□ 1.21
SMARCB1-205ENST00000417137 INSM2Q96T92 566 aaPredicted RBP22.59■■□□□ 1.21
SMARCB1-205ENST00000417137 DPYSL5Q9BPU6 564 aa22.59■■□□□ 1.21
SMARCB1-205ENST00000417137 CCDC68Q9H2F9 335 aa22.59■■□□□ 1.21
SMARCB1-205ENST00000417137 EPB41L1Q9H4G0 881 aa22.59■■□□□ 1.21
SMARCB1-205ENST00000417137 SLC40A1Q9NP59 571 aa22.59■■□□□ 1.21
SMARCB1-205ENST00000417137 IMP3Q9NV31 184 aaKnown RBP22.59■■□□□ 1.21
SMARCB1-205ENST00000417137 MSRB2Q9Y3D2 182 aa22.59■■□□□ 1.21
SMARCB1-205ENST00000417137 ARHGEF17Q96PE2 2063 aaPredicted RBP22.59■■□□□ 1.21
SMARCB1-205ENST00000417137 A0A1W2PQM1 296 aa22.58■■□□□ 1.21
SMARCB1-205ENST00000417137 ESYT3A0FGR9 886 aa22.58■■□□□ 1.21
SMARCB1-205ENST00000417137 LILRA5A6NI73 299 aa22.58■■□□□ 1.21
SMARCB1-205ENST00000417137 MTHFD1P11586 935 aaKnown RBP22.58■■□□□ 1.21
SMARCB1-205ENST00000417137 ITGB6P18564 788 aa22.58■■□□□ 1.21
SMARCB1-205ENST00000417137 SLC1A2P43004 574 aa22.58■■□□□ 1.21
SMARCB1-205ENST00000417137 TARDBPQ13148 414 aaKnown RBP eCLIP22.58■■□□□ 1.21
SMARCB1-205ENST00000417137 SQSTM1Q13501 440 aa22.58■■□□□ 1.21
SMARCB1-205ENST00000417137 BOP1Q14137 746 aaKnown RBP22.58■■□□□ 1.21
SMARCB1-205ENST00000417137 BRD3Q15059 726 aa22.58■■□□□ 1.21
SMARCB1-205ENST00000417137 TRADDQ15628 312 aa22.58■■□□□ 1.21
SMARCB1-205ENST00000417137 ZDHHC24Q6UX98 284 aa22.58■■□□□ 1.21
SMARCB1-205ENST00000417137 CCNI2Q6ZMN8 369 aaPredicted RBP22.58■■□□□ 1.21
SMARCB1-205ENST00000417137 KIAA0408Q6ZU52 694 aa22.58■■□□□ 1.21
SMARCB1-205ENST00000417137 CEP128Q6ZU80 1094 aa22.58■■□□□ 1.21
SMARCB1-205ENST00000417137 PIM3Q86V86 326 aa22.58■■□□□ 1.21
SMARCB1-205ENST00000417137 BIRC8Q96P09 236 aa22.58■■□□□ 1.21
SMARCB1-205ENST00000417137 OR52A5Q9H2C5 316 aa22.58■■□□□ 1.21
SMARCB1-205ENST00000417137 KLK13Q9UKR3 277 aa22.58■■□□□ 1.21
SMARCB1-205ENST00000417137 COMMD10Q9Y6G5 202 aa22.58■■□□□ 1.21
SMARCB1-205ENST00000417137 IGHV1OR21-1A0A087WYE8 117 aa22.57■■□□□ 1.2
SMARCB1-205ENST00000417137 SLC5A10A0PJK1 596 aa22.57■■□□□ 1.2
SMARCB1-205ENST00000417137 IQCF5A8MTL0 148 aa22.57■■□□□ 1.2
SMARCB1-205ENST00000417137 CPNE6O95741 557 aa22.57■■□□□ 1.2
SMARCB1-205ENST00000417137 PKMP14618 531 aaKnown RBP22.57■■□□□ 1.2
SMARCB1-205ENST00000417137 SPINK2P20155 84 aa22.57■■□□□ 1.2
SMARCB1-205ENST00000417137 CHRM3P20309 590 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms